RNA–Protein interactions for RNA: ENST00000512553.5

ITGA3-213, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-213ENST00000512553 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
ITGA3-213ENST00000512553 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
ITGA3-213ENST00000512553 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
ITGA3-213ENST00000512553 VPS72Q15906 364 aa13.46□□□□□ -0.25
ITGA3-213ENST00000512553 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
ITGA3-213ENST00000512553 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
ITGA3-213ENST00000512553 CCDC125Q86Z20 511 aa13.45□□□□□ -0.26
ITGA3-213ENST00000512553 CABLES1Q8TDN4 633 aa13.45□□□□□ -0.26
ITGA3-213ENST00000512553 BRWD3Q6RI45 1802 aa13.45□□□□□ -0.26
ITGA3-213ENST00000512553 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
ITGA3-213ENST00000512553 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
ITGA3-213ENST00000512553 ACEP12821 1306 aa13.43□□□□□ -0.26
ITGA3-213ENST00000512553 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
ITGA3-213ENST00000512553 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
ITGA3-213ENST00000512553 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
ITGA3-213ENST00000512553 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
ITGA3-213ENST00000512553 NRKQ7Z2Y5 1582 aa13.42□□□□□ -0.26
ITGA3-213ENST00000512553 EP400Q96L91 3159 aa13.42□□□□□ -0.26
ITGA3-213ENST00000512553 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
ITGA3-213ENST00000512553 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
ITGA3-213ENST00000512553 FAM83GA6ND36 823 aa13.4□□□□□ -0.26
ITGA3-213ENST00000512553 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
ITGA3-213ENST00000512553 USP6P35125 1406 aa13.39□□□□□ -0.27
ITGA3-213ENST00000512553 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
ITGA3-213ENST00000512553 CPDO75976 1380 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 KIAA0232Q92628 1395 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
ITGA3-213ENST00000512553 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 ABTB2Q8N961 1025 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 USP19O94966 1318 aa13.38□□□□□ -0.27
ITGA3-213ENST00000512553 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
ITGA3-213ENST00000512553 RGPD1P0DJD0 1748 aa13.37□□□□□ -0.27
ITGA3-213ENST00000512553 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
ITGA3-213ENST00000512553 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 A0A0G2JS52 829 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 MYT1Q01538 1121 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 SF3B2Q13435 895 aaKnown RBP13.36□□□□□ -0.27
ITGA3-213ENST00000512553 LMO7Q8WWI1 1683 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
ITGA3-213ENST00000512553 SLIT3O75094 1523 aa13.35□□□□□ -0.27
ITGA3-213ENST00000512553 PIK3C2AO00443 1686 aa13.35□□□□□ -0.27
ITGA3-213ENST00000512553 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
ITGA3-213ENST00000512553 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
ITGA3-213ENST00000512553 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
ITGA3-213ENST00000512553 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
ITGA3-213ENST00000512553 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
ITGA3-213ENST00000512553 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
ITGA3-213ENST00000512553 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
ITGA3-213ENST00000512553 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
ITGA3-213ENST00000512553 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.28
ITGA3-213ENST00000512553 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
ITGA3-213ENST00000512553 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
ITGA3-213ENST00000512553 ABCC6O95255 1503 aa13.32□□□□□ -0.28
ITGA3-213ENST00000512553 SPATA31A1Q5TZJ5 1347 aa13.32□□□□□ -0.28
ITGA3-213ENST00000512553 GCP02774 474 aa13.31□□□□□ -0.28
ITGA3-213ENST00000512553 EVA1CP58658 441 aa13.31□□□□□ -0.28
ITGA3-213ENST00000512553 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
ITGA3-213ENST00000512553 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
ITGA3-213ENST00000512553 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
ITGA3-213ENST00000512553 NLRP6P59044 892 aa13.3□□□□□ -0.28
ITGA3-213ENST00000512553 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
ITGA3-213ENST00000512553 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
ITGA3-213ENST00000512553 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
ITGA3-213ENST00000512553 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
ITGA3-213ENST00000512553 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
ITGA3-213ENST00000512553 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
ITGA3-213ENST00000512553 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
ITGA3-213ENST00000512553 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
ITGA3-213ENST00000512553 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
ITGA3-213ENST00000512553 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
ITGA3-213ENST00000512553 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
ITGA3-213ENST00000512553 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
ITGA3-213ENST00000512553 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
ITGA3-213ENST00000512553 BAG6P46379 1132 aa13.28□□□□□ -0.28
ITGA3-213ENST00000512553 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
ITGA3-213ENST00000512553 CRB1P82279 1406 aa13.28□□□□□ -0.28
ITGA3-213ENST00000512553 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
ITGA3-213ENST00000512553 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
ITGA3-213ENST00000512553 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
ITGA3-213ENST00000512553 COL18A1P39060 1754 aa13.27□□□□□ -0.29
ITGA3-213ENST00000512553 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
ITGA3-213ENST00000512553 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
ITGA3-213ENST00000512553 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
ITGA3-213ENST00000512553 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
ITGA3-213ENST00000512553 NFAT5O94916 1531 aa13.25□□□□□ -0.29
ITGA3-213ENST00000512553 LTN1O94822 1766 aa13.25□□□□□ -0.29
ITGA3-213ENST00000512553 PDE3BQ13370 1112 aa13.24□□□□□ -0.29
ITGA3-213ENST00000512553 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
ITGA3-213ENST00000512553 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
ITGA3-213ENST00000512553 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
ITGA3-213ENST00000512553 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
ITGA3-213ENST00000512553 PARD3Q8TEW0 1356 aa13.23□□□□□ -0.29
ITGA3-213ENST00000512553 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms