RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
COL6A5-204ENST00000512482 PCDHB15Q9Y5E8 787 aa6.6□□□□□ -1.35
COL6A5-204ENST00000512482 GTF3C3Q9Y5Q9 886 aa6.6□□□□□ -1.35
COL6A5-204ENST00000512482 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 WIPF1O43516 503 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 CLK2P49760 499 aaKnown RBP6.59□□□□□ -1.35
COL6A5-204ENST00000512482 PRPF38BQ5VTL8 546 aaKnown RBP6.59□□□□□ -1.35
COL6A5-204ENST00000512482 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 NUDT12Q9BQG2 462 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 ZBTB3Q9H5J0 574 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 LIMD1Q9UGP4 676 aa6.59□□□□□ -1.35
COL6A5-204ENST00000512482 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
COL6A5-204ENST00000512482 SNRPBP14678 240 aaKnown RBP6.58□□□□□ -1.36
COL6A5-204ENST00000512482 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
COL6A5-204ENST00000512482 TERTO14746 1132 aaKnown RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 SIAH2O43255 324 aa6.57□□□□□ -1.36
COL6A5-204ENST00000512482 HRCP23327 699 aa6.57□□□□□ -1.36
COL6A5-204ENST00000512482 GOPCQ9HD26 462 aa6.57□□□□□ -1.36
COL6A5-204ENST00000512482 NUTM2BA6NNL0 878 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 NUTM2EB1AL46 878 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
COL6A5-204ENST00000512482 INSM1Q01101 510 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 NUTM2DQ5VT03 806 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 PTCRAQ6ISU1 281 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 NUTM2AQ8IVF1 878 aaPredicted RBP6.57□□□□□ -1.36
COL6A5-204ENST00000512482 LILRB3O75022 631 aa6.56□□□□□ -1.36
COL6A5-204ENST00000512482 EHBP1Q8NDI1 1231 aa6.56□□□□□ -1.36
COL6A5-204ENST00000512482 PRR7Q8TB68 274 aa6.56□□□□□ -1.36
COL6A5-204ENST00000512482 STK17AQ9UEE5 414 aa6.56□□□□□ -1.36
COL6A5-204ENST00000512482 CCNYL3P0C7X3 344 aa6.55□□□□□ -1.36
COL6A5-204ENST00000512482 PTPRNQ16849 979 aa6.55□□□□□ -1.36
COL6A5-204ENST00000512482 PROCA1Q8NCQ7 364 aaPredicted RBP6.55□□□□□ -1.36
COL6A5-204ENST00000512482 CABLES1Q8TDN4 633 aa6.55□□□□□ -1.36
COL6A5-204ENST00000512482 QPCTQ16769 361 aa6.54□□□□□ -1.36
COL6A5-204ENST00000512482 DESI1Q6ICB0 168 aa6.54□□□□□ -1.36
COL6A5-204ENST00000512482 PCMTD1Q96MG8 357 aaPredicted RBP6.54□□□□□ -1.36
COL6A5-204ENST00000512482 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
COL6A5-204ENST00000512482 SH3BP2P78314 561 aa6.54□□□□□ -1.36
COL6A5-204ENST00000512482 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.54□□□□□ -1.36
COL6A5-204ENST00000512482 WASF2Q9Y6W5 498 aa6.54□□□□□ -1.36
COL6A5-204ENST00000512482 KCNH2Q12809 1159 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 RTL5Q5HYW3 569 aaPredicted RBP6.52□□□□□ -1.37
COL6A5-204ENST00000512482 PODXL2Q9NZ53 605 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 CAPN5O15484 640 aaPredicted RBP6.52□□□□□ -1.37
COL6A5-204ENST00000512482 PPP2R2DQ66LE6 453 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 MPNDQ8N594 471 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
COL6A5-204ENST00000512482 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
COL6A5-204ENST00000512482 SLC16A10Q8TF71 515 aa6.51□□□□□ -1.37
COL6A5-204ENST00000512482 TSC1Q92574 1164 aa6.51□□□□□ -1.37
COL6A5-204ENST00000512482 VARSP26640 1264 aaKnown RBP6.5□□□□□ -1.37
COL6A5-204ENST00000512482 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
COL6A5-204ENST00000512482 TRIM46Q7Z4K8 759 aa6.5□□□□□ -1.37
COL6A5-204ENST00000512482 NPAS3Q8IXF0 933 aa6.5□□□□□ -1.37
COL6A5-204ENST00000512482 HELBQ8NG08 1087 aaPredicted RBP6.5□□□□□ -1.37
COL6A5-204ENST00000512482 BAP1Q92560 729 aa6.5□□□□□ -1.37
COL6A5-204ENST00000512482 NXF1Q9UBU9 619 aaKnown RBP6.5□□□□□ -1.37
COL6A5-204ENST00000512482 LINC01559Q495D7 138 aa6.48□□□□□ -1.37
COL6A5-204ENST00000512482 ZNF511Q8NB15 262 aa6.48□□□□□ -1.37
COL6A5-204ENST00000512482 FBXO31Q5XUX0 539 aaPredicted RBP6.47□□□□□ -1.37
COL6A5-204ENST00000512482 BMP1P13497 986 aa6.46□□□□□ -1.37
COL6A5-204ENST00000512482 CTHP32929 405 aa6.46□□□□□ -1.37
COL6A5-204ENST00000512482 RFC5P40937 340 aa6.46□□□□□ -1.37
COL6A5-204ENST00000512482 CTDSPL2Q05D32 466 aa6.46□□□□□ -1.37
COL6A5-204ENST00000512482 AP1G2O75843 785 aa6.46□□□□□ -1.38
COL6A5-204ENST00000512482 IRF7Q92985 503 aa6.46□□□□□ -1.38
COL6A5-204ENST00000512482 PER1O15534 1290 aaPredicted RBP6.45□□□□□ -1.38
COL6A5-204ENST00000512482 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
COL6A5-204ENST00000512482 FAM174AQ8TBP5 190 aa6.45□□□□□ -1.38
COL6A5-204ENST00000512482 TLL2Q9Y6L7 1015 aa6.45□□□□□ -1.38
COL6A5-204ENST00000512482 FAM181BA6NEQ2 426 aa6.44□□□□□ -1.38
COL6A5-204ENST00000512482 NNTQ13423 1086 aa6.44□□□□□ -1.38
COL6A5-204ENST00000512482 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
COL6A5-204ENST00000512482 ZFP42Q96MM3 310 aa6.44□□□□□ -1.38
COL6A5-204ENST00000512482 F12P00748 615 aaPredicted RBP6.44□□□□□ -1.38
COL6A5-204ENST00000512482 H3BM21 787 aa6.43□□□□□ -1.38
COL6A5-204ENST00000512482 GMPRP36959 345 aa6.43□□□□□ -1.38
COL6A5-204ENST00000512482 SCARF1Q14162 830 aa6.43□□□□□ -1.38
COL6A5-204ENST00000512482 MRPL14Q6P1L8 145 aaKnown RBP6.43□□□□□ -1.38
COL6A5-204ENST00000512482 CDK15Q96Q40 435 aa6.43□□□□□ -1.38
COL6A5-204ENST00000512482 ADH1CP00326 375 aa6.42□□□□□ -1.38
COL6A5-204ENST00000512482 TIMP2P16035 220 aa6.42□□□□□ -1.38
COL6A5-204ENST00000512482 MAP10Q9P2G4 905 aa6.42□□□□□ -1.38
COL6A5-204ENST00000512482 WDR4P57081 412 aaKnown RBP6.41□□□□□ -1.38
COL6A5-204ENST00000512482 ARMC2Q8NEN0 867 aa6.41□□□□□ -1.38
COL6A5-204ENST00000512482 LRRN4Q8WUT4 740 aa6.41□□□□□ -1.38
COL6A5-204ENST00000512482 KLF16Q9BXK1 252 aaPredicted RBP6.41□□□□□ -1.38
COL6A5-204ENST00000512482 ZSCAN1Q8NBB4 408 aa6.41□□□□□ -1.38
COL6A5-204ENST00000512482 BANK1Q8NDB2 785 aa6.41□□□□□ -1.38
COL6A5-204ENST00000512482 USP17L8P0C7I0 530 aa6.4□□□□□ -1.38
COL6A5-204ENST00000512482 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
COL6A5-204ENST00000512482 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
COL6A5-204ENST00000512482 NR5A1Q13285 461 aa6.39□□□□□ -1.39
COL6A5-204ENST00000512482 NPM2Q86SE8 214 aaKnown RBP6.39□□□□□ -1.39
COL6A5-204ENST00000512482 VEGFBP49765 207 aa6.39□□□□□ -1.39
COL6A5-204ENST00000512482 NR6A1Q15406 480 aa6.39□□□□□ -1.39
COL6A5-204ENST00000512482 PURBQ96QR8 312 aaKnown RBP6.39□□□□□ -1.39
COL6A5-204ENST00000512482 BPHLQ86WA6 291 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms