RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 ACEP12821 1306 aa27.9■■■□□ 2.06
CCHCR1-230ENST00000513222 GLI3P10071 1580 aa27.88■■■□□ 2.05
CCHCR1-230ENST00000513222 BRD4O60885 1362 aaPredicted RBP27.87■■■□□ 2.05
CCHCR1-230ENST00000513222 COL14A1Q05707 1796 aaKnown RBP27.87■■■□□ 2.05
CCHCR1-230ENST00000513222 LMOD2Q6P5Q4 547 aa27.87■■■□□ 2.05
CCHCR1-230ENST00000513222 FAM83GA6ND36 823 aa27.86■■■□□ 2.05
CCHCR1-230ENST00000513222 NRAPQ86VF7 1730 aa27.86■■■□□ 2.05
CCHCR1-230ENST00000513222 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
CCHCR1-230ENST00000513222 PPIP5K1Q6PFW1 1433 aa27.84■■■□□ 2.05
CCHCR1-230ENST00000513222 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
CCHCR1-230ENST00000513222 HAP1P54257 671 aaPredicted RBP27.84■■■□□ 2.05
CCHCR1-230ENST00000513222 VPS72Q15906 364 aa27.84■■■□□ 2.05
CCHCR1-230ENST00000513222 PHRF1Q9P1Y6 1649 aaKnown RBP27.83■■■□□ 2.05
CCHCR1-230ENST00000513222 ONECUT3O60422 494 aaPredicted RBP27.83■■■□□ 2.05
CCHCR1-230ENST00000513222 SRPK2P78362 688 aaKnown RBP27.83■■■□□ 2.05
CCHCR1-230ENST00000513222 CABP2Q9NPB3 220 aa27.82■■■□□ 2.04
CCHCR1-230ENST00000513222 EVC2Q86UK5 1308 aa27.82■■■□□ 2.04
CCHCR1-230ENST00000513222 TONSLQ96HA7 1378 aa27.81■■■□□ 2.04
CCHCR1-230ENST00000513222 PAK3O75914 559 aaPredicted RBP27.8■■■□□ 2.04
CCHCR1-230ENST00000513222 SSH2Q76I76 1423 aa27.78■■■□□ 2.04
CCHCR1-230ENST00000513222 EP400Q96L91 3159 aa27.78■■■□□ 2.04
CCHCR1-230ENST00000513222 ATAD2Q6PL18 1390 aa27.77■■■□□ 2.04
CCHCR1-230ENST00000513222 BRWD3Q6RI45 1802 aa27.76■■■□□ 2.04
CCHCR1-230ENST00000513222 USP19O94966 1318 aa27.76■■■□□ 2.03
CCHCR1-230ENST00000513222 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
CCHCR1-230ENST00000513222 AKAP12Q02952 1782 aa27.76■■■□□ 2.03
CCHCR1-230ENST00000513222 USP6P35125 1406 aa27.75■■■□□ 2.03
CCHCR1-230ENST00000513222 CARD11Q9BXL7 1154 aa27.73■■■□□ 2.03
CCHCR1-230ENST00000513222 NRKQ7Z2Y5 1582 aa27.73■■■□□ 2.03
CCHCR1-230ENST00000513222 BTG4Q9NY30 223 aa27.72■■■□□ 2.03
CCHCR1-230ENST00000513222 CPDO75976 1380 aa27.72■■■□□ 2.03
CCHCR1-230ENST00000513222 ABTB2Q8N961 1025 aa27.71■■■□□ 2.03
CCHCR1-230ENST00000513222 CPSF1Q10570 1443 aaKnown RBP27.7■■■□□ 2.03
CCHCR1-230ENST00000513222 ZNF692Q9BU19 519 aaPredicted RBP27.7■■■□□ 2.02
CCHCR1-230ENST00000513222 KIAA0232Q92628 1395 aa27.7■■■□□ 2.02
CCHCR1-230ENST00000513222 PLEKHG5O94827 1062 aa27.69■■■□□ 2.02
CCHCR1-230ENST00000513222 PUS7Q96PZ0 661 aaKnown RBP27.69■■■□□ 2.02
CCHCR1-230ENST00000513222 LMO7Q8WWI1 1683 aa27.68■■■□□ 2.02
CCHCR1-230ENST00000513222 NLRP13Q86W25 1043 aa27.68■■■□□ 2.02
CCHCR1-230ENST00000513222 PRDM11Q9NQV5 511 aa27.68■■■□□ 2.02
CCHCR1-230ENST00000513222 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
CCHCR1-230ENST00000513222 PIK3C2AO00443 1686 aa27.67■■■□□ 2.02
CCHCR1-230ENST00000513222 CCDC125Q86Z20 511 aa27.66■■■□□ 2.02
CCHCR1-230ENST00000513222 SLIT3O75094 1523 aa27.66■■■□□ 2.02
CCHCR1-230ENST00000513222 SPATA31A5Q5VU36 1347 aa27.66■■■□□ 2.02
CCHCR1-230ENST00000513222 SPATA31A7Q8IWB4 1347 aa27.66■■■□□ 2.02
CCHCR1-230ENST00000513222 MON2Q7Z3U7 1717 aa27.65■■■□□ 2.02
CCHCR1-230ENST00000513222 SEPT12Q8IYM1 358 aa27.65■■■□□ 2.02
CCHCR1-230ENST00000513222 NUTM2GQ5VZR2 741 aa27.64■■■□□ 2.02
CCHCR1-230ENST00000513222 TIMELESSQ9UNS1 1208 aa27.64■■■□□ 2.02
CCHCR1-230ENST00000513222 GCP02774 474 aa27.63■■■□□ 2.01
CCHCR1-230ENST00000513222 THSD7AQ9UPZ6 1657 aa27.62■■■□□ 2.01
CCHCR1-230ENST00000513222 CAMTA1Q9Y6Y1 1673 aa27.62■■■□□ 2.01
CCHCR1-230ENST00000513222 ZC3H6P61129 1189 aaKnown RBP27.6■■■□□ 2.01
CCHCR1-230ENST00000513222 TESK2Q96S53 571 aa27.6■■■□□ 2.01
CCHCR1-230ENST00000513222 TTC21AQ8NDW8 1320 aa27.6■■■□□ 2.01
CCHCR1-230ENST00000513222 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
CCHCR1-230ENST00000513222 CD163L1Q9NR16 1453 aa27.59■■■□□ 2.01
CCHCR1-230ENST00000513222 SLC24A1O60721 1099 aa27.59■■■□□ 2.01
CCHCR1-230ENST00000513222 TTC21BQ7Z4L5 1316 aa27.59■■■□□ 2.01
CCHCR1-230ENST00000513222 COL18A1P39060 1754 aa27.58■■■□□ 2.01
CCHCR1-230ENST00000513222 CHRNA2Q15822 529 aa27.58■■■□□ 2.01
CCHCR1-230ENST00000513222 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
CCHCR1-230ENST00000513222 SPATA31A1Q5TZJ5 1347 aa27.58■■■□□ 2.01
CCHCR1-230ENST00000513222 NLRP6P59044 892 aa27.57■■■□□ 2
CCHCR1-230ENST00000513222 FAM98CQ17RN3 349 aaKnown RBP27.54■■■□□ 2
CCHCR1-230ENST00000513222 AATKQ6ZMQ8 1374 aa27.54■■■□□ 2
CCHCR1-230ENST00000513222 KRT27Q7Z3Y8 459 aa27.54■■■□□ 2
CCHCR1-230ENST00000513222 KTN1Q86UP2 1357 aaKnown RBP27.54■■■□□ 2
CCHCR1-230ENST00000513222 BLMP54132 1417 aaPredicted RBP27.53■■■□□ 2
CCHCR1-230ENST00000513222 ST20-MTHFSA0A0A6YYL1 179 aa27.52■■■□□ 2
CCHCR1-230ENST00000513222 USP31Q70CQ4 1352 aa27.51■■□□□ 1.99
CCHCR1-230ENST00000513222 BARGINQ6ZT62 677 aa27.51■■□□□ 1.99
CCHCR1-230ENST00000513222 COL5A2P05997 1499 aaPredicted RBP27.51■■□□□ 1.99
CCHCR1-230ENST00000513222 NINLQ9Y2I6 1382 aa27.5■■□□□ 1.99
CCHCR1-230ENST00000513222 KCNH5Q8NCM2 988 aa27.49■■□□□ 1.99
CCHCR1-230ENST00000513222 NFAT5O94916 1531 aa27.48■■□□□ 1.99
CCHCR1-230ENST00000513222 SLC12A5Q9H2X9 1139 aa27.48■■□□□ 1.99
CCHCR1-230ENST00000513222 ARHGEF25Q86VW2 580 aa27.47■■□□□ 1.99
CCHCR1-230ENST00000513222 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
CCHCR1-230ENST00000513222 ABCC6O95255 1503 aa27.46■■□□□ 1.99
CCHCR1-230ENST00000513222 STRN4Q9NRL3 753 aa27.46■■□□□ 1.99
CCHCR1-230ENST00000513222 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
CCHCR1-230ENST00000513222 EVA1CP58658 441 aa27.45■■□□□ 1.98
CCHCR1-230ENST00000513222 LARP1Q6PKG0 1096 aaKnown RBP27.45■■□□□ 1.98
CCHCR1-230ENST00000513222 RGPD5Q99666 1765 aa27.44■■□□□ 1.98
CCHCR1-230ENST00000513222 USP47Q96K76 1375 aa27.44■■□□□ 1.98
CCHCR1-230ENST00000513222 TERF2IPQ9NYB0 399 aa27.43■■□□□ 1.98
CCHCR1-230ENST00000513222 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
CCHCR1-230ENST00000513222 CRB1P82279 1406 aa27.42■■□□□ 1.98
CCHCR1-230ENST00000513222 HDGFL2Q7Z4V5 671 aaPredicted RBP27.42■■□□□ 1.98
CCHCR1-230ENST00000513222 TCP11L2Q8N4U5 519 aa27.42■■□□□ 1.98
CCHCR1-230ENST00000513222 A0A1W2PP64 1363 aa27.42■■□□□ 1.98
CCHCR1-230ENST00000513222 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
CCHCR1-230ENST00000513222 TMC1Q8TDI8 760 aa27.4■■□□□ 1.98
CCHCR1-230ENST00000513222 AXIN2Q9Y2T1 843 aa27.4■■□□□ 1.98
CCHCR1-230ENST00000513222 RGPD1P0DJD0 1748 aa27.4■■□□□ 1.98
CCHCR1-230ENST00000513222 A0A0G2JS52 829 aa27.36■■□□□ 1.97
CCHCR1-230ENST00000513222 MYT1Q01538 1121 aa27.36■■□□□ 1.97
CCHCR1-230ENST00000513222 WNK3Q9BYP7 1800 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms