RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 C11orf95C9JLR9 678 aaPredicted RBP7.58□□□□□ -1.2
PROM1-211ENST00000511153 PMFBP1Q8TBY8 1022 aa7.58□□□□□ -1.2
PROM1-211ENST00000511153 CDK19Q9BWU1 502 aa7.58□□□□□ -1.2
PROM1-211ENST00000511153 PTCH1Q13635 1447 aa7.58□□□□□ -1.2
PROM1-211ENST00000511153 MSH6P52701 1360 aa7.57□□□□□ -1.2
PROM1-211ENST00000511153 TECPR2O15040 1411 aa7.57□□□□□ -1.2
PROM1-211ENST00000511153 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
PROM1-211ENST00000511153 ORAI2Q96SN7 254 aa7.57□□□□□ -1.2
PROM1-211ENST00000511153 EIF3AQ14152 1382 aaKnown RBP7.57□□□□□ -1.2
PROM1-211ENST00000511153 ADGRL3Q9HAR2 1447 aa7.56□□□□□ -1.2
PROM1-211ENST00000511153 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
PROM1-211ENST00000511153 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
PROM1-211ENST00000511153 ZRANB1Q9UGI0 708 aa7.56□□□□□ -1.2
PROM1-211ENST00000511153 DLC1Q96QB1 1528 aa7.56□□□□□ -1.2
PROM1-211ENST00000511153 PRR36Q9H6K5 1346 aa7.56□□□□□ -1.2
PROM1-211ENST00000511153 FAM135BQ49AJ0 1406 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 TULP4Q9NRJ4 1543 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 WASLO00401 505 aaPredicted RBP7.55□□□□□ -1.2
PROM1-211ENST00000511153 RIOK3O14730 519 aaKnown RBP7.55□□□□□ -1.2
PROM1-211ENST00000511153 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
PROM1-211ENST00000511153 TESK2Q96S53 571 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 C19orf44Q9H6X5 657 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 PCDHB8Q9UN66 801 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 PCDHB13Q9Y5F0 798 aa7.55□□□□□ -1.2
PROM1-211ENST00000511153 EVX2Q03828 476 aa7.54□□□□□ -1.2
PROM1-211ENST00000511153 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
PROM1-211ENST00000511153 PHF12Q96QT6 1004 aa7.54□□□□□ -1.2
PROM1-211ENST00000511153 EVC2Q86UK5 1308 aa7.54□□□□□ -1.2
PROM1-211ENST00000511153 TMF1P82094 1093 aa7.54□□□□□ -1.2
PROM1-211ENST00000511153 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
PROM1-211ENST00000511153 FMN2Q9NZ56 1722 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 USP32Q8NFA0 1604 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 FOXO3O43524 673 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 TOM1O60784 492 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 SIRT1Q96EB6 747 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 CABP1Q9NZU7 370 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 MST1RQ04912 1400 aa7.53□□□□□ -1.2
PROM1-211ENST00000511153 C1orf167Q5SNV9 1468 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 C19orf67A6NJJ6 358 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 MAP3K13O43283 966 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 NUTM2GQ5VZR2 741 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 LMOD2Q6P5Q4 547 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 BRINP3Q76B58 766 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 CDC42BPGQ6DT37 1551 aa7.52□□□□□ -1.21
PROM1-211ENST00000511153 PAK3O75914 559 aaPredicted RBP7.51□□□□□ -1.21
PROM1-211ENST00000511153 NGDNQ8NEJ9 315 aaKnown RBP7.51□□□□□ -1.21
PROM1-211ENST00000511153 KIF12Q96FN5 646 aa7.51□□□□□ -1.21
PROM1-211ENST00000511153 PHF8Q9UPP1 1060 aa7.51□□□□□ -1.21
PROM1-211ENST00000511153 ROBO1Q9Y6N7 1651 aa7.51□□□□□ -1.21
PROM1-211ENST00000511153 PPIP5K1Q6PFW1 1433 aa7.51□□□□□ -1.21
PROM1-211ENST00000511153 WASHC2AQ641Q2 1341 aa7.51□□□□□ -1.21
PROM1-211ENST00000511153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.5□□□□□ -1.21
PROM1-211ENST00000511153 ZFP91Q96JP5 570 aaPredicted RBP7.5□□□□□ -1.21
PROM1-211ENST00000511153 ADGRB2O60241 1585 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 ACEP12821 1306 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 ATP7BP35670 1465 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 SOX12O15370 315 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 PSME1Q06323 249 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 IFNL1Q8IU54 200 aa7.5□□□□□ -1.21
PROM1-211ENST00000511153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.5□□□□□ -1.21
PROM1-211ENST00000511153 HSPA1LP34931 641 aa7.49□□□□□ -1.21
PROM1-211ENST00000511153 DDX10Q13206 875 aaKnown RBP7.49□□□□□ -1.21
PROM1-211ENST00000511153 CCDC7Q96M83 1385 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 NCOA3Q9Y6Q9 1424 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
PROM1-211ENST00000511153 HAX1O00165 279 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 STK25O00506 426 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 KRT28Q7Z3Y7 464 aa7.48□□□□□ -1.21
PROM1-211ENST00000511153 BBXQ8WY36 941 aaPredicted RBP7.48□□□□□ -1.21
PROM1-211ENST00000511153 PHLPP1O60346 1717 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 ITSN1Q15811 1721 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 NUTM2BA6NNL0 878 aaPredicted RBP7.47□□□□□ -1.21
PROM1-211ENST00000511153 NUTM2EB1AL46 878 aaPredicted RBP7.47□□□□□ -1.21
PROM1-211ENST00000511153 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
PROM1-211ENST00000511153 HS6ST3Q8IZP7 471 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 CABLES1Q8TDN4 633 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 PANK3Q9H999 370 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 MYOM1P52179 1685 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 TOPAZ1Q8N9V7 1692 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 DCCP43146 1447 aa7.47□□□□□ -1.21
PROM1-211ENST00000511153 NKX1-1Q15270 411 aaPredicted RBP7.46□□□□□ -1.21
PROM1-211ENST00000511153 PAXIP1Q6ZW49 1069 aaPredicted RBP7.46□□□□□ -1.21
PROM1-211ENST00000511153 NME9Q86XW9 330 aa7.46□□□□□ -1.21
PROM1-211ENST00000511153 BCL11BQ9C0K0 894 aaPredicted RBP7.46□□□□□ -1.21
PROM1-211ENST00000511153 TRPC6Q9Y210 931 aa7.46□□□□□ -1.21
PROM1-211ENST00000511153 A0A1W2PP64 1363 aa7.46□□□□□ -1.21
PROM1-211ENST00000511153 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.21
PROM1-211ENST00000511153 KTN1Q86UP2 1357 aaKnown RBP7.46□□□□□ -1.21
PROM1-211ENST00000511153 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.21
PROM1-211ENST00000511153 ANKARQ7Z5J8 1434 aa7.46□□□□□ -1.22
PROM1-211ENST00000511153 FBLN1P23142 703 aa7.46□□□□□ -1.22
PROM1-211ENST00000511153 TNNT2P45379 298 aaPredicted RBP7.46□□□□□ -1.22
PROM1-211ENST00000511153 HDGFL2Q7Z4V5 671 aaPredicted RBP7.46□□□□□ -1.22
PROM1-211ENST00000511153 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
PROM1-211ENST00000511153 CARD14Q9BXL6 1004 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms