RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
HMGCL-209ENST00000513148 PNPLA6Q8IY17 1366 aa22.84■■□□□ 1.25
HMGCL-209ENST00000513148 A0A1W2PP64 1363 aa22.83■■□□□ 1.25
HMGCL-209ENST00000513148 KTN1Q86UP2 1357 aaKnown RBP22.83■■□□□ 1.25
HMGCL-209ENST00000513148 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
HMGCL-209ENST00000513148 ALS2Q96Q42 1657 aa22.83■■□□□ 1.25
HMGCL-209ENST00000513148 HDGFL2Q7Z4V5 671 aaPredicted RBP22.82■■□□□ 1.24
HMGCL-209ENST00000513148 TERF2IPQ9NYB0 399 aa22.82■■□□□ 1.24
HMGCL-209ENST00000513148 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
HMGCL-209ENST00000513148 NRKQ7Z2Y5 1582 aa22.81■■□□□ 1.24
HMGCL-209ENST00000513148 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
HMGCL-209ENST00000513148 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
HMGCL-209ENST00000513148 ANKRD36BQ8N2N9 1353 aa22.79■■□□□ 1.24
HMGCL-209ENST00000513148 NUTM2BA6NNL0 878 aaPredicted RBP22.79■■□□□ 1.24
HMGCL-209ENST00000513148 NUTM2EB1AL46 878 aaPredicted RBP22.79■■□□□ 1.24
HMGCL-209ENST00000513148 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
HMGCL-209ENST00000513148 NUTM2AQ8IVF1 878 aaPredicted RBP22.79■■□□□ 1.24
HMGCL-209ENST00000513148 ARHGEF10O15013 1369 aa22.78■■□□□ 1.24
HMGCL-209ENST00000513148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.77■■□□□ 1.24
HMGCL-209ENST00000513148 SSH2Q76I76 1423 aa22.77■■□□□ 1.23
HMGCL-209ENST00000513148 ABTB2Q8N961 1025 aa22.76■■□□□ 1.23
HMGCL-209ENST00000513148 PIK3C2AO00443 1686 aa22.76■■□□□ 1.23
HMGCL-209ENST00000513148 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
HMGCL-209ENST00000513148 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
HMGCL-209ENST00000513148 TTC21BQ7Z4L5 1316 aa22.76■■□□□ 1.23
HMGCL-209ENST00000513148 SPATA31A6Q5VVP1 1343 aa22.75■■□□□ 1.23
HMGCL-209ENST00000513148 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
HMGCL-209ENST00000513148 LRP6O75581 1613 aa22.74■■□□□ 1.23
HMGCL-209ENST00000513148 ABCA3Q99758 1704 aa22.74■■□□□ 1.23
HMGCL-209ENST00000513148 EDC4Q6P2E9 1401 aaKnown RBP22.74■■□□□ 1.23
HMGCL-209ENST00000513148 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
HMGCL-209ENST00000513148 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
HMGCL-209ENST00000513148 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
HMGCL-209ENST00000513148 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
HMGCL-209ENST00000513148 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
HMGCL-209ENST00000513148 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
HMGCL-209ENST00000513148 NME9Q86XW9 330 aa22.7■■□□□ 1.22
HMGCL-209ENST00000513148 NSD3Q9BZ95 1437 aa22.7■■□□□ 1.22
HMGCL-209ENST00000513148 PHRF1Q9P1Y6 1649 aaKnown RBP22.7■■□□□ 1.22
HMGCL-209ENST00000513148 NLRP6P59044 892 aa22.69■■□□□ 1.22
HMGCL-209ENST00000513148 PANK3Q9H999 370 aa22.69■■□□□ 1.22
HMGCL-209ENST00000513148 MEX3CQ5U5Q3 659 aaKnown RBP22.69■■□□□ 1.22
HMGCL-209ENST00000513148 CARD14Q9BXL6 1004 aa22.69■■□□□ 1.22
HMGCL-209ENST00000513148 ZRANB1Q9UGI0 708 aa22.68■■□□□ 1.22
HMGCL-209ENST00000513148 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
HMGCL-209ENST00000513148 NLRP13Q86W25 1043 aa22.67■■□□□ 1.22
HMGCL-209ENST00000513148 KIF20BQ96Q89 1820 aa22.66■■□□□ 1.22
HMGCL-209ENST00000513148 SOX12O15370 315 aa22.64■■□□□ 1.21
HMGCL-209ENST00000513148 USP19O94966 1318 aa22.63■■□□□ 1.21
HMGCL-209ENST00000513148 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
HMGCL-209ENST00000513148 USP54Q70EL1 1684 aa22.61■■□□□ 1.21
HMGCL-209ENST00000513148 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
HMGCL-209ENST00000513148 SLIT3O75094 1523 aa22.6■■□□□ 1.21
HMGCL-209ENST00000513148 FYB1O15117 783 aa22.6■■□□□ 1.21
HMGCL-209ENST00000513148 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
HMGCL-209ENST00000513148 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
HMGCL-209ENST00000513148 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
HMGCL-209ENST00000513148 USP31Q70CQ4 1352 aa22.59■■□□□ 1.21
HMGCL-209ENST00000513148 GCP02774 474 aa22.59■■□□□ 1.21
HMGCL-209ENST00000513148 CGNL1Q0VF96 1302 aa22.59■■□□□ 1.21
HMGCL-209ENST00000513148 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
HMGCL-209ENST00000513148 ZBTB7CA1YPR0 619 aa22.58■■□□□ 1.2
HMGCL-209ENST00000513148 COG3Q96JB2 828 aa22.58■■□□□ 1.2
HMGCL-209ENST00000513148 NGLY1Q96IV0 654 aa22.57■■□□□ 1.2
HMGCL-209ENST00000513148 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
HMGCL-209ENST00000513148 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
HMGCL-209ENST00000513148 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
HMGCL-209ENST00000513148 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
HMGCL-209ENST00000513148 PRDM11Q9NQV5 511 aa22.55■■□□□ 1.2
HMGCL-209ENST00000513148 NFAT5O94916 1531 aa22.55■■□□□ 1.2
HMGCL-209ENST00000513148 CHRNA2Q15822 529 aa22.54■■□□□ 1.2
HMGCL-209ENST00000513148 AFF2P51816 1311 aa22.54■■□□□ 1.2
HMGCL-209ENST00000513148 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
HMGCL-209ENST00000513148 KCNH5Q8NCM2 988 aa22.53■■□□□ 1.2
HMGCL-209ENST00000513148 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
HMGCL-209ENST00000513148 CNGB1Q14028 1251 aaPredicted RBP22.53■■□□□ 1.2
HMGCL-209ENST00000513148 COL14A1Q05707 1796 aaKnown RBP22.53■■□□□ 1.2
HMGCL-209ENST00000513148 LTN1O94822 1766 aa22.52■■□□□ 1.2
HMGCL-209ENST00000513148 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
HMGCL-209ENST00000513148 FBLN1P23142 703 aa22.51■■□□□ 1.19
HMGCL-209ENST00000513148 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
HMGCL-209ENST00000513148 CPDO75976 1380 aa22.5■■□□□ 1.19
HMGCL-209ENST00000513148 AMER1Q5JTC6 1135 aaPredicted RBP22.48■■□□□ 1.19
HMGCL-209ENST00000513148 SLIT2O94813 1529 aa22.48■■□□□ 1.19
HMGCL-209ENST00000513148 TNNT2P45379 298 aaPredicted RBP22.48■■□□□ 1.19
HMGCL-209ENST00000513148 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
HMGCL-209ENST00000513148 BTG4Q9NY30 223 aa22.48■■□□□ 1.19
HMGCL-209ENST00000513148 USP21Q9UK80 565 aa22.48■■□□□ 1.19
HMGCL-209ENST00000513148 NWD2Q9ULI1 1742 aa22.48■■□□□ 1.19
HMGCL-209ENST00000513148 NSD2O96028 1365 aa22.47■■□□□ 1.19
HMGCL-209ENST00000513148 RGS17Q9UGC6 210 aaPredicted RBP22.47■■□□□ 1.19
HMGCL-209ENST00000513148 ARHGEF25Q86VW2 580 aa22.47■■□□□ 1.19
HMGCL-209ENST00000513148 FNBP4Q8N3X1 1017 aaPredicted RBP22.47■■□□□ 1.19
HMGCL-209ENST00000513148 LMO7Q8WWI1 1683 aa22.46■■□□□ 1.19
HMGCL-209ENST00000513148 BCL9LQ86UU0 1499 aa22.46■■□□□ 1.19
HMGCL-209ENST00000513148 NRAPQ86VF7 1730 aa22.45■■□□□ 1.19
HMGCL-209ENST00000513148 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
HMGCL-209ENST00000513148 RGPD5Q99666 1765 aa22.45■■□□□ 1.18
HMGCL-209ENST00000513148 COL18A1P39060 1754 aa22.44■■□□□ 1.18
HMGCL-209ENST00000513148 ZNF772Q68DY9 489 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms