RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
NFKB1-209ENST00000510638 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
NFKB1-209ENST00000510638 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-209ENST00000510638 PANK3Q9H999 370 aa11.88□□□□□ -0.51
NFKB1-209ENST00000510638 NALCNQ8IZF0 1738 aa11.87□□□□□ -0.51
NFKB1-209ENST00000510638 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
NFKB1-209ENST00000510638 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
NFKB1-209ENST00000510638 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
NFKB1-209ENST00000510638 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
NFKB1-209ENST00000510638 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
NFKB1-209ENST00000510638 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
NFKB1-209ENST00000510638 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-209ENST00000510638 C1orf167Q5SNV9 1468 aa11.86□□□□□ -0.51
NFKB1-209ENST00000510638 MST1RQ04912 1400 aa11.86□□□□□ -0.51
NFKB1-209ENST00000510638 ACEP12821 1306 aa11.86□□□□□ -0.51
NFKB1-209ENST00000510638 YY1P25490 414 aa11.85□□□□□ -0.51
NFKB1-209ENST00000510638 ATRNO75882 1429 aa11.85□□□□□ -0.51
NFKB1-209ENST00000510638 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
NFKB1-209ENST00000510638 ORAI2Q96SN7 254 aa11.84□□□□□ -0.51
NFKB1-209ENST00000510638 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 A0A1W2PP64 1363 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
NFKB1-209ENST00000510638 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-209ENST00000510638 PSME1Q06323 249 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
NFKB1-209ENST00000510638 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
NFKB1-209ENST00000510638 POLR3AO14802 1390 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-209ENST00000510638 CPSF1Q10570 1443 aaKnown RBP11.82□□□□□ -0.52
NFKB1-209ENST00000510638 BRD4O60885 1362 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-209ENST00000510638 FOXO3O43524 673 aa11.81□□□□□ -0.52
NFKB1-209ENST00000510638 USP21Q9UK80 565 aa11.81□□□□□ -0.52
NFKB1-209ENST00000510638 CHD4Q14839 1912 aa11.81□□□□□ -0.52
NFKB1-209ENST00000510638 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
NFKB1-209ENST00000510638 NSD3Q9BZ95 1437 aa11.8□□□□□ -0.52
NFKB1-209ENST00000510638 ANP32CO43423 234 aa11.8□□□□□ -0.52
NFKB1-209ENST00000510638 CARD14Q9BXL6 1004 aa11.8□□□□□ -0.52
NFKB1-209ENST00000510638 USP32Q8NFA0 1604 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 USP6P35125 1406 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-209ENST00000510638 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
NFKB1-209ENST00000510638 KRT28Q7Z3Y7 464 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.52
NFKB1-209ENST00000510638 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-209ENST00000510638 RGPD1P0DJD0 1748 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
NFKB1-209ENST00000510638 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
NFKB1-209ENST00000510638 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
NFKB1-209ENST00000510638 TTC21BQ7Z4L5 1316 aa11.78□□□□□ -0.52
NFKB1-209ENST00000510638 NSD2O96028 1365 aa11.78□□□□□ -0.52
NFKB1-209ENST00000510638 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
NFKB1-209ENST00000510638 MYOM1P52179 1685 aa11.77□□□□□ -0.53
NFKB1-209ENST00000510638 KIF1AQ12756 1690 aa11.77□□□□□ -0.53
NFKB1-209ENST00000510638 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.53
NFKB1-209ENST00000510638 XPCQ01831 940 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-209ENST00000510638 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-209ENST00000510638 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-209ENST00000510638 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
NFKB1-209ENST00000510638 COG3Q96JB2 828 aa11.76□□□□□ -0.53
NFKB1-209ENST00000510638 RALBP1Q15311 655 aa11.75□□□□□ -0.53
NFKB1-209ENST00000510638 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
NFKB1-209ENST00000510638 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
NFKB1-209ENST00000510638 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
NFKB1-209ENST00000510638 FYB1O15117 783 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 ADAMTS2O95450 1211 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 DEFB132Q7Z7B7 95 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 NME9Q86XW9 330 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 GGNBP2Q9H3C7 697 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 SOS2Q07890 1332 aaPredicted RBP11.74□□□□□ -0.53
NFKB1-209ENST00000510638 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 GLI3P10071 1580 aa11.74□□□□□ -0.53
NFKB1-209ENST00000510638 NLRP6P59044 892 aa11.73□□□□□ -0.53
NFKB1-209ENST00000510638 NLRP13Q86W25 1043 aa11.73□□□□□ -0.53
NFKB1-209ENST00000510638 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
NFKB1-209ENST00000510638 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
NFKB1-209ENST00000510638 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-209ENST00000510638 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.53
NFKB1-209ENST00000510638 USP31Q70CQ4 1352 aa11.71□□□□□ -0.53
NFKB1-209ENST00000510638 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
NFKB1-209ENST00000510638 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-209ENST00000510638 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
NFKB1-209ENST00000510638 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
NFKB1-209ENST00000510638 PXDNQ92626 1479 aa11.7□□□□□ -0.54
NFKB1-209ENST00000510638 NWD2Q9ULI1 1742 aa11.7□□□□□ -0.54
NFKB1-209ENST00000510638 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
NFKB1-209ENST00000510638 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
NFKB1-209ENST00000510638 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
NFKB1-209ENST00000510638 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
NFKB1-209ENST00000510638 BAG6P46379 1132 aa11.69□□□□□ -0.54
NFKB1-209ENST00000510638 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-209ENST00000510638 KCNH5Q8NCM2 988 aa11.69□□□□□ -0.54
NFKB1-209ENST00000510638 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
NFKB1-209ENST00000510638 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
NFKB1-209ENST00000510638 TNNT2P45379 298 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-209ENST00000510638 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-209ENST00000510638 RGPD8O14715 1765 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms