RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
TOPBP1-208ENST00000511439 ZNF511Q8NB15 262 aa7.92□□□□□ -1.14
TOPBP1-208ENST00000511439 BAP1Q92560 729 aa7.92□□□□□ -1.14
TOPBP1-208ENST00000511439 TRIM47Q96LD4 638 aa7.92□□□□□ -1.14
TOPBP1-208ENST00000511439 LINC01559Q495D7 138 aa7.91□□□□□ -1.14
TOPBP1-208ENST00000511439 MPNDQ8N594 471 aa7.91□□□□□ -1.14
TOPBP1-208ENST00000511439 PCDHB15Q9Y5E8 787 aa7.91□□□□□ -1.14
TOPBP1-208ENST00000511439 CFAP99D6REC4 459 aa7.89□□□□□ -1.15
TOPBP1-208ENST00000511439 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
TOPBP1-208ENST00000511439 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 CAPN5O15484 640 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 NUTM2DQ5VT03 806 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 SLC24A3Q9HC58 644 aa7.88□□□□□ -1.15
TOPBP1-208ENST00000511439 WFS1O76024 890 aa7.87□□□□□ -1.15
TOPBP1-208ENST00000511439 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-208ENST00000511439 CSPP1Q1MSJ5 1256 aa7.87□□□□□ -1.15
TOPBP1-208ENST00000511439 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
TOPBP1-208ENST00000511439 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-208ENST00000511439 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
TOPBP1-208ENST00000511439 CABLES1Q8TDN4 633 aa7.86□□□□□ -1.15
TOPBP1-208ENST00000511439 LILRB3O75022 631 aa7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 SNRPBP14678 240 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 TSC1Q92574 1164 aa7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 MAP10Q9P2G4 905 aa7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 TLL2Q9Y6L7 1015 aa7.85□□□□□ -1.15
TOPBP1-208ENST00000511439 CLK2P49760 499 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-208ENST00000511439 NNTQ13423 1086 aa7.84□□□□□ -1.15
TOPBP1-208ENST00000511439 BPHLQ86WA6 291 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-208ENST00000511439 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-208ENST00000511439 AGERQ15109 404 aa7.83□□□□□ -1.16
TOPBP1-208ENST00000511439 NBPF14Q5TI25 921 aa7.83□□□□□ -1.16
TOPBP1-208ENST00000511439 TERTO14746 1132 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-208ENST00000511439 ADH1CP00326 375 aa7.82□□□□□ -1.16
TOPBP1-208ENST00000511439 QPCTQ16769 361 aa7.82□□□□□ -1.16
TOPBP1-208ENST00000511439 CDK15Q96Q40 435 aa7.82□□□□□ -1.16
TOPBP1-208ENST00000511439 PER1O15534 1290 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-208ENST00000511439 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
TOPBP1-208ENST00000511439 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
TOPBP1-208ENST00000511439 BMP1P13497 986 aa7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 NR5A1Q13285 461 aa7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 SCARF1Q14162 830 aa7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 NPAS3Q8IXF0 933 aa7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 GPKOWQ92917 476 aaPredicted RBP eCLIP7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 FOXJ1Q92949 421 aa7.8□□□□□ -1.16
TOPBP1-208ENST00000511439 WIPF1O43516 503 aa7.79□□□□□ -1.16
TOPBP1-208ENST00000511439 WDR4P57081 412 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-208ENST00000511439 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-208ENST00000511439 ARID5BQ14865 1188 aa7.79□□□□□ -1.16
TOPBP1-208ENST00000511439 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
TOPBP1-208ENST00000511439 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-208ENST00000511439 TIMP2P16035 220 aa7.77□□□□□ -1.17
TOPBP1-208ENST00000511439 RTL5Q5HYW3 569 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-208ENST00000511439 MRPL14Q6P1L8 145 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-208ENST00000511439 ZFP42Q96MM3 310 aa7.77□□□□□ -1.17
TOPBP1-208ENST00000511439 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
TOPBP1-208ENST00000511439 SKIV2LQ15477 1246 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-208ENST00000511439 SH3RF1Q7Z6J0 888 aa7.76□□□□□ -1.17
TOPBP1-208ENST00000511439 MAP4K5Q9Y4K4 846 aa7.76□□□□□ -1.17
TOPBP1-208ENST00000511439 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
TOPBP1-208ENST00000511439 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
TOPBP1-208ENST00000511439 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-208ENST00000511439 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
TOPBP1-208ENST00000511439 KLF16Q9BXK1 252 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-208ENST00000511439 UPP2O95045 317 aa7.74□□□□□ -1.17
TOPBP1-208ENST00000511439 ZIC2O95409 532 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-208ENST00000511439 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
TOPBP1-208ENST00000511439 STK17AQ9UEE5 414 aa7.74□□□□□ -1.17
TOPBP1-208ENST00000511439 GRM5P41594 1212 aa7.73□□□□□ -1.17
TOPBP1-208ENST00000511439 IRF7Q92985 503 aa7.73□□□□□ -1.17
TOPBP1-208ENST00000511439 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
TOPBP1-208ENST00000511439 ATP1B4Q9UN42 357 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-208ENST00000511439 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-208ENST00000511439 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 BRPF1P55201 1214 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 CTDSPL2Q05D32 466 aa7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 VASH1Q7L8A9 365 aaPredicted RBP7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 PURBQ96QR8 312 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 CDV3Q9UKY7 258 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-208ENST00000511439 NR3C2P08235 984 aa7.71□□□□□ -1.18
TOPBP1-208ENST00000511439 FSHRP23945 695 aa7.71□□□□□ -1.18
TOPBP1-208ENST00000511439 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
TOPBP1-208ENST00000511439 PNMA1Q8ND90 353 aa7.71□□□□□ -1.18
TOPBP1-208ENST00000511439 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
TOPBP1-208ENST00000511439 H3BM21 787 aa7.7□□□□□ -1.18
TOPBP1-208ENST00000511439 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.7□□□□□ -1.18
TOPBP1-208ENST00000511439 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
TOPBP1-208ENST00000511439 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
TOPBP1-208ENST00000511439 CCDC116Q8IYX3 515 aa7.69□□□□□ -1.18
TOPBP1-208ENST00000511439 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
TOPBP1-208ENST00000511439 ARHGAP9Q9BRR9 750 aa7.69□□□□□ -1.18
TOPBP1-208ENST00000511439 CARD14Q9BXL6 1004 aa7.69□□□□□ -1.18
TOPBP1-208ENST00000511439 GPBP1L1Q9HC44 474 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-208ENST00000511439 CCDC180Q9P1Z9 1646 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms