RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
BRIX1-203ENST00000510834 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
BRIX1-203ENST00000510834 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
BRIX1-203ENST00000510834 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
BRIX1-203ENST00000510834 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
BRIX1-203ENST00000510834 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
BRIX1-203ENST00000510834 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
BRIX1-203ENST00000510834 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
BRIX1-203ENST00000510834 CDK12Q9NYV4 1490 aaPredicted RBP13.63□□□□□ -0.23
BRIX1-203ENST00000510834 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
BRIX1-203ENST00000510834 C20orf194Q5TEA3 1177 aa13.63□□□□□ -0.23
BRIX1-203ENST00000510834 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
BRIX1-203ENST00000510834 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
BRIX1-203ENST00000510834 LTKP29376 864 aa13.62□□□□□ -0.23
BRIX1-203ENST00000510834 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
BRIX1-203ENST00000510834 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
BRIX1-203ENST00000510834 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
BRIX1-203ENST00000510834 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
BRIX1-203ENST00000510834 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
BRIX1-203ENST00000510834 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
BRIX1-203ENST00000510834 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
BRIX1-203ENST00000510834 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
BRIX1-203ENST00000510834 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
BRIX1-203ENST00000510834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
BRIX1-203ENST00000510834 PTPRUQ92729 1446 aa13.6□□□□□ -0.23
BRIX1-203ENST00000510834 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
BRIX1-203ENST00000510834 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
BRIX1-203ENST00000510834 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
BRIX1-203ENST00000510834 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
BRIX1-203ENST00000510834 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
BRIX1-203ENST00000510834 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
BRIX1-203ENST00000510834 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
BRIX1-203ENST00000510834 BCAR3O75815 825 aa13.57□□□□□ -0.24
BRIX1-203ENST00000510834 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
BRIX1-203ENST00000510834 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
BRIX1-203ENST00000510834 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
BRIX1-203ENST00000510834 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
BRIX1-203ENST00000510834 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
BRIX1-203ENST00000510834 NME9Q86XW9 330 aa13.56□□□□□ -0.24
BRIX1-203ENST00000510834 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
BRIX1-203ENST00000510834 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
BRIX1-203ENST00000510834 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
BRIX1-203ENST00000510834 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
BRIX1-203ENST00000510834 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
BRIX1-203ENST00000510834 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
BRIX1-203ENST00000510834 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
BRIX1-203ENST00000510834 IL16Q14005 1332 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 FCHSD2O94868 740 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 COG3Q96JB2 828 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 USP6P35125 1406 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
BRIX1-203ENST00000510834 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
BRIX1-203ENST00000510834 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
BRIX1-203ENST00000510834 MS4A1P11836 297 aa13.53□□□□□ -0.24
BRIX1-203ENST00000510834 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
BRIX1-203ENST00000510834 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
BRIX1-203ENST00000510834 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
BRIX1-203ENST00000510834 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
BRIX1-203ENST00000510834 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
BRIX1-203ENST00000510834 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.24
BRIX1-203ENST00000510834 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
BRIX1-203ENST00000510834 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
BRIX1-203ENST00000510834 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
BRIX1-203ENST00000510834 PPM1GO15355 546 aaPredicted RBP13.51□□□□□ -0.25
BRIX1-203ENST00000510834 NEFMP07197 916 aa13.51□□□□□ -0.25
BRIX1-203ENST00000510834 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
BRIX1-203ENST00000510834 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
BRIX1-203ENST00000510834 ACEP12821 1306 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 TTC21BQ7Z4L5 1316 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 RIPK4P57078 832 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
BRIX1-203ENST00000510834 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
BRIX1-203ENST00000510834 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 IL13P35225 146 aa13.5□□□□□ -0.25
BRIX1-203ENST00000510834 FBLN1P23142 703 aa13.49□□□□□ -0.25
BRIX1-203ENST00000510834 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
BRIX1-203ENST00000510834 AAMPQ13685 434 aa13.49□□□□□ -0.25
BRIX1-203ENST00000510834 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
BRIX1-203ENST00000510834 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
BRIX1-203ENST00000510834 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
BRIX1-203ENST00000510834 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
BRIX1-203ENST00000510834 MSH5O43196 834 aa13.47□□□□□ -0.25
BRIX1-203ENST00000510834 PANK1Q8TE04 598 aa13.47□□□□□ -0.25
BRIX1-203ENST00000510834 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
BRIX1-203ENST00000510834 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
BRIX1-203ENST00000510834 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
BRIX1-203ENST00000510834 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.25
BRIX1-203ENST00000510834 EXOSC9Q06265 439 aaKnown RBP13.45□□□□□ -0.26
BRIX1-203ENST00000510834 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
BRIX1-203ENST00000510834 HMOX1P09601 288 aa13.45□□□□□ -0.26
BRIX1-203ENST00000510834 PDE4AP27815 886 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms