RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 ZNF511Q8NB15 262 aa10.97□□□□□ -0.65
CAST-227ENST00000509602 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
CAST-227ENST00000509602 VARSP26640 1264 aaKnown RBP10.96□□□□□ -0.65
CAST-227ENST00000509602 KIFC2Q96AC6 838 aa10.96□□□□□ -0.65
CAST-227ENST00000509602 CFAP99D6REC4 459 aa10.95□□□□□ -0.66
CAST-227ENST00000509602 MYSM1Q5VVJ2 828 aa10.95□□□□□ -0.66
CAST-227ENST00000509602 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
CAST-227ENST00000509602 CABLES1Q8TDN4 633 aa10.94□□□□□ -0.66
CAST-227ENST00000509602 SIAH2O43255 324 aa10.93□□□□□ -0.66
CAST-227ENST00000509602 AGERQ15109 404 aa10.93□□□□□ -0.66
CAST-227ENST00000509602 FAM174AQ8TBP5 190 aa10.93□□□□□ -0.66
CAST-227ENST00000509602 BCANQ96GW7 911 aa10.93□□□□□ -0.66
CAST-227ENST00000509602 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
CAST-227ENST00000509602 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
CAST-227ENST00000509602 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
CAST-227ENST00000509602 ARMC2Q8NEN0 867 aa10.91□□□□□ -0.66
CAST-227ENST00000509602 TRIM47Q96LD4 638 aa10.91□□□□□ -0.66
CAST-227ENST00000509602 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
CAST-227ENST00000509602 TLL2Q9Y6L7 1015 aa10.91□□□□□ -0.66
CAST-227ENST00000509602 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
CAST-227ENST00000509602 MAP10Q9P2G4 905 aa10.9□□□□□ -0.66
CAST-227ENST00000509602 LIMD1Q9UGP4 676 aa10.9□□□□□ -0.66
CAST-227ENST00000509602 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
CAST-227ENST00000509602 QPCTQ16769 361 aa10.87□□□□□ -0.67
CAST-227ENST00000509602 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
CAST-227ENST00000509602 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
CAST-227ENST00000509602 MPNDQ8N594 471 aa10.87□□□□□ -0.67
CAST-227ENST00000509602 LILRB3O75022 631 aa10.86□□□□□ -0.67
CAST-227ENST00000509602 WFS1O76024 890 aa10.86□□□□□ -0.67
CAST-227ENST00000509602 NNTQ13423 1086 aa10.86□□□□□ -0.67
CAST-227ENST00000509602 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
CAST-227ENST00000509602 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
CAST-227ENST00000509602 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
CAST-227ENST00000509602 SNRPBP14678 240 aaKnown RBP10.84□□□□□ -0.67
CAST-227ENST00000509602 ADH1CP00326 375 aa10.83□□□□□ -0.68
CAST-227ENST00000509602 BMP1P13497 986 aa10.83□□□□□ -0.68
CAST-227ENST00000509602 FOXJ1Q92949 421 aa10.83□□□□□ -0.68
CAST-227ENST00000509602 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
CAST-227ENST00000509602 SCARF1Q14162 830 aa10.82□□□□□ -0.68
CAST-227ENST00000509602 WDR4P57081 412 aaKnown RBP10.81□□□□□ -0.68
CAST-227ENST00000509602 NR5A1Q13285 461 aa10.79□□□□□ -0.68
CAST-227ENST00000509602 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
CAST-227ENST00000509602 SLC16A10Q8TF71 515 aa10.79□□□□□ -0.68
CAST-227ENST00000509602 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
CAST-227ENST00000509602 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
CAST-227ENST00000509602 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
CAST-227ENST00000509602 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
CAST-227ENST00000509602 KDM4CQ9H3R0 1056 aa10.78□□□□□ -0.68
CAST-227ENST00000509602 MAGEB6P1A0A0J9YX57 407 aa10.77□□□□□ -0.69
CAST-227ENST00000509602 SKIV2LQ15477 1246 aaKnown RBP10.77□□□□□ -0.69
CAST-227ENST00000509602 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
CAST-227ENST00000509602 UPP2O95045 317 aa10.76□□□□□ -0.69
CAST-227ENST00000509602 NFX1Q12986 1120 aaKnown RBP10.76□□□□□ -0.69
CAST-227ENST00000509602 SH3D19Q5HYK7 790 aa10.76□□□□□ -0.69
CAST-227ENST00000509602 TIMP2P16035 220 aa10.75□□□□□ -0.69
CAST-227ENST00000509602 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
CAST-227ENST00000509602 ZIC2O95409 532 aaPredicted RBP10.74□□□□□ -0.69
CAST-227ENST00000509602 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
CAST-227ENST00000509602 ZFP42Q96MM3 310 aa10.74□□□□□ -0.69
CAST-227ENST00000509602 GPBP1L1Q9HC44 474 aaPredicted RBP10.74□□□□□ -0.69
CAST-227ENST00000509602 INSM1Q01101 510 aaPredicted RBP10.73□□□□□ -0.69
CAST-227ENST00000509602 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
CAST-227ENST00000509602 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
CAST-227ENST00000509602 NXF1Q9UBU9 619 aaKnown RBP10.73□□□□□ -0.69
CAST-227ENST00000509602 FSHRP23945 695 aa10.72□□□□□ -0.69
CAST-227ENST00000509602 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
CAST-227ENST00000509602 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
CAST-227ENST00000509602 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
CAST-227ENST00000509602 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
CAST-227ENST00000509602 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
CAST-227ENST00000509602 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 SH3RF1Q7Z6J0 888 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 NPAS3Q8IXF0 933 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
CAST-227ENST00000509602 ARHGAP9Q9BRR9 750 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 C1QTNF2Q9BXJ5 285 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 FAM117AQ9C073 453 aa10.7□□□□□ -0.7
CAST-227ENST00000509602 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
CAST-227ENST00000509602 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
CAST-227ENST00000509602 SLC10A4Q96EP9 437 aa10.69□□□□□ -0.7
CAST-227ENST00000509602 FKBPLQ9UIM3 349 aa10.69□□□□□ -0.7
CAST-227ENST00000509602 WIPF1O43516 503 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 AP1G2O75843 785 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 IRF7Q92985 503 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
CAST-227ENST00000509602 EMILIN1Q9Y6C2 1016 aa10.68□□□□□ -0.7
CAST-227ENST00000509602 NR3C2P08235 984 aa10.67□□□□□ -0.7
CAST-227ENST00000509602 GRM5P41594 1212 aa10.67□□□□□ -0.7
CAST-227ENST00000509602 C6orf118Q5T5N4 469 aa10.67□□□□□ -0.7
CAST-227ENST00000509602 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
CAST-227ENST00000509602 KLF16Q9BXK1 252 aaPredicted RBP10.67□□□□□ -0.7
CAST-227ENST00000509602 MAN1A2O60476 641 aa10.66□□□□□ -0.7
CAST-227ENST00000509602 BMP2P12643 396 aa10.66□□□□□ -0.7
CAST-227ENST00000509602 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
CAST-227ENST00000509602 CCDC116Q8IYX3 515 aa10.66□□□□□ -0.7
CAST-227ENST00000509602 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
CAST-227ENST00000509602 LRRN4Q8WUT4 740 aa10.66□□□□□ -0.7
CAST-227ENST00000509602 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms