RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 SYT17Q9BSW7 474 aa10.62□□□□□ -0.71
CLCN3-207ENST00000511092 FHDC1Q9C0D6 1143 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-207ENST00000511092 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
CLCN3-207ENST00000511092 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
CLCN3-207ENST00000511092 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
CLCN3-207ENST00000511092 MYOM2P54296 1465 aa10.61□□□□□ -0.71
CLCN3-207ENST00000511092 MST1RQ04912 1400 aa10.6□□□□□ -0.71
CLCN3-207ENST00000511092 ATF3P18847 181 aa10.6□□□□□ -0.71
CLCN3-207ENST00000511092 APLP1P51693 650 aa10.6□□□□□ -0.71
CLCN3-207ENST00000511092 HTRA3P83110 453 aa10.6□□□□□ -0.71
CLCN3-207ENST00000511092 CEP152O94986 1710 aa10.6□□□□□ -0.71
CLCN3-207ENST00000511092 LAMC1P11047 1609 aa10.59□□□□□ -0.71
CLCN3-207ENST00000511092 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
CLCN3-207ENST00000511092 JMYQ8N9B5 988 aa10.59□□□□□ -0.71
CLCN3-207ENST00000511092 PDGFDQ9GZP0 370 aaPredicted RBP10.59□□□□□ -0.71
CLCN3-207ENST00000511092 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
CLCN3-207ENST00000511092 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 PLCH1Q4KWH8 1693 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
CLCN3-207ENST00000511092 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 TMEM131LA2VDJ0 1609 aa10.58□□□□□ -0.72
CLCN3-207ENST00000511092 STK25O00506 426 aa10.57□□□□□ -0.72
CLCN3-207ENST00000511092 PTGER2P43116 358 aa10.57□□□□□ -0.72
CLCN3-207ENST00000511092 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
CLCN3-207ENST00000511092 SLIT2O94813 1529 aa10.57□□□□□ -0.72
CLCN3-207ENST00000511092 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
CLCN3-207ENST00000511092 PDE4DIPQ5VU43 2346 aa10.56□□□□□ -0.72
CLCN3-207ENST00000511092 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-207ENST00000511092 TROQ12816 1431 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-207ENST00000511092 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
CLCN3-207ENST00000511092 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLCN3-207ENST00000511092 CROCC2H7BZ55 1655 aa10.54□□□□□ -0.72
CLCN3-207ENST00000511092 ZBTB7AO95365 584 aa10.54□□□□□ -0.72
CLCN3-207ENST00000511092 KLRG1Q96E93 195 aa10.54□□□□□ -0.72
CLCN3-207ENST00000511092 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
CLCN3-207ENST00000511092 GPBP1L1Q9HC44 474 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-207ENST00000511092 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 SOX12O15370 315 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 GPR162Q16538 588 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 UNC5CLQ8IV45 518 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
CLCN3-207ENST00000511092 KIF3BO15066 747 aa10.52□□□□□ -0.73
CLCN3-207ENST00000511092 SNPHO15079 494 aa10.52□□□□□ -0.73
CLCN3-207ENST00000511092 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-207ENST00000511092 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
CLCN3-207ENST00000511092 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-207ENST00000511092 MYO5BQ9ULV0 1848 aa10.5□□□□□ -0.73
CLCN3-207ENST00000511092 A0A0G2JS52 829 aa10.5□□□□□ -0.73
CLCN3-207ENST00000511092 HSPA1AP0DMV8 641 aaKnown RBP10.5□□□□□ -0.73
CLCN3-207ENST00000511092 HSPA1BP0DMV9 641 aaKnown RBP10.5□□□□□ -0.73
CLCN3-207ENST00000511092 MYT1Q01538 1121 aa10.5□□□□□ -0.73
CLCN3-207ENST00000511092 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-207ENST00000511092 PARD3Q8TEW0 1356 aa10.5□□□□□ -0.73
CLCN3-207ENST00000511092 G3V3G9 751 aa10.49□□□□□ -0.73
CLCN3-207ENST00000511092 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-207ENST00000511092 NBPF8Q3BBV2 869 aa10.49□□□□□ -0.73
CLCN3-207ENST00000511092 NBPF14Q5TI25 921 aa10.49□□□□□ -0.73
CLCN3-207ENST00000511092 NWD2Q9ULI1 1742 aa10.49□□□□□ -0.73
CLCN3-207ENST00000511092 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
CLCN3-207ENST00000511092 ST18O60284 1047 aa10.48□□□□□ -0.73
CLCN3-207ENST00000511092 TRIM37O94972 964 aa10.48□□□□□ -0.73
CLCN3-207ENST00000511092 DCCP43146 1447 aa10.48□□□□□ -0.73
CLCN3-207ENST00000511092 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 NRAPQ86VF7 1730 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 KIF3CO14782 793 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 APBA3O96018 575 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-207ENST00000511092 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-207ENST00000511092 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 DHX29Q7Z478 1369 aaKnown RBP10.47□□□□□ -0.73
CLCN3-207ENST00000511092 PTPN23Q9H3S7 1636 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 THSD7AQ9UPZ6 1657 aa10.47□□□□□ -0.73
CLCN3-207ENST00000511092 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
CLCN3-207ENST00000511092 ADCY9O60503 1353 aa10.46□□□□□ -0.74
CLCN3-207ENST00000511092 CLIP1P30622 1438 aa10.46□□□□□ -0.74
CLCN3-207ENST00000511092 TRPM2O94759 1503 aa10.46□□□□□ -0.74
CLCN3-207ENST00000511092 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-207ENST00000511092 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
CLCN3-207ENST00000511092 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
CLCN3-207ENST00000511092 NLRP6P59044 892 aa10.44□□□□□ -0.74
CLCN3-207ENST00000511092 BCANQ96GW7 911 aa10.44□□□□□ -0.74
CLCN3-207ENST00000511092 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
CLCN3-207ENST00000511092 VPS72Q15906 364 aa10.43□□□□□ -0.74
CLCN3-207ENST00000511092 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
CLCN3-207ENST00000511092 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
CLCN3-207ENST00000511092 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
CLCN3-207ENST00000511092 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-207ENST00000511092 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
CLCN3-207ENST00000511092 FBXO22Q8NEZ5 403 aa10.4□□□□□ -0.74
CLCN3-207ENST00000511092 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
CLCN3-207ENST00000511092 ATP1B4Q9UN42 357 aaPredicted RBP10.4□□□□□ -0.74
CLCN3-207ENST00000511092 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
CLCN3-207ENST00000511092 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.75
CLCN3-207ENST00000511092 XRN1Q8IZH2 1706 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms