RNA–Protein interactions for RNA: ENST00000511044.1

PCDH1-206, Transcript of protocadherin 1, humanhuman

TSL 1 (best)

Gene PCDH1, Length 2,674 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-206ENST00000511044 MINK1Q8N4C8 1332 aaPredicted RBP14.84□□□□□ -0.03
PCDH1-206ENST00000511044 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
PCDH1-206ENST00000511044 PRDM4Q9UKN5 801 aa14.84□□□□□ -0.03
PCDH1-206ENST00000511044 PTPRMP28827 1452 aa14.84□□□□□ -0.03
PCDH1-206ENST00000511044 LAMC1P11047 1609 aa14.84□□□□□ -0.03
PCDH1-206ENST00000511044 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
PCDH1-206ENST00000511044 SKAP1Q86WV1 359 aa14.83□□□□□ -0.03
PCDH1-206ENST00000511044 METP08581 1390 aa14.83□□□□□ -0.04
PCDH1-206ENST00000511044 TMF1P82094 1093 aa14.83□□□□□ -0.04
PCDH1-206ENST00000511044 PRAM1Q96QH2 718 aa14.83□□□□□ -0.04
PCDH1-206ENST00000511044 CENPJQ9HC77 1338 aaPredicted RBP14.83□□□□□ -0.04
PCDH1-206ENST00000511044 CLSTN1O94985 981 aa14.82□□□□□ -0.04
PCDH1-206ENST00000511044 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
PCDH1-206ENST00000511044 RBM33Q96EV2 1170 aaKnown RBP14.82□□□□□ -0.04
PCDH1-206ENST00000511044 EIF3AQ14152 1382 aaKnown RBP14.81□□□□□ -0.04
PCDH1-206ENST00000511044 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
PCDH1-206ENST00000511044 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
PCDH1-206ENST00000511044 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-206ENST00000511044 POGKQ9P215 609 aa14.81□□□□□ -0.04
PCDH1-206ENST00000511044 CEP170BQ9Y4F5 1589 aaPredicted RBP14.81□□□□□ -0.04
PCDH1-206ENST00000511044 NLRP1Q9C000 1473 aa14.81□□□□□ -0.04
PCDH1-206ENST00000511044 ARHGEF28Q8N1W1 1705 aaKnown RBP14.81□□□□□ -0.04
PCDH1-206ENST00000511044 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
PCDH1-206ENST00000511044 HSPA2P54652 639 aa14.8□□□□□ -0.04
PCDH1-206ENST00000511044 NUTM2FA1L443 756 aa14.79□□□□□ -0.04
PCDH1-206ENST00000511044 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
PCDH1-206ENST00000511044 YTHDC2Q9H6S0 1430 aaKnown RBP14.79□□□□□ -0.04
PCDH1-206ENST00000511044 BLMP54132 1417 aaPredicted RBP14.79□□□□□ -0.04
PCDH1-206ENST00000511044 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
PCDH1-206ENST00000511044 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
PCDH1-206ENST00000511044 CABP2Q9NPB3 220 aa14.79□□□□□ -0.04
PCDH1-206ENST00000511044 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
PCDH1-206ENST00000511044 SETBP1Q9Y6X0 1596 aa14.78□□□□□ -0.04
PCDH1-206ENST00000511044 RRAGDQ9NQL2 400 aaPredicted RBP14.78□□□□□ -0.04
PCDH1-206ENST00000511044 KDM4FA0A1W2PPD8 638 aa14.77□□□□□ -0.04
PCDH1-206ENST00000511044 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.77□□□□□ -0.04
PCDH1-206ENST00000511044 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.05
PCDH1-206ENST00000511044 SETD1AO15047 1707 aaKnown RBP14.77□□□□□ -0.05
PCDH1-206ENST00000511044 INSRP06213 1382 aa14.76□□□□□ -0.05
PCDH1-206ENST00000511044 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
PCDH1-206ENST00000511044 CALD1Q05682 793 aaKnown RBP14.75□□□□□ -0.05
PCDH1-206ENST00000511044 WDR43Q15061 677 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCDH1-206ENST00000511044 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
PCDH1-206ENST00000511044 ADAMTS13Q76LX8 1427 aa14.74□□□□□ -0.05
PCDH1-206ENST00000511044 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
PCDH1-206ENST00000511044 SLC12A5Q9H2X9 1139 aa14.74□□□□□ -0.05
PCDH1-206ENST00000511044 KNSTRNQ9Y448 316 aa14.74□□□□□ -0.05
PCDH1-206ENST00000511044 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
PCDH1-206ENST00000511044 KDM5AP29375 1690 aaKnown RBP14.72□□□□□ -0.05
PCDH1-206ENST00000511044 PPP2R1AP30153 589 aa14.71□□□□□ -0.05
PCDH1-206ENST00000511044 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.05
PCDH1-206ENST00000511044 MYOM1P52179 1685 aa14.71□□□□□ -0.05
PCDH1-206ENST00000511044 CENPQQ7L2Z9 268 aaPredicted RBP14.71□□□□□ -0.05
PCDH1-206ENST00000511044 PLEKHG1Q9ULL1 1385 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 KDM2BQ8NHM5 1336 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 DUSP27Q5VZP5 1158 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 ROBO2Q9HCK4 1378 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 PLCD4Q9BRC7 762 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 SLIT1O75093 1534 aa14.7□□□□□ -0.06
PCDH1-206ENST00000511044 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
PCDH1-206ENST00000511044 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-206ENST00000511044 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
PCDH1-206ENST00000511044 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
PCDH1-206ENST00000511044 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
PCDH1-206ENST00000511044 KCNA6P17658 529 aa14.68□□□□□ -0.06
PCDH1-206ENST00000511044 TNNT2P45379 298 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-206ENST00000511044 RGS3P49796 1198 aa14.68□□□□□ -0.06
PCDH1-206ENST00000511044 FAM43BQ6ZT52 329 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-206ENST00000511044 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
PCDH1-206ENST00000511044 ZNF142P52746 1687 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-206ENST00000511044 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
PCDH1-206ENST00000511044 PSMD1Q99460 953 aa14.67□□□□□ -0.06
PCDH1-206ENST00000511044 CDK19Q9BWU1 502 aa14.67□□□□□ -0.06
PCDH1-206ENST00000511044 ARID3AQ99856 593 aa14.66□□□□□ -0.06
PCDH1-206ENST00000511044 CDCA8Q53HL2 280 aa14.65□□□□□ -0.06
PCDH1-206ENST00000511044 CCDC146Q8IYE0 955 aa14.65□□□□□ -0.06
PCDH1-206ENST00000511044 CARD14Q9BXL6 1004 aa14.65□□□□□ -0.06
PCDH1-206ENST00000511044 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
PCDH1-206ENST00000511044 ZNF521Q96K83 1311 aa14.64□□□□□ -0.07
PCDH1-206ENST00000511044 C8orf34Q49A92 452 aa14.64□□□□□ -0.07
PCDH1-206ENST00000511044 PTMAP06454 111 aaKnown RBP14.63□□□□□ -0.07
PCDH1-206ENST00000511044 SLFN5Q08AF3 891 aa14.63□□□□□ -0.07
PCDH1-206ENST00000511044 ABCC11Q96J66 1382 aa14.63□□□□□ -0.07
PCDH1-206ENST00000511044 L1TD1Q5T7N2 865 aaKnown RBP14.63□□□□□ -0.07
PCDH1-206ENST00000511044 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
PCDH1-206ENST00000511044 CABP1Q9NZU7 370 aa14.63□□□□□ -0.07
PCDH1-206ENST00000511044 FAM193AP78312 1265 aa14.62□□□□□ -0.07
PCDH1-206ENST00000511044 SBNO2Q9Y2G9 1366 aa14.62□□□□□ -0.07
PCDH1-206ENST00000511044 RGS22Q8NE09 1264 aa14.61□□□□□ -0.07
PCDH1-206ENST00000511044 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-206ENST00000511044 NSD3Q9BZ95 1437 aa14.61□□□□□ -0.07
PCDH1-206ENST00000511044 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-206ENST00000511044 APAF1O14727 1248 aa14.61□□□□□ -0.07
PCDH1-206ENST00000511044 MED14O60244 1454 aa14.6□□□□□ -0.07
PCDH1-206ENST00000511044 MCCP23508 829 aa14.6□□□□□ -0.07
PCDH1-206ENST00000511044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
PCDH1-206ENST00000511044 TBX22Q9Y458 520 aa14.6□□□□□ -0.07
PCDH1-206ENST00000511044 NPHP4O75161 1426 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms