RNA–Protein interactions for RNA: ENST00000513364.1

SEL1L3-209, Transcript of SEL1L family member 3, human

TSL 3

Gene SEL1L3, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEL1L3-209	ENST00000513364	BRD4	O60885	1362 aa	Predicted RBP	33.21	■■■□□ 2.91
SEL1L3-209	ENST00000513364	USP6	P35125	1406 aa		33.21	■■■□□ 2.91
SEL1L3-209	ENST00000513364	HAP1	P54257	671 aa	Predicted RBP	33.2	■■■□□ 2.91
SEL1L3-209	ENST00000513364	POTEA	Q6S8J7	498 aa		33.2	■■■□□ 2.91
SEL1L3-209	ENST00000513364	CABLES1	Q8TDN4	633 aa		33.2	■■■□□ 2.91
SEL1L3-209	ENST00000513364	NGLY1	Q96IV0	654 aa		33.19	■■■□□ 2.9
SEL1L3-209	ENST00000513364	PLEKHG5	O94827	1062 aa		33.18	■■■□□ 2.9
SEL1L3-209	ENST00000513364	AKAP12	Q02952	1782 aa		33.18	■■■□□ 2.9
SEL1L3-209	ENST00000513364	CRYBG1	Q9Y4K1	1723 aa		33.16	■■■□□ 2.9
SEL1L3-209	ENST00000513364	CPSF1	Q10570	1443 aa	Known RBP	33.16	■■■□□ 2.9
SEL1L3-209	ENST00000513364	TMF1	P82094	1093 aa		33.15	■■■□□ 2.9
SEL1L3-209	ENST00000513364	ZNF692	Q9BU19	519 aa	Predicted RBP	33.15	■■■□□ 2.9
SEL1L3-209	ENST00000513364	SSH2	Q76I76	1423 aa		33.14	■■■□□ 2.9
SEL1L3-209	ENST00000513364	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.13	■■■□□ 2.89
SEL1L3-209	ENST00000513364	ABTB2	Q8N961	1025 aa		33.12	■■■□□ 2.89
SEL1L3-209	ENST00000513364	TMC1	Q8TDI8	760 aa		33.12	■■■□□ 2.89
SEL1L3-209	ENST00000513364	NINL	Q9Y2I6	1382 aa		33.11	■■■□□ 2.89
SEL1L3-209	ENST00000513364	CD163L1	Q9NR16	1453 aa		33.11	■■■□□ 2.89
SEL1L3-209	ENST00000513364	MON2	Q7Z3U7	1717 aa		33.1	■■■□□ 2.89
SEL1L3-209	ENST00000513364	KTN1	Q86UP2	1357 aa	Known RBP	33.09	■■■□□ 2.89
SEL1L3-209	ENST00000513364	NRK	Q7Z2Y5	1582 aa		33.09	■■■□□ 2.89
SEL1L3-209	ENST00000513364	NUTM2G	Q5VZR2	741 aa		33.09	■■■□□ 2.89
SEL1L3-209	ENST00000513364	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.09	■■■□□ 2.89
SEL1L3-209	ENST00000513364	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
SEL1L3-209	ENST00000513364	SLC12A5	Q9H2X9	1139 aa		33.08	■■■□□ 2.89
SEL1L3-209	ENST00000513364	USP21	Q9UK80	565 aa		33.08	■■■□□ 2.89
SEL1L3-209	ENST00000513364	CDCA8	Q53HL2	280 aa		33.06	■■■□□ 2.88
SEL1L3-209	ENST00000513364	SLIT2	O94813	1529 aa		33.06	■■■□□ 2.88
SEL1L3-209	ENST00000513364	USP19	O94966	1318 aa		33.05	■■■□□ 2.88
SEL1L3-209	ENST00000513364	TTC21B	Q7Z4L5	1316 aa		33.05	■■■□□ 2.88
SEL1L3-209	ENST00000513364	PIK3C2A	O00443	1686 aa		33.05	■■■□□ 2.88
SEL1L3-209	ENST00000513364	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.05	■■■□□ 2.88
SEL1L3-209	ENST00000513364	BCL9L	Q86UU0	1499 aa		33.05	■■■□□ 2.88
SEL1L3-209	ENST00000513364	NLRP13	Q86W25	1043 aa		33.04	■■■□□ 2.88
SEL1L3-209	ENST00000513364	TERF2IP	Q9NYB0	399 aa		33.04	■■■□□ 2.88
SEL1L3-209	ENST00000513364	TTC21A	Q8NDW8	1320 aa		33.03	■■■□□ 2.88
SEL1L3-209	ENST00000513364	HSPA5	P11021	654 aa	Known RBP	33.03	■■■□□ 2.88
SEL1L3-209	ENST00000513364	PLCH1	Q4KWH8	1693 aa		33.02	■■■□□ 2.88
SEL1L3-209	ENST00000513364		A0A1W2PP64	1363 aa		33.02	■■■□□ 2.88
SEL1L3-209	ENST00000513364	QTRT2	Q9H974	415 aa	Known RBP	33.02	■■■□□ 2.88
SEL1L3-209	ENST00000513364	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.02	■■■□□ 2.88
SEL1L3-209	ENST00000513364	NWD2	Q9ULI1	1742 aa		33	■■■□□ 2.87
SEL1L3-209	ENST00000513364	TRPC5	Q9UL62	973 aa	Predicted RBP	33	■■■□□ 2.87
SEL1L3-209	ENST00000513364	ATRN	O75882	1429 aa		33	■■■□□ 2.87
SEL1L3-209	ENST00000513364	COL14A1	Q05707	1796 aa	Known RBP	32.99	■■■□□ 2.87
SEL1L3-209	ENST00000513364	FAM83G	A6ND36	823 aa		32.99	■■■□□ 2.87
SEL1L3-209	ENST00000513364	RXRB	P28702	533 aa		32.99	■■■□□ 2.87
SEL1L3-209	ENST00000513364	EDC4	Q6P2E9	1401 aa	Known RBP	32.99	■■■□□ 2.87
SEL1L3-209	ENST00000513364	NLRP6	P59044	892 aa		32.98	■■■□□ 2.87
SEL1L3-209	ENST00000513364	KIAA0232	Q92628	1395 aa		32.96	■■■□□ 2.87
SEL1L3-209	ENST00000513364	UNC5CL	Q8IV45	518 aa		32.96	■■■□□ 2.87
SEL1L3-209	ENST00000513364	PRDM11	Q9NQV5	511 aa		32.96	■■■□□ 2.87
SEL1L3-209	ENST00000513364	SLIT3	O75094	1523 aa		32.96	■■■□□ 2.87
SEL1L3-209	ENST00000513364	RBM6	P78332	1123 aa	Known RBP	32.95	■■■□□ 2.87
SEL1L3-209	ENST00000513364	ANKRD36B	Q8N2N9	1353 aa		32.95	■■■□□ 2.86
SEL1L3-209	ENST00000513364	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.93	■■■□□ 2.86
SEL1L3-209	ENST00000513364	GC	P02774	474 aa		32.93	■■■□□ 2.86
SEL1L3-209	ENST00000513364	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
SEL1L3-209	ENST00000513364	ZC3H6	P61129	1189 aa	Known RBP	32.92	■■■□□ 2.86
SEL1L3-209	ENST00000513364	CPD	O75976	1380 aa		32.92	■■■□□ 2.86
SEL1L3-209	ENST00000513364	MYOM1	P52179	1685 aa		32.91	■■■□□ 2.86
SEL1L3-209	ENST00000513364	SOCS7	O14512	581 aa		32.91	■■■□□ 2.86
SEL1L3-209	ENST00000513364	NRAP	Q86VF7	1730 aa		32.91	■■■□□ 2.86
SEL1L3-209	ENST00000513364	USP54	Q70EL1	1684 aa		32.89	■■■□□ 2.86
SEL1L3-209	ENST00000513364	USP31	Q70CQ4	1352 aa		32.89	■■■□□ 2.86
SEL1L3-209	ENST00000513364	BTG4	Q9NY30	223 aa		32.89	■■■□□ 2.86
SEL1L3-209	ENST00000513364	NME9	Q86XW9	330 aa		32.87	■■■□□ 2.85
SEL1L3-209	ENST00000513364	CHRNA2	Q15822	529 aa		32.86	■■■□□ 2.85
SEL1L3-209	ENST00000513364	VPS72	Q15906	364 aa		32.85	■■■□□ 2.85
SEL1L3-209	ENST00000513364	GJD4	Q96KN9	370 aa	Predicted RBP	32.85	■■■□□ 2.85
SEL1L3-209	ENST00000513364	KCNH5	Q8NCM2	988 aa		32.84	■■■□□ 2.85
SEL1L3-209	ENST00000513364	RGS12	O14924	1447 aa		32.84	■■■□□ 2.85
SEL1L3-209	ENST00000513364	ZRANB1	Q9UGI0	708 aa		32.83	■■■□□ 2.85
SEL1L3-209	ENST00000513364	LMO7	Q8WWI1	1683 aa		32.82	■■■□□ 2.84
SEL1L3-209	ENST00000513364	GLI3	P10071	1580 aa		32.82	■■■□□ 2.84
SEL1L3-209	ENST00000513364	NFAT5	O94916	1531 aa		32.81	■■■□□ 2.84
SEL1L3-209	ENST00000513364	OVOS2	A0A0J9YW53	1432 aa		32.8	■■■□□ 2.84
SEL1L3-209	ENST00000513364	OVOS2	Q6IE36	1432 aa		32.8	■■■□□ 2.84
SEL1L3-209	ENST00000513364	POLR3GL	Q9BT43	218 aa		32.8	■■■□□ 2.84
SEL1L3-209	ENST00000513364	SOX12	O15370	315 aa		32.77	■■■□□ 2.84
SEL1L3-209	ENST00000513364	CCDC9	Q9Y3X0	531 aa	Known RBP	32.77	■■■□□ 2.84
SEL1L3-209	ENST00000513364	CAMTA1	Q9Y6Y1	1673 aa		32.77	■■■□□ 2.84
SEL1L3-209	ENST00000513364	AATK	Q6ZMQ8	1374 aa		32.76	■■■□□ 2.83
SEL1L3-209	ENST00000513364	ZBTB7C	A1YPR0	619 aa		32.75	■■■□□ 2.83
SEL1L3-209	ENST00000513364	C11orf95	C9JLR9	678 aa	Predicted RBP	32.74	■■■□□ 2.83
SEL1L3-209	ENST00000513364	ARHGEF25	Q86VW2	580 aa		32.74	■■■□□ 2.83
SEL1L3-209	ENST00000513364	NSD3	Q9BZ95	1437 aa		32.72	■■■□□ 2.83
SEL1L3-209	ENST00000513364	CARD14	Q9BXL6	1004 aa		32.72	■■■□□ 2.83
SEL1L3-209	ENST00000513364	STRN4	Q9NRL3	753 aa		32.72	■■■□□ 2.83
SEL1L3-209	ENST00000513364	COL18A1	P39060	1754 aa		32.72	■■■□□ 2.83
SEL1L3-209	ENST00000513364	COG3	Q96JB2	828 aa		32.71	■■■□□ 2.83
SEL1L3-209	ENST00000513364	COL5A2	P05997	1499 aa	Predicted RBP	32.71	■■■□□ 2.83
SEL1L3-209	ENST00000513364	SPATA31A5	Q5VU36	1347 aa		32.71	■■■□□ 2.83
SEL1L3-209	ENST00000513364	SPATA31A7	Q8IWB4	1347 aa		32.71	■■■□□ 2.83
SEL1L3-209	ENST00000513364	ABCC6	O95255	1503 aa		32.7	■■■□□ 2.83
SEL1L3-209	ENST00000513364	KIF20B	Q96Q89	1820 aa		32.7	■■■□□ 2.82
SEL1L3-209	ENST00000513364	EVA1C	P58658	441 aa		32.69	■■■□□ 2.82
SEL1L3-209	ENST00000513364	FYB1	O15117	783 aa		32.68	■■■□□ 2.82
SEL1L3-209	ENST00000513364	KIF7	Q2M1P5	1343 aa		32.67	■■■□□ 2.82
SEL1L3-209	ENST00000513364	GGNBP2	Q9H3C7	697 aa		32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms