RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 BRD4O60885 1362 aaPredicted RBP30.23■■■□□ 2.43
UBE2D3-229ENST00000510129 TRPC5Q9UL62 973 aaPredicted RBP30.22■■■□□ 2.43
UBE2D3-229ENST00000510129 RBM6P78332 1123 aaKnown RBP30.21■■■□□ 2.43
UBE2D3-229ENST00000510129 SLC24A1O60721 1099 aa30.2■■■□□ 2.43
UBE2D3-229ENST00000510129 ABCA3Q99758 1704 aa30.19■■■□□ 2.42
UBE2D3-229ENST00000510129 ATAD2Q6PL18 1390 aa30.18■■■□□ 2.42
UBE2D3-229ENST00000510129 CABLES1Q8TDN4 633 aa30.16■■■□□ 2.42
UBE2D3-229ENST00000510129 BCL9LQ86UU0 1499 aa30.14■■■□□ 2.42
UBE2D3-229ENST00000510129 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.14■■■□□ 2.42
UBE2D3-229ENST00000510129 CABP1Q9NZU7 370 aa30.14■■■□□ 2.42
UBE2D3-229ENST00000510129 ATRNO75882 1429 aa30.13■■■□□ 2.41
UBE2D3-229ENST00000510129 SLIT2O94813 1529 aa30.13■■■□□ 2.41
UBE2D3-229ENST00000510129 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
UBE2D3-229ENST00000510129 UNC5CLQ8IV45 518 aa30.11■■■□□ 2.41
UBE2D3-229ENST00000510129 ZNF692Q9BU19 519 aaPredicted RBP30.11■■■□□ 2.41
UBE2D3-229ENST00000510129 NWD2Q9ULI1 1742 aa30.1■■■□□ 2.41
UBE2D3-229ENST00000510129 PUS7Q96PZ0 661 aaKnown RBP30.1■■■□□ 2.41
UBE2D3-229ENST00000510129 PLEKHG5O94827 1062 aa30.09■■■□□ 2.41
UBE2D3-229ENST00000510129 USP6P35125 1406 aa30.08■■■□□ 2.41
UBE2D3-229ENST00000510129 ABTB2Q8N961 1025 aa30.08■■■□□ 2.41
UBE2D3-229ENST00000510129 CRYBG1Q9Y4K1 1723 aa30.08■■■□□ 2.41
UBE2D3-229ENST00000510129 COL14A1Q05707 1796 aaKnown RBP30.05■■■□□ 2.4
UBE2D3-229ENST00000510129 PLCH1Q4KWH8 1693 aa30.05■■■□□ 2.4
UBE2D3-229ENST00000510129 NLRP13Q86W25 1043 aa30.05■■■□□ 2.4
UBE2D3-229ENST00000510129 GJD4Q96KN9 370 aaPredicted RBP30.04■■■□□ 2.4
UBE2D3-229ENST00000510129 FAM83GA6ND36 823 aa30.03■■■□□ 2.4
UBE2D3-229ENST00000510129 ST20-MTHFSA0A0A6YYL1 179 aa30.02■■■□□ 2.4
UBE2D3-229ENST00000510129 PHRF1Q9P1Y6 1649 aaKnown RBP30.02■■■□□ 2.4
UBE2D3-229ENST00000510129 RGS12O14924 1447 aa30.02■■■□□ 2.4
UBE2D3-229ENST00000510129 PRDM11Q9NQV5 511 aa30.01■■■□□ 2.39
UBE2D3-229ENST00000510129 VPS72Q15906 364 aa30■■■□□ 2.39
UBE2D3-229ENST00000510129 USP47Q96K76 1375 aa30■■■□□ 2.39
UBE2D3-229ENST00000510129 AKAP12Q02952 1782 aa30■■■□□ 2.39
UBE2D3-229ENST00000510129 CPSF1Q10570 1443 aaKnown RBP29.99■■■□□ 2.39
UBE2D3-229ENST00000510129 USP19O94966 1318 aa29.98■■■□□ 2.39
UBE2D3-229ENST00000510129 SSH2Q76I76 1423 aa29.98■■■□□ 2.39
UBE2D3-229ENST00000510129 NUTM2GQ5VZR2 741 aa29.98■■■□□ 2.39
UBE2D3-229ENST00000510129 TESK2Q96S53 571 aa29.98■■■□□ 2.39
UBE2D3-229ENST00000510129 NINLQ9Y2I6 1382 aa29.98■■■□□ 2.39
UBE2D3-229ENST00000510129 TTC21AQ8NDW8 1320 aa29.97■■■□□ 2.39
UBE2D3-229ENST00000510129 KTN1Q86UP2 1357 aaKnown RBP29.96■■■□□ 2.39
UBE2D3-229ENST00000510129 BTG4Q9NY30 223 aa29.96■■■□□ 2.39
UBE2D3-229ENST00000510129 CPDO75976 1380 aa29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 KIAA0232Q92628 1395 aa29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 NLRP6P59044 892 aa29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 HDGFL2Q7Z4V5 671 aaPredicted RBP29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 TERF2IPQ9NYB0 399 aa29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 NRKQ7Z2Y5 1582 aa29.94■■■□□ 2.38
UBE2D3-229ENST00000510129 TMF1P82094 1093 aa29.93■■■□□ 2.38
UBE2D3-229ENST00000510129 TMC1Q8TDI8 760 aa29.93■■■□□ 2.38
UBE2D3-229ENST00000510129 CCDC9Q9Y3X0 531 aaKnown RBP29.93■■■□□ 2.38
UBE2D3-229ENST00000510129 TTC21BQ7Z4L5 1316 aa29.93■■■□□ 2.38
UBE2D3-229ENST00000510129 CDCA8Q53HL2 280 aa29.92■■■□□ 2.38
UBE2D3-229ENST00000510129 NRAPQ86VF7 1730 aa29.92■■■□□ 2.38
UBE2D3-229ENST00000510129 MON2Q7Z3U7 1717 aa29.91■■■□□ 2.38
UBE2D3-229ENST00000510129 GCP02774 474 aa29.91■■■□□ 2.38
UBE2D3-229ENST00000510129 GLI3P10071 1580 aa29.9■■■□□ 2.38
UBE2D3-229ENST00000510129 PIK3C2AO00443 1686 aa29.89■■■□□ 2.38
UBE2D3-229ENST00000510129 ZC3H6P61129 1189 aaKnown RBP29.89■■■□□ 2.38
UBE2D3-229ENST00000510129 SLIT3O75094 1523 aa29.87■■■□□ 2.37
UBE2D3-229ENST00000510129 KCNH5Q8NCM2 988 aa29.87■■■□□ 2.37
UBE2D3-229ENST00000510129 SLC12A5Q9H2X9 1139 aa29.86■■■□□ 2.37
UBE2D3-229ENST00000510129 ONECUT3O60422 494 aaPredicted RBP29.85■■■□□ 2.37
UBE2D3-229ENST00000510129 EDC4Q6P2E9 1401 aaKnown RBP29.85■■■□□ 2.37
UBE2D3-229ENST00000510129 CD163L1Q9NR16 1453 aa29.85■■■□□ 2.37
UBE2D3-229ENST00000510129 CHRNA2Q15822 529 aa29.84■■■□□ 2.37
UBE2D3-229ENST00000510129 UPF1Q92900 1129 aaKnown RBP eCLIP29.84■■■□□ 2.37
UBE2D3-229ENST00000510129 SPATA31A5Q5VU36 1347 aa29.81■■■□□ 2.36
UBE2D3-229ENST00000510129 SPATA31A7Q8IWB4 1347 aa29.81■■■□□ 2.36
UBE2D3-229ENST00000510129 EVA1CP58658 441 aa29.81■■■□□ 2.36
UBE2D3-229ENST00000510129 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
UBE2D3-229ENST00000510129 USP31Q70CQ4 1352 aa29.8■■■□□ 2.36
UBE2D3-229ENST00000510129 LMO7Q8WWI1 1683 aa29.79■■■□□ 2.36
UBE2D3-229ENST00000510129 SEPT12Q8IYM1 358 aa29.79■■■□□ 2.36
UBE2D3-229ENST00000510129 AATKQ6ZMQ8 1374 aa29.78■■■□□ 2.36
UBE2D3-229ENST00000510129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.78■■■□□ 2.36
UBE2D3-229ENST00000510129 USP54Q70EL1 1684 aa29.78■■■□□ 2.36
UBE2D3-229ENST00000510129 STRN4Q9NRL3 753 aa29.77■■■□□ 2.36
UBE2D3-229ENST00000510129 ANKRD36BQ8N2N9 1353 aa29.76■■■□□ 2.35
UBE2D3-229ENST00000510129 CAMTA1Q9Y6Y1 1673 aa29.76■■■□□ 2.35
UBE2D3-229ENST00000510129 SPATA31A1Q5TZJ5 1347 aa29.74■■■□□ 2.35
UBE2D3-229ENST00000510129 EIF4G2P78344 907 aaKnown RBP eCLIP29.74■■■□□ 2.35
UBE2D3-229ENST00000510129 CCDC125Q86Z20 511 aa29.74■■■□□ 2.35
UBE2D3-229ENST00000510129 A0A0G2JS52 829 aa29.73■■■□□ 2.35
UBE2D3-229ENST00000510129 MYT1Q01538 1121 aa29.73■■■□□ 2.35
UBE2D3-229ENST00000510129 FAM98CQ17RN3 349 aaKnown RBP29.73■■■□□ 2.35
UBE2D3-229ENST00000510129 ABCC6O95255 1503 aa29.72■■■□□ 2.35
UBE2D3-229ENST00000510129 ARHGEF25Q86VW2 580 aa29.71■■■□□ 2.35
UBE2D3-229ENST00000510129 COL5A2P05997 1499 aaPredicted RBP29.71■■■□□ 2.35
UBE2D3-229ENST00000510129 KRT27Q7Z3Y8 459 aa29.7■■■□□ 2.35
UBE2D3-229ENST00000510129 NME9Q86XW9 330 aa29.7■■■□□ 2.35
UBE2D3-229ENST00000510129 THRAP3Q9Y2W1 955 aaKnown RBP29.7■■■□□ 2.35
UBE2D3-229ENST00000510129 ZBTB7CA1YPR0 619 aa29.69■■■□□ 2.34
UBE2D3-229ENST00000510129 NFAT5O94916 1531 aa29.69■■■□□ 2.34
UBE2D3-229ENST00000510129 BARGINQ6ZT62 677 aa29.68■■■□□ 2.34
UBE2D3-229ENST00000510129 BRWD3Q6RI45 1802 aa29.68■■■□□ 2.34
UBE2D3-229ENST00000510129 THSD7AQ9UPZ6 1657 aa29.66■■■□□ 2.34
UBE2D3-229ENST00000510129 CRB1P82279 1406 aa29.66■■■□□ 2.34
UBE2D3-229ENST00000510129 LARP1Q6PKG0 1096 aaKnown RBP29.66■■■□□ 2.34
UBE2D3-229ENST00000510129 TCP11L2Q8N4U5 519 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms