RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
MSH3-203ENST00000512531 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
MSH3-203ENST00000512531 KIF1BO60333 1816 aa13.15□□□□□ -0.3
MSH3-203ENST00000512531 PYGBP11216 843 aa13.14□□□□□ -0.31
MSH3-203ENST00000512531 C8orf37Q96NL8 207 aa13.14□□□□□ -0.31
MSH3-203ENST00000512531 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
MSH3-203ENST00000512531 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
MSH3-203ENST00000512531 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
MSH3-203ENST00000512531 RGS12O14924 1447 aa13.13□□□□□ -0.31
MSH3-203ENST00000512531 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
MSH3-203ENST00000512531 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
MSH3-203ENST00000512531 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
MSH3-203ENST00000512531 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
MSH3-203ENST00000512531 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
MSH3-203ENST00000512531 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
MSH3-203ENST00000512531 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
MSH3-203ENST00000512531 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
MSH3-203ENST00000512531 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
MSH3-203ENST00000512531 USP21Q9UK80 565 aa13.08□□□□□ -0.32
MSH3-203ENST00000512531 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
MSH3-203ENST00000512531 CDC42BPGQ6DT37 1551 aa13.07□□□□□ -0.32
MSH3-203ENST00000512531 ATRNO75882 1429 aa13.07□□□□□ -0.32
MSH3-203ENST00000512531 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
MSH3-203ENST00000512531 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
MSH3-203ENST00000512531 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
MSH3-203ENST00000512531 TECPR2O15040 1411 aa13.06□□□□□ -0.32
MSH3-203ENST00000512531 MYOM2P54296 1465 aa13.06□□□□□ -0.32
MSH3-203ENST00000512531 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
MSH3-203ENST00000512531 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
MSH3-203ENST00000512531 PPLO60437 1756 aa13.06□□□□□ -0.32
MSH3-203ENST00000512531 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
MSH3-203ENST00000512531 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
MSH3-203ENST00000512531 PXDNQ92626 1479 aa13.04□□□□□ -0.32
MSH3-203ENST00000512531 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
MSH3-203ENST00000512531 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
MSH3-203ENST00000512531 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.33
MSH3-203ENST00000512531 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
MSH3-203ENST00000512531 BCL9LQ86UU0 1499 aa13.02□□□□□ -0.33
MSH3-203ENST00000512531 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
MSH3-203ENST00000512531 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
MSH3-203ENST00000512531 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
MSH3-203ENST00000512531 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
MSH3-203ENST00000512531 STAC3Q96MF2 364 aa13□□□□□ -0.33
MSH3-203ENST00000512531 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
MSH3-203ENST00000512531 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
MSH3-203ENST00000512531 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
MSH3-203ENST00000512531 FOXO3O43524 673 aa12.99□□□□□ -0.33
MSH3-203ENST00000512531 GJD4Q96KN9 370 aaPredicted RBP12.99□□□□□ -0.33
MSH3-203ENST00000512531 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
MSH3-203ENST00000512531 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
MSH3-203ENST00000512531 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
MSH3-203ENST00000512531 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
MSH3-203ENST00000512531 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
MSH3-203ENST00000512531 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
MSH3-203ENST00000512531 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
MSH3-203ENST00000512531 SLIT2O94813 1529 aa12.97□□□□□ -0.33
MSH3-203ENST00000512531 PIK3C2GO75747 1445 aa12.96□□□□□ -0.33
MSH3-203ENST00000512531 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
MSH3-203ENST00000512531 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
MSH3-203ENST00000512531 IFT172Q9UG01 1749 aa12.96□□□□□ -0.34
MSH3-203ENST00000512531 USP47Q96K76 1375 aa12.95□□□□□ -0.34
MSH3-203ENST00000512531 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
MSH3-203ENST00000512531 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
MSH3-203ENST00000512531 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
MSH3-203ENST00000512531 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
MSH3-203ENST00000512531 PSME1Q06323 249 aa12.94□□□□□ -0.34
MSH3-203ENST00000512531 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
MSH3-203ENST00000512531 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
MSH3-203ENST00000512531 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
MSH3-203ENST00000512531 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
MSH3-203ENST00000512531 EP400Q96L91 3159 aa12.93□□□□□ -0.34
MSH3-203ENST00000512531 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
MSH3-203ENST00000512531 NBPF8Q3BBV2 869 aa12.93□□□□□ -0.34
MSH3-203ENST00000512531 KRT28Q7Z3Y7 464 aa12.93□□□□□ -0.34
MSH3-203ENST00000512531 STK26Q9P289 416 aa12.93□□□□□ -0.34
MSH3-203ENST00000512531 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
MSH3-203ENST00000512531 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
MSH3-203ENST00000512531 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
MSH3-203ENST00000512531 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
MSH3-203ENST00000512531 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
MSH3-203ENST00000512531 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
MSH3-203ENST00000512531 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
MSH3-203ENST00000512531 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 NEFLP07196 543 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 VPS72Q15906 364 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
MSH3-203ENST00000512531 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
MSH3-203ENST00000512531 GLI3P10071 1580 aa12.9□□□□□ -0.34
MSH3-203ENST00000512531 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
MSH3-203ENST00000512531 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
MSH3-203ENST00000512531 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
MSH3-203ENST00000512531 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
MSH3-203ENST00000512531 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
MSH3-203ENST00000512531 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
MSH3-203ENST00000512531 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
MSH3-203ENST00000512531 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms