RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
RAB40C-202ENST00000509637 GPRASP1Q5JY77 1395 aa23.39■■□□□ 1.33
RAB40C-202ENST00000509637 HRCP23327 699 aa23.38■■□□□ 1.33
RAB40C-202ENST00000509637 NGDNQ8NEJ9 315 aaKnown RBP23.38■■□□□ 1.33
RAB40C-202ENST00000509637 COL14A1Q05707 1796 aaKnown RBP23.37■■□□□ 1.33
RAB40C-202ENST00000509637 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
RAB40C-202ENST00000509637 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
RAB40C-202ENST00000509637 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
RAB40C-202ENST00000509637 PAK3O75914 559 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-202ENST00000509637 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
RAB40C-202ENST00000509637 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
RAB40C-202ENST00000509637 NUTM2GQ5VZR2 741 aa23.34■■□□□ 1.33
RAB40C-202ENST00000509637 STAC3Q96MF2 364 aa23.34■■□□□ 1.33
RAB40C-202ENST00000509637 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
RAB40C-202ENST00000509637 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
RAB40C-202ENST00000509637 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
RAB40C-202ENST00000509637 A0A0G2JS52 829 aa23.3■■□□□ 1.32
RAB40C-202ENST00000509637 MYT1Q01538 1121 aa23.3■■□□□ 1.32
RAB40C-202ENST00000509637 PRDM11Q9NQV5 511 aa23.3■■□□□ 1.32
RAB40C-202ENST00000509637 ACEP12821 1306 aa23.3■■□□□ 1.32
RAB40C-202ENST00000509637 POLR3AO14802 1390 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-202ENST00000509637 ZC3H6P61129 1189 aaKnown RBP23.29■■□□□ 1.32
RAB40C-202ENST00000509637 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
RAB40C-202ENST00000509637 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-202ENST00000509637 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-202ENST00000509637 SF3B2Q13435 895 aaKnown RBP23.28■■□□□ 1.32
RAB40C-202ENST00000509637 PHRF1Q9P1Y6 1649 aaKnown RBP23.28■■□□□ 1.32
RAB40C-202ENST00000509637 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
RAB40C-202ENST00000509637 SPATA31A1Q5TZJ5 1347 aa23.28■■□□□ 1.32
RAB40C-202ENST00000509637 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
RAB40C-202ENST00000509637 ITSN1Q15811 1721 aa23.25■■□□□ 1.31
RAB40C-202ENST00000509637 CCDC61Q9Y6R9 512 aa23.25■■□□□ 1.31
RAB40C-202ENST00000509637 STRN4Q9NRL3 753 aa23.24■■□□□ 1.31
RAB40C-202ENST00000509637 CAMTA1Q9Y6Y1 1673 aa23.23■■□□□ 1.31
RAB40C-202ENST00000509637 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
RAB40C-202ENST00000509637 BAG6P46379 1132 aa23.22■■□□□ 1.31
RAB40C-202ENST00000509637 TNS1Q9HBL0 1735 aaKnown RBP23.21■■□□□ 1.31
RAB40C-202ENST00000509637 EZH2Q15910 746 aaKnown RBP23.2■■□□□ 1.3
RAB40C-202ENST00000509637 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
RAB40C-202ENST00000509637 NRKQ7Z2Y5 1582 aa23.19■■□□□ 1.3
RAB40C-202ENST00000509637 USP19O94966 1318 aa23.19■■□□□ 1.3
RAB40C-202ENST00000509637 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
RAB40C-202ENST00000509637 CAMKK2Q96RR4 588 aa23.18■■□□□ 1.3
RAB40C-202ENST00000509637 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
RAB40C-202ENST00000509637 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
RAB40C-202ENST00000509637 SSH2Q76I76 1423 aa23.17■■□□□ 1.3
RAB40C-202ENST00000509637 LMO7Q8WWI1 1683 aa23.17■■□□□ 1.3
RAB40C-202ENST00000509637 TRIM37O94972 964 aa23.17■■□□□ 1.3
RAB40C-202ENST00000509637 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
RAB40C-202ENST00000509637 LRP5O75197 1615 aa23.17■■□□□ 1.3
RAB40C-202ENST00000509637 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
RAB40C-202ENST00000509637 R3HDM1Q15032 1099 aaKnown RBP23.15■■□□□ 1.3
RAB40C-202ENST00000509637 BARGINQ6ZT62 677 aa23.14■■□□□ 1.29
RAB40C-202ENST00000509637 PPIP5K1Q6PFW1 1433 aa23.14■■□□□ 1.29
RAB40C-202ENST00000509637 CPDO75976 1380 aa23.14■■□□□ 1.29
RAB40C-202ENST00000509637 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-202ENST00000509637 GCP02774 474 aa23.13■■□□□ 1.29
RAB40C-202ENST00000509637 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
RAB40C-202ENST00000509637 SRPK2P78362 688 aaKnown RBP23.12■■□□□ 1.29
RAB40C-202ENST00000509637 SIN3AQ96ST3 1273 aa23.12■■□□□ 1.29
RAB40C-202ENST00000509637 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
RAB40C-202ENST00000509637 EVA1CP58658 441 aa23.11■■□□□ 1.29
RAB40C-202ENST00000509637 FAM196AQ6ZSG2 479 aa23.1■■□□□ 1.29
RAB40C-202ENST00000509637 NLRP13Q86W25 1043 aa23.08■■□□□ 1.29
RAB40C-202ENST00000509637 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
RAB40C-202ENST00000509637 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
RAB40C-202ENST00000509637 COL5A2P05997 1499 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-202ENST00000509637 APBA3O96018 575 aa23.07■■□□□ 1.28
RAB40C-202ENST00000509637 USP6P35125 1406 aa23.07■■□□□ 1.28
RAB40C-202ENST00000509637 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
RAB40C-202ENST00000509637 COL18A1P39060 1754 aa23.04■■□□□ 1.28
RAB40C-202ENST00000509637 PTF1AQ7RTS3 328 aa23.04■■□□□ 1.28
RAB40C-202ENST00000509637 SLIT3O75094 1523 aa23.03■■□□□ 1.28
RAB40C-202ENST00000509637 NLRP6P59044 892 aa23.03■■□□□ 1.28
RAB40C-202ENST00000509637 PDE3BQ13370 1112 aa23.03■■□□□ 1.28
RAB40C-202ENST00000509637 PIK3C2AO00443 1686 aa23.02■■□□□ 1.28
RAB40C-202ENST00000509637 RREB1Q92766 1687 aa23.02■■□□□ 1.28
RAB40C-202ENST00000509637 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
RAB40C-202ENST00000509637 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
RAB40C-202ENST00000509637 NUP188Q5SRE5 1749 aa23■■□□□ 1.27
RAB40C-202ENST00000509637 AATKQ6ZMQ8 1374 aa23■■□□□ 1.27
RAB40C-202ENST00000509637 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
RAB40C-202ENST00000509637 PARP4Q9UKK3 1724 aaKnown RBP22.99■■□□□ 1.27
RAB40C-202ENST00000509637 THRAP3Q9Y2W1 955 aaKnown RBP22.99■■□□□ 1.27
RAB40C-202ENST00000509637 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-202ENST00000509637 CRB1P82279 1406 aa22.99■■□□□ 1.27
RAB40C-202ENST00000509637 TTC21BQ7Z4L5 1316 aa22.96■■□□□ 1.27
RAB40C-202ENST00000509637 NEUROD1Q13562 356 aa22.95■■□□□ 1.26
RAB40C-202ENST00000509637 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
RAB40C-202ENST00000509637 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
RAB40C-202ENST00000509637 RGPD5Q99666 1765 aa22.95■■□□□ 1.26
RAB40C-202ENST00000509637 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
RAB40C-202ENST00000509637 SBF2Q86WG5 1849 aa22.94■■□□□ 1.26
RAB40C-202ENST00000509637 LRRC37A3O60309 1634 aa22.93■■□□□ 1.26
RAB40C-202ENST00000509637 CPSF1Q10570 1443 aaKnown RBP22.92■■□□□ 1.26
RAB40C-202ENST00000509637 AKAP12Q02952 1782 aa22.92■■□□□ 1.26
RAB40C-202ENST00000509637 PROM2Q8N271 834 aa22.92■■□□□ 1.26
RAB40C-202ENST00000509637 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
RAB40C-202ENST00000509637 WDR17Q8IZU2 1322 aa22.9■■□□□ 1.26
RAB40C-202ENST00000509637 SOX12O15370 315 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms