RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 NLRP6P59044 892 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 FAM182BQ5T319 152 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 LAMC1P11047 1609 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
PROM1-210ENST00000510224 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
PROM1-210ENST00000510224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
PROM1-210ENST00000510224 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
PROM1-210ENST00000510224 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
PROM1-210ENST00000510224 FMN2Q9NZ56 1722 aa11.11□□□□□ -0.63
PROM1-210ENST00000510224 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
PROM1-210ENST00000510224 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
PROM1-210ENST00000510224 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 RGS12O14924 1447 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 EIF4G2P78344 907 aaKnown RBP eCLIP11.1□□□□□ -0.63
PROM1-210ENST00000510224 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 DLC1Q96QB1 1528 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 KNDC1Q76NI1 1749 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 EP400Q96L91 3159 aa11.1□□□□□ -0.63
PROM1-210ENST00000510224 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
PROM1-210ENST00000510224 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
PROM1-210ENST00000510224 USP47Q96K76 1375 aa11.09□□□□□ -0.63
PROM1-210ENST00000510224 BCL9LQ86UU0 1499 aa11.08□□□□□ -0.64
PROM1-210ENST00000510224 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
PROM1-210ENST00000510224 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
PROM1-210ENST00000510224 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
PROM1-210ENST00000510224 ATAD2Q6PL18 1390 aa11.07□□□□□ -0.64
PROM1-210ENST00000510224 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
PROM1-210ENST00000510224 GCP02774 474 aa11.07□□□□□ -0.64
PROM1-210ENST00000510224 VPS72Q15906 364 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 KRT27Q7Z3Y8 459 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 KIF1AQ12756 1690 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 ATP7BP35670 1465 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 TMF1P82094 1093 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
PROM1-210ENST00000510224 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
PROM1-210ENST00000510224 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
PROM1-210ENST00000510224 RALGAPBQ86X10 1494 aa11.04□□□□□ -0.64
PROM1-210ENST00000510224 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
PROM1-210ENST00000510224 ATRNO75882 1429 aa11.04□□□□□ -0.64
PROM1-210ENST00000510224 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
PROM1-210ENST00000510224 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
PROM1-210ENST00000510224 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
PROM1-210ENST00000510224 USP32Q8NFA0 1604 aa11.04□□□□□ -0.64
PROM1-210ENST00000510224 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
PROM1-210ENST00000510224 LTV1Q96GA3 475 aaPredicted RBP11.03□□□□□ -0.64
PROM1-210ENST00000510224 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.65
PROM1-210ENST00000510224 NME9Q86XW9 330 aa11.02□□□□□ -0.65
PROM1-210ENST00000510224 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
PROM1-210ENST00000510224 TTC21BQ7Z4L5 1316 aa11.01□□□□□ -0.65
PROM1-210ENST00000510224 SLIT2O94813 1529 aa11.01□□□□□ -0.65
PROM1-210ENST00000510224 TERF2IPQ9NYB0 399 aa11.01□□□□□ -0.65
PROM1-210ENST00000510224 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
PROM1-210ENST00000510224 CDCA8Q53HL2 280 aa11□□□□□ -0.65
PROM1-210ENST00000510224 ADGRB2O60241 1585 aa11□□□□□ -0.65
PROM1-210ENST00000510224 TRIM37O94972 964 aa11□□□□□ -0.65
PROM1-210ENST00000510224 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
PROM1-210ENST00000510224 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
PROM1-210ENST00000510224 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
PROM1-210ENST00000510224 TESK2Q96S53 571 aa10.99□□□□□ -0.65
PROM1-210ENST00000510224 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
PROM1-210ENST00000510224 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
PROM1-210ENST00000510224 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
PROM1-210ENST00000510224 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
PROM1-210ENST00000510224 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
PROM1-210ENST00000510224 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
PROM1-210ENST00000510224 QRICH2Q9H0J4 1663 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 BAG6P46379 1132 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 USP6P35125 1406 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 FBLN1P23142 703 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
PROM1-210ENST00000510224 SPATA31A1Q5TZJ5 1347 aa10.97□□□□□ -0.65
PROM1-210ENST00000510224 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
PROM1-210ENST00000510224 KCNH5Q8NCM2 988 aa10.97□□□□□ -0.65
PROM1-210ENST00000510224 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
PROM1-210ENST00000510224 KIAA1210Q9ULL0 1709 aa10.96□□□□□ -0.65
PROM1-210ENST00000510224 APBA3O96018 575 aa10.96□□□□□ -0.65
PROM1-210ENST00000510224 ITSN1Q15811 1721 aa10.96□□□□□ -0.65
PROM1-210ENST00000510224 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.66
PROM1-210ENST00000510224 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
PROM1-210ENST00000510224 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
PROM1-210ENST00000510224 GLI3P10071 1580 aa10.95□□□□□ -0.66
PROM1-210ENST00000510224 AMPHP49418 695 aa10.95□□□□□ -0.66
PROM1-210ENST00000510224 DDB1Q16531 1140 aa10.95□□□□□ -0.66
PROM1-210ENST00000510224 COG3Q96JB2 828 aa10.94□□□□□ -0.66
PROM1-210ENST00000510224 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
PROM1-210ENST00000510224 FAM196AQ6ZSG2 479 aa10.93□□□□□ -0.66
PROM1-210ENST00000510224 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
PROM1-210ENST00000510224 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
PROM1-210ENST00000510224 SSH2Q76I76 1423 aa10.93□□□□□ -0.66
PROM1-210ENST00000510224 TRPM3Q9HCF6 1732 aaPredicted RBP10.93□□□□□ -0.66
PROM1-210ENST00000510224 ONECUT3O60422 494 aaPredicted RBP10.93□□□□□ -0.66
PROM1-210ENST00000510224 USP19O94966 1318 aa10.93□□□□□ -0.66
PROM1-210ENST00000510224 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
PROM1-210ENST00000510224 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
PROM1-210ENST00000510224 PLCH1Q4KWH8 1693 aa10.92□□□□□ -0.66
PROM1-210ENST00000510224 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
PROM1-210ENST00000510224 R3HDM1Q15032 1099 aaKnown RBP10.92□□□□□ -0.66
PROM1-210ENST00000510224 RRS1Q15050 365 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms