RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 ALDH1A1P00352 501 aa8.41□□□□□ -1.06
MATR3-216ENST00000511249 NLRP7Q8WX94 980 aa8.41□□□□□ -1.06
MATR3-216ENST00000511249 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
MATR3-216ENST00000511249 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
MATR3-216ENST00000511249 BMP1P13497 986 aa8.38□□□□□ -1.07
MATR3-216ENST00000511249 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
MATR3-216ENST00000511249 ERBB4Q15303 1308 aa8.37□□□□□ -1.07
MATR3-216ENST00000511249 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
MATR3-216ENST00000511249 SUZ12Q15022 739 aaKnown RBP8.37□□□□□ -1.07
MATR3-216ENST00000511249 VEGFBP49765 207 aa8.36□□□□□ -1.07
MATR3-216ENST00000511249 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
MATR3-216ENST00000511249 MCM6Q14566 821 aa8.36□□□□□ -1.07
MATR3-216ENST00000511249 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
MATR3-216ENST00000511249 SIAH2O43255 324 aa8.35□□□□□ -1.07
MATR3-216ENST00000511249 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
MATR3-216ENST00000511249 CD46P15529 392 aa8.34□□□□□ -1.07
MATR3-216ENST00000511249 KDM4AO75164 1064 aa8.33□□□□□ -1.08
MATR3-216ENST00000511249 MS4A1P11836 297 aa8.33□□□□□ -1.08
MATR3-216ENST00000511249 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
MATR3-216ENST00000511249 USP46P62068 366 aa8.32□□□□□ -1.08
MATR3-216ENST00000511249 EHBP1Q8NDI1 1231 aa8.32□□□□□ -1.08
MATR3-216ENST00000511249 JUNDP17535 347 aa8.31□□□□□ -1.08
MATR3-216ENST00000511249 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
MATR3-216ENST00000511249 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
MATR3-216ENST00000511249 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
MATR3-216ENST00000511249 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
MATR3-216ENST00000511249 VSIG8P0DPA2 414 aa8.3□□□□□ -1.08
MATR3-216ENST00000511249 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
MATR3-216ENST00000511249 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
MATR3-216ENST00000511249 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
MATR3-216ENST00000511249 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
MATR3-216ENST00000511249 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
MATR3-216ENST00000511249 HLA-CQ95604 372 aa8.27□□□□□ -1.09
MATR3-216ENST00000511249 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
MATR3-216ENST00000511249 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
MATR3-216ENST00000511249 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
MATR3-216ENST00000511249 HOXA2O43364 376 aa8.26□□□□□ -1.09
MATR3-216ENST00000511249 CCDC97Q96F63 343 aaPredicted RBP8.26□□□□□ -1.09
MATR3-216ENST00000511249 SH3BP2P78314 561 aa8.25□□□□□ -1.09
MATR3-216ENST00000511249 SCARF1Q14162 830 aa8.25□□□□□ -1.09
MATR3-216ENST00000511249 MRPL14Q6P1L8 145 aaKnown RBP8.25□□□□□ -1.09
MATR3-216ENST00000511249 GSK3AP49840 483 aa8.24□□□□□ -1.09
MATR3-216ENST00000511249 RAD21O60216 631 aa8.23□□□□□ -1.09
MATR3-216ENST00000511249 SKIV2LQ15477 1246 aaKnown RBP8.23□□□□□ -1.09
MATR3-216ENST00000511249 RETREG3Q86VR2 466 aa8.23□□□□□ -1.09
MATR3-216ENST00000511249 MPNDQ8N594 471 aa8.23□□□□□ -1.09
MATR3-216ENST00000511249 AEBP1Q8IUX7 1158 aa8.22□□□□□ -1.09
MATR3-216ENST00000511249 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
MATR3-216ENST00000511249 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
MATR3-216ENST00000511249 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
MATR3-216ENST00000511249 CLCN1P35523 988 aa8.2□□□□□ -1.1
MATR3-216ENST00000511249 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
MATR3-216ENST00000511249 NNTQ13423 1086 aa8.2□□□□□ -1.1
MATR3-216ENST00000511249 PURBQ96QR8 312 aaKnown RBP8.2□□□□□ -1.1
MATR3-216ENST00000511249 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
MATR3-216ENST00000511249 CCNYL3P0C7X3 344 aa8.19□□□□□ -1.1
MATR3-216ENST00000511249 TIMP2P16035 220 aa8.19□□□□□ -1.1
MATR3-216ENST00000511249 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
MATR3-216ENST00000511249 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
MATR3-216ENST00000511249 COG6Q9Y2V7 657 aa8.19□□□□□ -1.1
MATR3-216ENST00000511249 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
MATR3-216ENST00000511249 ADH1CP00326 375 aa8.18□□□□□ -1.1
MATR3-216ENST00000511249 MDM2Q00987 491 aaPredicted RBP8.18□□□□□ -1.1
MATR3-216ENST00000511249 GPCPD1Q9NPB8 672 aa8.18□□□□□ -1.1
MATR3-216ENST00000511249 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
MATR3-216ENST00000511249 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
MATR3-216ENST00000511249 GDF11O95390 407 aa8.17□□□□□ -1.1
MATR3-216ENST00000511249 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
MATR3-216ENST00000511249 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
MATR3-216ENST00000511249 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
MATR3-216ENST00000511249 UNC93B1Q9H1C4 597 aa8.17□□□□□ -1.1
MATR3-216ENST00000511249 RASSF7Q02833 373 aa8.16□□□□□ -1.1
MATR3-216ENST00000511249 PTPRNQ16849 979 aa8.16□□□□□ -1.1
MATR3-216ENST00000511249 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
MATR3-216ENST00000511249 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
MATR3-216ENST00000511249 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
MATR3-216ENST00000511249 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
MATR3-216ENST00000511249 IRF5Q13568 498 aa8.15□□□□□ -1.1
MATR3-216ENST00000511249 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
MATR3-216ENST00000511249 TMCO4Q5TGY1 634 aa8.15□□□□□ -1.1
MATR3-216ENST00000511249 ZNF511Q8NB15 262 aa8.15□□□□□ -1.1
MATR3-216ENST00000511249 BAP1Q92560 729 aa8.15□□□□□ -1.1
MATR3-216ENST00000511249 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
MATR3-216ENST00000511249 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
MATR3-216ENST00000511249 MAN1A2O60476 641 aa8.14□□□□□ -1.11
MATR3-216ENST00000511249 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
MATR3-216ENST00000511249 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
MATR3-216ENST00000511249 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
MATR3-216ENST00000511249 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
MATR3-216ENST00000511249 GZF1Q9H116 711 aaPredicted RBP8.13□□□□□ -1.11
MATR3-216ENST00000511249 SNRKQ9NRH2 765 aa8.13□□□□□ -1.11
MATR3-216ENST00000511249 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
MATR3-216ENST00000511249 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
MATR3-216ENST00000511249 FDX1P10109 184 aa8.12□□□□□ -1.11
MATR3-216ENST00000511249 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
MATR3-216ENST00000511249 MFAP1P55081 439 aaKnown RBP8.11□□□□□ -1.11
MATR3-216ENST00000511249 MYSM1Q5VVJ2 828 aa8.11□□□□□ -1.11
MATR3-216ENST00000511249 BANK1Q8NDB2 785 aa8.11□□□□□ -1.11
MATR3-216ENST00000511249 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
MATR3-216ENST00000511249 PCDHGC3Q9UN70 934 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms