RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 CCDC9Q9Y3X0 531 aaKnown RBP33.51■■■□□ 2.95
SMAD5-207ENST00000511116 ITSN1Q15811 1721 aa33.5■■■□□ 2.95
SMAD5-207ENST00000511116 DEFB132Q7Z7B7 95 aa33.49■■■□□ 2.95
SMAD5-207ENST00000511116 BTG4Q9NY30 223 aa33.49■■■□□ 2.95
SMAD5-207ENST00000511116 NGDNQ8NEJ9 315 aaKnown RBP33.45■■■□□ 2.95
SMAD5-207ENST00000511116 SF3B2Q13435 895 aaKnown RBP33.43■■■□□ 2.94
SMAD5-207ENST00000511116 KIAA1210Q9ULL0 1709 aa33.42■■■□□ 2.94
SMAD5-207ENST00000511116 FAM98CQ17RN3 349 aaKnown RBP33.42■■■□□ 2.94
SMAD5-207ENST00000511116 NUDT16Q96DE0 195 aaKnown RBP33.42■■■□□ 2.94
SMAD5-207ENST00000511116 SPATA31A5Q5VU36 1347 aa33.42■■■□□ 2.94
SMAD5-207ENST00000511116 SPATA31A7Q8IWB4 1347 aa33.42■■■□□ 2.94
SMAD5-207ENST00000511116 TOPAZ1Q8N9V7 1692 aa33.41■■■□□ 2.94
SMAD5-207ENST00000511116 THSD7AQ9UPZ6 1657 aa33.41■■■□□ 2.94
SMAD5-207ENST00000511116 POLR3AO14802 1390 aaPredicted RBP33.39■■■□□ 2.94
SMAD5-207ENST00000511116 PHRF1Q9P1Y6 1649 aaKnown RBP33.37■■■□□ 2.93
SMAD5-207ENST00000511116 PAK3O75914 559 aaPredicted RBP33.36■■■□□ 2.93
SMAD5-207ENST00000511116 PRDM11Q9NQV5 511 aa33.35■■■□□ 2.93
SMAD5-207ENST00000511116 CDK19Q9BWU1 502 aa33.34■■■□□ 2.93
SMAD5-207ENST00000511116 KIAA0232Q92628 1395 aa33.33■■■□□ 2.93
SMAD5-207ENST00000511116 A0A0G2JS52 829 aa33.32■■■□□ 2.92
SMAD5-207ENST00000511116 MYT1Q01538 1121 aa33.32■■■□□ 2.92
SMAD5-207ENST00000511116 LRP5O75197 1615 aa33.31■■■□□ 2.92
SMAD5-207ENST00000511116 RGPD1P0DJD0 1748 aa33.31■■■□□ 2.92
SMAD5-207ENST00000511116 PLEKHG3A1L390 1219 aa33.31■■■□□ 2.92
SMAD5-207ENST00000511116 BAG6P46379 1132 aa33.31■■■□□ 2.92
SMAD5-207ENST00000511116 CCDC61Q9Y6R9 512 aa33.31■■■□□ 2.92
SMAD5-207ENST00000511116 SPATA31A1Q5TZJ5 1347 aa33.29■■■□□ 2.92
SMAD5-207ENST00000511116 DISP2A7MBM2 1401 aa33.29■■■□□ 2.92
SMAD5-207ENST00000511116 ACEP12821 1306 aa33.28■■■□□ 2.92
SMAD5-207ENST00000511116 NBPF8Q3BBV2 869 aa33.27■■■□□ 2.92
SMAD5-207ENST00000511116 TNS1Q9HBL0 1735 aaKnown RBP33.25■■■□□ 2.91
SMAD5-207ENST00000511116 NRKQ7Z2Y5 1582 aa33.25■■■□□ 2.91
SMAD5-207ENST00000511116 CHRNA2Q15822 529 aa33.23■■■□□ 2.91
SMAD5-207ENST00000511116 NBPF1Q3BBV0 1214 aa33.23■■■□□ 2.91
SMAD5-207ENST00000511116 FAM182BQ5T319 152 aa33.22■■■□□ 2.91
SMAD5-207ENST00000511116 USP19O94966 1318 aa33.22■■■□□ 2.91
SMAD5-207ENST00000511116 CPDO75976 1380 aa33.21■■■□□ 2.91
SMAD5-207ENST00000511116 LMO7Q8WWI1 1683 aa33.2■■■□□ 2.91
SMAD5-207ENST00000511116 ZC3H6P61129 1189 aaKnown RBP33.19■■■□□ 2.9
SMAD5-207ENST00000511116 SSH2Q76I76 1423 aa33.19■■■□□ 2.9
SMAD5-207ENST00000511116 EN1Q05925 392 aaPredicted RBP33.18■■■□□ 2.9
SMAD5-207ENST00000511116 NUTM2GQ5VZR2 741 aa33.18■■■□□ 2.9
SMAD5-207ENST00000511116 CAMTA1Q9Y6Y1 1673 aa33.17■■■□□ 2.9
SMAD5-207ENST00000511116 BARGINQ6ZT62 677 aa33.16■■■□□ 2.9
SMAD5-207ENST00000511116 BRD4O60885 1362 aaPredicted RBP33.15■■■□□ 2.9
SMAD5-207ENST00000511116 STRN4Q9NRL3 753 aa33.15■■■□□ 2.9
SMAD5-207ENST00000511116 PPIP5K1Q6PFW1 1433 aa33.14■■■□□ 2.9
SMAD5-207ENST00000511116 CENPJQ9HC77 1338 aaPredicted RBP33.14■■■□□ 2.9
SMAD5-207ENST00000511116 ABTB2Q8N961 1025 aa33.14■■■□□ 2.9
SMAD5-207ENST00000511116 PSDA5PKW4 1024 aaPredicted RBP33.13■■■□□ 2.89
SMAD5-207ENST00000511116 FAM196AQ6ZSG2 479 aa33.13■■■□□ 2.89
SMAD5-207ENST00000511116 QRICH2Q9H0J4 1663 aa33.1■■■□□ 2.89
SMAD5-207ENST00000511116 SRPK2P78362 688 aaKnown RBP33.08■■■□□ 2.89
SMAD5-207ENST00000511116 NLRP13Q86W25 1043 aa33.08■■■□□ 2.89
SMAD5-207ENST00000511116 CAMKK2Q96RR4 588 aa33.08■■■□□ 2.89
SMAD5-207ENST00000511116 GCP02774 474 aa33.07■■■□□ 2.88
SMAD5-207ENST00000511116 LARP1Q6PKG0 1096 aaKnown RBP33.07■■■□□ 2.88
SMAD5-207ENST00000511116 PARD3Q8TEW0 1356 aa33.07■■■□□ 2.88
SMAD5-207ENST00000511116 EVA1CP58658 441 aa33.06■■■□□ 2.88
SMAD5-207ENST00000511116 CABP2Q9NPB3 220 aa33.06■■■□□ 2.88
SMAD5-207ENST00000511116 USP6P35125 1406 aa33.05■■■□□ 2.88
SMAD5-207ENST00000511116 TRIM37O94972 964 aa33.05■■■□□ 2.88
SMAD5-207ENST00000511116 EZH2Q15910 746 aaKnown RBP33.05■■■□□ 2.88
SMAD5-207ENST00000511116 TCP11L2Q8N4U5 519 aa33.05■■■□□ 2.88
SMAD5-207ENST00000511116 COL5A2P05997 1499 aaPredicted RBP33.05■■■□□ 2.88
SMAD5-207ENST00000511116 USP35Q9P2H5 1018 aa33.04■■■□□ 2.88
SMAD5-207ENST00000511116 THRAP3Q9Y2W1 955 aaKnown RBP33.04■■■□□ 2.88
SMAD5-207ENST00000511116 SLIT3O75094 1523 aa33.02■■■□□ 2.88
SMAD5-207ENST00000511116 PARP4Q9UKK3 1724 aaKnown RBP33.02■■■□□ 2.88
SMAD5-207ENST00000511116 RREB1Q92766 1687 aa33.01■■■□□ 2.88
SMAD5-207ENST00000511116 R3HDM1Q15032 1099 aaKnown RBP33.01■■■□□ 2.87
SMAD5-207ENST00000511116 PDE3BQ13370 1112 aa32.99■■■□□ 2.87
SMAD5-207ENST00000511116 L3MBTL2Q969R5 705 aa32.99■■■□□ 2.87
SMAD5-207ENST00000511116 CABP1Q9NZU7 370 aa32.99■■■□□ 2.87
SMAD5-207ENST00000511116 TRPM1Q7Z4N2 1603 aa32.98■■■□□ 2.87
SMAD5-207ENST00000511116 AATKQ6ZMQ8 1374 aa32.97■■■□□ 2.87
SMAD5-207ENST00000511116 CRB1P82279 1406 aa32.96■■■□□ 2.87
SMAD5-207ENST00000511116 APBA3O96018 575 aa32.96■■■□□ 2.87
SMAD5-207ENST00000511116 PIK3C2AO00443 1686 aa32.95■■■□□ 2.87
SMAD5-207ENST00000511116 COL18A1P39060 1754 aa32.94■■■□□ 2.86
SMAD5-207ENST00000511116 NUP188Q5SRE5 1749 aa32.94■■■□□ 2.86
SMAD5-207ENST00000511116 PEAK1Q9H792 1746 aa32.92■■■□□ 2.86
SMAD5-207ENST00000511116 NLRP6P59044 892 aa32.92■■■□□ 2.86
SMAD5-207ENST00000511116 EVC2Q86UK5 1308 aa32.91■■■□□ 2.86
SMAD5-207ENST00000511116 C11orf95C9JLR9 678 aaPredicted RBP32.9■■■□□ 2.86
SMAD5-207ENST00000511116 LRRC37A3O60309 1634 aa32.87■■■□□ 2.85
SMAD5-207ENST00000511116 AKAP12Q02952 1782 aa32.86■■■□□ 2.85
SMAD5-207ENST00000511116 OVOS2A0A0G2JMS6 1433 aa32.85■■■□□ 2.85
SMAD5-207ENST00000511116 OVOS2A0A0J9YW53 1432 aa32.85■■■□□ 2.85
SMAD5-207ENST00000511116 OVOS2Q6IE36 1432 aa32.85■■■□□ 2.85
SMAD5-207ENST00000511116 ZNF692Q9BU19 519 aaPredicted RBP32.84■■■□□ 2.85
SMAD5-207ENST00000511116 CPSF1Q10570 1443 aaKnown RBP32.84■■■□□ 2.85
SMAD5-207ENST00000511116 RGPD3A6NKT7 1758 aaPredicted RBP32.83■■■□□ 2.85
SMAD5-207ENST00000511116 RGPD4Q7Z3J3 1758 aa32.83■■■□□ 2.85
SMAD5-207ENST00000511116 SIN3AQ96ST3 1273 aa32.83■■■□□ 2.85
SMAD5-207ENST00000511116 WNK3Q9BYP7 1800 aa32.83■■■□□ 2.85
SMAD5-207ENST00000511116 TTC21BQ7Z4L5 1316 aa32.82■■■□□ 2.84
SMAD5-207ENST00000511116 SBF2Q86WG5 1849 aa32.82■■■□□ 2.84
SMAD5-207ENST00000511116 ROCK2O75116 1388 aaKnown RBP32.82■■■□□ 2.84
SMAD5-207ENST00000511116 WDR17Q8IZU2 1322 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms