RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
PTCD2-209ENST00000511752 AFF2P51816 1311 aa17.57■□□□□ 0.4
PTCD2-209ENST00000511752 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
PTCD2-209ENST00000511752 ABCA3Q99758 1704 aa17.57■□□□□ 0.4
PTCD2-209ENST00000511752 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
PTCD2-209ENST00000511752 PLEKHG5O94827 1062 aa17.55■□□□□ 0.4
PTCD2-209ENST00000511752 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
PTCD2-209ENST00000511752 CABLES1Q8TDN4 633 aa17.54■□□□□ 0.4
PTCD2-209ENST00000511752 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
PTCD2-209ENST00000511752 TESK2Q96S53 571 aa17.54■□□□□ 0.4
PTCD2-209ENST00000511752 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
PTCD2-209ENST00000511752 USP6P35125 1406 aa17.53■□□□□ 0.4
PTCD2-209ENST00000511752 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
PTCD2-209ENST00000511752 CRYBG1Q9Y4K1 1723 aa17.52■□□□□ 0.39
PTCD2-209ENST00000511752 TMF1P82094 1093 aa17.51■□□□□ 0.39
PTCD2-209ENST00000511752 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
PTCD2-209ENST00000511752 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
PTCD2-209ENST00000511752 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
PTCD2-209ENST00000511752 USP21Q9UK80 565 aa17.5■□□□□ 0.39
PTCD2-209ENST00000511752 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
PTCD2-209ENST00000511752 CPSF1Q10570 1443 aaKnown RBP17.48■□□□□ 0.39
PTCD2-209ENST00000511752 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
PTCD2-209ENST00000511752 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
PTCD2-209ENST00000511752 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
PTCD2-209ENST00000511752 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
PTCD2-209ENST00000511752 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
PTCD2-209ENST00000511752 RXRBP28702 533 aa17.46■□□□□ 0.39
PTCD2-209ENST00000511752 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTCD2-209ENST00000511752 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
PTCD2-209ENST00000511752 TERF2IPQ9NYB0 399 aa17.46■□□□□ 0.39
PTCD2-209ENST00000511752 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
PTCD2-209ENST00000511752 NWD2Q9ULI1 1742 aa17.46■□□□□ 0.39
PTCD2-209ENST00000511752 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
PTCD2-209ENST00000511752 TTC21AQ8NDW8 1320 aa17.46■□□□□ 0.38
PTCD2-209ENST00000511752 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
PTCD2-209ENST00000511752 SLIT2O94813 1529 aa17.45■□□□□ 0.38
PTCD2-209ENST00000511752 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
PTCD2-209ENST00000511752 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 SOCS7O14512 581 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 NLRP6P59044 892 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
PTCD2-209ENST00000511752 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 USP19O94966 1318 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
PTCD2-209ENST00000511752 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
PTCD2-209ENST00000511752 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
PTCD2-209ENST00000511752 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
PTCD2-209ENST00000511752 ATRNO75882 1429 aa17.43■□□□□ 0.38
PTCD2-209ENST00000511752 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
PTCD2-209ENST00000511752 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
PTCD2-209ENST00000511752 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
PTCD2-209ENST00000511752 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
PTCD2-209ENST00000511752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTCD2-209ENST00000511752 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
PTCD2-209ENST00000511752 SLIT3O75094 1523 aa17.39■□□□□ 0.37
PTCD2-209ENST00000511752 GCP02774 474 aa17.39■□□□□ 0.37
PTCD2-209ENST00000511752 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
PTCD2-209ENST00000511752 NRAPQ86VF7 1730 aa17.38■□□□□ 0.37
PTCD2-209ENST00000511752 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
PTCD2-209ENST00000511752 CPDO75976 1380 aa17.38■□□□□ 0.37
PTCD2-209ENST00000511752 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
PTCD2-209ENST00000511752 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
PTCD2-209ENST00000511752 MYOM1P52179 1685 aa17.36■□□□□ 0.37
PTCD2-209ENST00000511752 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
PTCD2-209ENST00000511752 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
PTCD2-209ENST00000511752 VPS72Q15906 364 aa17.36■□□□□ 0.37
PTCD2-209ENST00000511752 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
PTCD2-209ENST00000511752 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
PTCD2-209ENST00000511752 NME9Q86XW9 330 aa17.35■□□□□ 0.37
PTCD2-209ENST00000511752 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
PTCD2-209ENST00000511752 RGS12O14924 1447 aa17.35■□□□□ 0.37
PTCD2-209ENST00000511752 GLI3P10071 1580 aa17.33■□□□□ 0.37
PTCD2-209ENST00000511752 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
PTCD2-209ENST00000511752 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.36
PTCD2-209ENST00000511752 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
PTCD2-209ENST00000511752 SOX12O15370 315 aa17.31■□□□□ 0.36
PTCD2-209ENST00000511752 EVA1CP58658 441 aa17.31■□□□□ 0.36
PTCD2-209ENST00000511752 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
PTCD2-209ENST00000511752 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
PTCD2-209ENST00000511752 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
PTCD2-209ENST00000511752 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
PTCD2-209ENST00000511752 NFAT5O94916 1531 aa17.3■□□□□ 0.36
PTCD2-209ENST00000511752 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
PTCD2-209ENST00000511752 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
PTCD2-209ENST00000511752 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
PTCD2-209ENST00000511752 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
PTCD2-209ENST00000511752 COG3Q96JB2 828 aa17.28■□□□□ 0.36
PTCD2-209ENST00000511752 COL18A1P39060 1754 aa17.28■□□□□ 0.36
PTCD2-209ENST00000511752 SPATA31A5Q5VU36 1347 aa17.27■□□□□ 0.36
PTCD2-209ENST00000511752 SPATA31A7Q8IWB4 1347 aa17.27■□□□□ 0.36
PTCD2-209ENST00000511752 LTN1O94822 1766 aa17.27■□□□□ 0.35
PTCD2-209ENST00000511752 ABCC6O95255 1503 aa17.26■□□□□ 0.35
PTCD2-209ENST00000511752 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
PTCD2-209ENST00000511752 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms