RNA–Protein interactions for RNA: ENST00000511262.5

NEK11-213, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK11, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-213ENST00000511262 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
NEK11-213ENST00000511262 TESK2Q96S53 571 aa17.49■□□□□ 0.39
NEK11-213ENST00000511262 USP21Q9UK80 565 aa17.49■□□□□ 0.39
NEK11-213ENST00000511262 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
NEK11-213ENST00000511262 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
NEK11-213ENST00000511262 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
NEK11-213ENST00000511262 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
NEK11-213ENST00000511262 USP6P35125 1406 aa17.46■□□□□ 0.39
NEK11-213ENST00000511262 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
NEK11-213ENST00000511262 CRYBG1Q9Y4K1 1723 aa17.45■□□□□ 0.38
NEK11-213ENST00000511262 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
NEK11-213ENST00000511262 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
NEK11-213ENST00000511262 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
NEK11-213ENST00000511262 SOCS7O14512 581 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 RXRBP28702 533 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 PLCH1Q4KWH8 1693 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 SOX12O15370 315 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
NEK11-213ENST00000511262 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
NEK11-213ENST00000511262 EP400Q96L91 3159 aa17.42■□□□□ 0.38
NEK11-213ENST00000511262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
NEK11-213ENST00000511262 KTN1Q86UP2 1357 aaKnown RBP17.42■□□□□ 0.38
NEK11-213ENST00000511262 PIK3C2AO00443 1686 aa17.41■□□□□ 0.38
NEK11-213ENST00000511262 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
NEK11-213ENST00000511262 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
NEK11-213ENST00000511262 NLRP6P59044 892 aa17.4■□□□□ 0.38
NEK11-213ENST00000511262 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
NEK11-213ENST00000511262 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
NEK11-213ENST00000511262 CCDC9Q9Y3X0 531 aaKnown RBP17.4■□□□□ 0.38
NEK11-213ENST00000511262 SLIT2O94813 1529 aa17.39■□□□□ 0.38
NEK11-213ENST00000511262 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.38
NEK11-213ENST00000511262 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
NEK11-213ENST00000511262 TMF1P82094 1093 aa17.39■□□□□ 0.37
NEK11-213ENST00000511262 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
NEK11-213ENST00000511262 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
NEK11-213ENST00000511262 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
NEK11-213ENST00000511262 A0A1W2PP64 1363 aa17.38■□□□□ 0.37
NEK11-213ENST00000511262 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
NEK11-213ENST00000511262 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
NEK11-213ENST00000511262 RGS12O14924 1447 aa17.38■□□□□ 0.37
NEK11-213ENST00000511262 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
NEK11-213ENST00000511262 ATRNO75882 1429 aa17.37■□□□□ 0.37
NEK11-213ENST00000511262 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
NEK11-213ENST00000511262 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
NEK11-213ENST00000511262 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
NEK11-213ENST00000511262 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
NEK11-213ENST00000511262 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
NEK11-213ENST00000511262 NME9Q86XW9 330 aa17.36■□□□□ 0.37
NEK11-213ENST00000511262 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
NEK11-213ENST00000511262 USP19O94966 1318 aa17.35■□□□□ 0.37
NEK11-213ENST00000511262 GCP02774 474 aa17.35■□□□□ 0.37
NEK11-213ENST00000511262 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
NEK11-213ENST00000511262 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
NEK11-213ENST00000511262 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
NEK11-213ENST00000511262 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
NEK11-213ENST00000511262 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
NEK11-213ENST00000511262 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.37
NEK11-213ENST00000511262 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.36
NEK11-213ENST00000511262 GLI3P10071 1580 aa17.33■□□□□ 0.36
NEK11-213ENST00000511262 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
NEK11-213ENST00000511262 MYOM1P52179 1685 aa17.31■□□□□ 0.36
NEK11-213ENST00000511262 A0A0G2JS52 829 aa17.31■□□□□ 0.36
NEK11-213ENST00000511262 MYT1Q01538 1121 aa17.31■□□□□ 0.36
NEK11-213ENST00000511262 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
NEK11-213ENST00000511262 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
NEK11-213ENST00000511262 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
NEK11-213ENST00000511262 SLIT3O75094 1523 aa17.3■□□□□ 0.36
NEK11-213ENST00000511262 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
NEK11-213ENST00000511262 VPS72Q15906 364 aa17.28■□□□□ 0.36
NEK11-213ENST00000511262 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
NEK11-213ENST00000511262 CAMTA1Q9Y6Y1 1673 aa17.28■□□□□ 0.36
NEK11-213ENST00000511262 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
NEK11-213ENST00000511262 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
NEK11-213ENST00000511262 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
NEK11-213ENST00000511262 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.36
NEK11-213ENST00000511262 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
NEK11-213ENST00000511262 CDCA8Q53HL2 280 aa17.27■□□□□ 0.35
NEK11-213ENST00000511262 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
NEK11-213ENST00000511262 FBLN1P23142 703 aa17.26■□□□□ 0.35
NEK11-213ENST00000511262 EVA1CP58658 441 aa17.26■□□□□ 0.35
NEK11-213ENST00000511262 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
NEK11-213ENST00000511262 CPDO75976 1380 aa17.26■□□□□ 0.35
NEK11-213ENST00000511262 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
NEK11-213ENST00000511262 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
NEK11-213ENST00000511262 NFAT5O94916 1531 aa17.25■□□□□ 0.35
NEK11-213ENST00000511262 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
NEK11-213ENST00000511262 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
NEK11-213ENST00000511262 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
NEK11-213ENST00000511262 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
NEK11-213ENST00000511262 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
NEK11-213ENST00000511262 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
NEK11-213ENST00000511262 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
NEK11-213ENST00000511262 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
NEK11-213ENST00000511262 SPATA31A5Q5VU36 1347 aa17.22■□□□□ 0.35
NEK11-213ENST00000511262 SPATA31A7Q8IWB4 1347 aa17.22■□□□□ 0.35
NEK11-213ENST00000511262 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms