RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
LETM1-204ENST00000510940 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
LETM1-204ENST00000510940 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
LETM1-204ENST00000510940 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
LETM1-204ENST00000510940 FOXO3O43524 673 aa18.26■□□□□ 0.51
LETM1-204ENST00000510940 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
LETM1-204ENST00000510940 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
LETM1-204ENST00000510940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
LETM1-204ENST00000510940 NRKQ7Z2Y5 1582 aa18.25■□□□□ 0.51
LETM1-204ENST00000510940 FYB1O15117 783 aa18.25■□□□□ 0.51
LETM1-204ENST00000510940 COG3Q96JB2 828 aa18.25■□□□□ 0.51
LETM1-204ENST00000510940 ANKRD26Q9UPS8 1709 aa18.25■□□□□ 0.51
LETM1-204ENST00000510940 PARD3Q8TEW0 1356 aa18.25■□□□□ 0.51
LETM1-204ENST00000510940 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
LETM1-204ENST00000510940 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
LETM1-204ENST00000510940 KRT28Q7Z3Y7 464 aa18.24■□□□□ 0.51
LETM1-204ENST00000510940 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
LETM1-204ENST00000510940 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
LETM1-204ENST00000510940 MIER1Q8N108 512 aa18.23■□□□□ 0.51
LETM1-204ENST00000510940 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
LETM1-204ENST00000510940 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
LETM1-204ENST00000510940 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
LETM1-204ENST00000510940 USP31Q70CQ4 1352 aa18.2■□□□□ 0.5
LETM1-204ENST00000510940 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
LETM1-204ENST00000510940 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
LETM1-204ENST00000510940 NME9Q86XW9 330 aa18.19■□□□□ 0.5
LETM1-204ENST00000510940 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
LETM1-204ENST00000510940 NLRP6P59044 892 aa18.18■□□□□ 0.5
LETM1-204ENST00000510940 NHSL1Q5SYE7 1610 aa18.18■□□□□ 0.5
LETM1-204ENST00000510940 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
LETM1-204ENST00000510940 USP54Q70EL1 1684 aa18.17■□□□□ 0.5
LETM1-204ENST00000510940 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
LETM1-204ENST00000510940 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
LETM1-204ENST00000510940 PXDNQ92626 1479 aa18.16■□□□□ 0.5
LETM1-204ENST00000510940 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 KCNH5Q8NCM2 988 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 AHDC1Q5TGY3 1603 aaPredicted RBP18.15■□□□□ 0.5
LETM1-204ENST00000510940 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
LETM1-204ENST00000510940 PPP2R1AP30153 589 aa18.14■□□□□ 0.49
LETM1-204ENST00000510940 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
LETM1-204ENST00000510940 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
LETM1-204ENST00000510940 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
LETM1-204ENST00000510940 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
LETM1-204ENST00000510940 ALS2Q96Q42 1657 aa18.12■□□□□ 0.49
LETM1-204ENST00000510940 HSPA1LP34931 641 aa18.11■□□□□ 0.49
LETM1-204ENST00000510940 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
LETM1-204ENST00000510940 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
LETM1-204ENST00000510940 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
LETM1-204ENST00000510940 DDX17Q92841 729 aaKnown RBP18.1■□□□□ 0.49
LETM1-204ENST00000510940 KIF24Q5T7B8 1368 aa18.08■□□□□ 0.49
LETM1-204ENST00000510940 USP19O94966 1318 aa18.08■□□□□ 0.49
LETM1-204ENST00000510940 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.48
LETM1-204ENST00000510940 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
LETM1-204ENST00000510940 PHLPP1O60346 1717 aa18.08■□□□□ 0.48
LETM1-204ENST00000510940 MTHFSP49914 203 aa18.07■□□□□ 0.48
LETM1-204ENST00000510940 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
LETM1-204ENST00000510940 SLIT3O75094 1523 aa18.05■□□□□ 0.48
LETM1-204ENST00000510940 GCP02774 474 aa18.05■□□□□ 0.48
LETM1-204ENST00000510940 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
LETM1-204ENST00000510940 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
LETM1-204ENST00000510940 JCADQ9P266 1359 aa18.04■□□□□ 0.48
LETM1-204ENST00000510940 MARF1Q9Y4F3 1742 aaKnown RBP18.04■□□□□ 0.48
LETM1-204ENST00000510940 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
LETM1-204ENST00000510940 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
LETM1-204ENST00000510940 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
LETM1-204ENST00000510940 AMPHP49418 695 aa18.03■□□□□ 0.48
LETM1-204ENST00000510940 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
LETM1-204ENST00000510940 INSRP06213 1382 aa18.03■□□□□ 0.48
LETM1-204ENST00000510940 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.48
LETM1-204ENST00000510940 SOX12O15370 315 aa18.02■□□□□ 0.48
LETM1-204ENST00000510940 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.48
LETM1-204ENST00000510940 FLT4P35916 1363 aa18.02■□□□□ 0.47
LETM1-204ENST00000510940 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
LETM1-204ENST00000510940 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
LETM1-204ENST00000510940 PNPLA6Q8IY17 1366 aa18.01■□□□□ 0.47
LETM1-204ENST00000510940 NFAT5O94916 1531 aa18■□□□□ 0.47
LETM1-204ENST00000510940 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
LETM1-204ENST00000510940 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
LETM1-204ENST00000510940 COL22A1Q8NFW1 1626 aaPredicted RBP17.99■□□□□ 0.47
LETM1-204ENST00000510940 PHRF1Q9P1Y6 1649 aaKnown RBP17.99■□□□□ 0.47
LETM1-204ENST00000510940 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
LETM1-204ENST00000510940 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
LETM1-204ENST00000510940 LTN1O94822 1766 aa17.99■□□□□ 0.47
LETM1-204ENST00000510940 ABCC6O95255 1503 aa17.98■□□□□ 0.47
LETM1-204ENST00000510940 ARHGEF25Q86VW2 580 aa17.98■□□□□ 0.47
LETM1-204ENST00000510940 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
LETM1-204ENST00000510940 CPDO75976 1380 aa17.97■□□□□ 0.47
LETM1-204ENST00000510940 IP6K1Q92551 441 aa17.97■□□□□ 0.47
LETM1-204ENST00000510940 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
LETM1-204ENST00000510940 CRYBG1Q9Y4K1 1723 aa17.97■□□□□ 0.47
LETM1-204ENST00000510940 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
LETM1-204ENST00000510940 FBLN1P23142 703 aa17.95■□□□□ 0.46
LETM1-204ENST00000510940 HOXC9P31274 260 aa17.95■□□□□ 0.46
LETM1-204ENST00000510940 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
LETM1-204ENST00000510940 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
LETM1-204ENST00000510940 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms