RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 LHX8Q68G74 356 aa15.14■□□□□ 0.01
PTPN20-221ENST00000509599 PROM2Q8N271 834 aa15.14■□□□□ 0.01
PTPN20-221ENST00000509599 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
PTPN20-221ENST00000509599 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
PTPN20-221ENST00000509599 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
PTPN20-221ENST00000509599 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
PTPN20-221ENST00000509599 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
PTPN20-221ENST00000509599 DCBLD2Q96PD2 775 aa15.13■□□□□ 0.01
PTPN20-221ENST00000509599 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
PTPN20-221ENST00000509599 A0A0G2JS52 829 aa15.12■□□□□ 0.01
PTPN20-221ENST00000509599 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
PTPN20-221ENST00000509599 MYT1Q01538 1121 aa15.12■□□□□ 0.01
PTPN20-221ENST00000509599 NEXMIFQ5QGS0 1516 aa15.11■□□□□ 0.01
PTPN20-221ENST00000509599 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
PTPN20-221ENST00000509599 PRAG1Q86YV5 1406 aa15.1■□□□□ 0.01
PTPN20-221ENST00000509599 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
PTPN20-221ENST00000509599 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
PTPN20-221ENST00000509599 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
PTPN20-221ENST00000509599 UTRNP46939 3433 aa15.1■□□□□ 0.01
PTPN20-221ENST00000509599 SPON1Q9HCB6 807 aa15.08■□□□□ 0
PTPN20-221ENST00000509599 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
PTPN20-221ENST00000509599 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
PTPN20-221ENST00000509599 PHF12Q96QT6 1004 aa15.07■□□□□ 0
PTPN20-221ENST00000509599 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
PTPN20-221ENST00000509599 HFM1A2PYH4 1435 aa15.07■□□□□ 0
PTPN20-221ENST00000509599 KIF1AQ12756 1690 aa15.06■□□□□ 0
PTPN20-221ENST00000509599 KCNQ2O43526 872 aa15.06■□□□□ 0
PTPN20-221ENST00000509599 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
PTPN20-221ENST00000509599 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
PTPN20-221ENST00000509599 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
PTPN20-221ENST00000509599 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
PTPN20-221ENST00000509599 TRIM37O94972 964 aa15.04■□□□□ -0
PTPN20-221ENST00000509599 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
PTPN20-221ENST00000509599 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
PTPN20-221ENST00000509599 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
PTPN20-221ENST00000509599 FAM83GA6ND36 823 aa15.03■□□□□ -0
PTPN20-221ENST00000509599 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
PTPN20-221ENST00000509599 CASZ1Q86V15 1759 aa15.03■□□□□ -0
PTPN20-221ENST00000509599 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
PTPN20-221ENST00000509599 NUTM2FA1L443 756 aa15.02■□□□□ -0
PTPN20-221ENST00000509599 MYOM1P52179 1685 aa15.02□□□□□ -0.01
PTPN20-221ENST00000509599 KIF1BO60333 1816 aa15.01□□□□□ -0.01
PTPN20-221ENST00000509599 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
PTPN20-221ENST00000509599 APBA3O96018 575 aa15.01□□□□□ -0.01
PTPN20-221ENST00000509599 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
PTPN20-221ENST00000509599 NAIPQ13075 1403 aa15□□□□□ -0.01
PTPN20-221ENST00000509599 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
PTPN20-221ENST00000509599 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
PTPN20-221ENST00000509599 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
PTPN20-221ENST00000509599 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
PTPN20-221ENST00000509599 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
PTPN20-221ENST00000509599 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
PTPN20-221ENST00000509599 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
PTPN20-221ENST00000509599 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
PTPN20-221ENST00000509599 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
PTPN20-221ENST00000509599 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-221ENST00000509599 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
PTPN20-221ENST00000509599 NUP155O75694 1391 aa14.93□□□□□ -0.02
PTPN20-221ENST00000509599 PPLO60437 1756 aa14.93□□□□□ -0.02
PTPN20-221ENST00000509599 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
PTPN20-221ENST00000509599 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
PTPN20-221ENST00000509599 RGPD3A6NKT7 1758 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-221ENST00000509599 RGPD4Q7Z3J3 1758 aa14.92□□□□□ -0.02
PTPN20-221ENST00000509599 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
PTPN20-221ENST00000509599 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
PTPN20-221ENST00000509599 MIER1Q8N108 512 aa14.91□□□□□ -0.02
PTPN20-221ENST00000509599 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-221ENST00000509599 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-221ENST00000509599 PTGER2P43116 358 aa14.9□□□□□ -0.02
PTPN20-221ENST00000509599 PSME1Q06323 249 aa14.9□□□□□ -0.02
PTPN20-221ENST00000509599 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
PTPN20-221ENST00000509599 PDGFDQ9GZP0 370 aaPredicted RBP14.9□□□□□ -0.02
PTPN20-221ENST00000509599 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
PTPN20-221ENST00000509599 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
PTPN20-221ENST00000509599 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-221ENST00000509599 SYT17Q9BSW7 474 aa14.89□□□□□ -0.03
PTPN20-221ENST00000509599 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
PTPN20-221ENST00000509599 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PTPN20-221ENST00000509599 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
PTPN20-221ENST00000509599 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
PTPN20-221ENST00000509599 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
PTPN20-221ENST00000509599 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
PTPN20-221ENST00000509599 TECPR2O15040 1411 aa14.88□□□□□ -0.03
PTPN20-221ENST00000509599 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
PTPN20-221ENST00000509599 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
PTPN20-221ENST00000509599 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
PTPN20-221ENST00000509599 ZBTB7AO95365 584 aa14.86□□□□□ -0.03
PTPN20-221ENST00000509599 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
PTPN20-221ENST00000509599 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
PTPN20-221ENST00000509599 STK26Q9P289 416 aa14.83□□□□□ -0.04
PTPN20-221ENST00000509599 FKBP8Q14318 412 aa14.82□□□□□ -0.04
PTPN20-221ENST00000509599 PEAK1Q9H792 1746 aa14.82□□□□□ -0.04
PTPN20-221ENST00000509599 ROCK1Q13464 1354 aa14.82□□□□□ -0.04
PTPN20-221ENST00000509599 PDE3BQ13370 1112 aa14.81□□□□□ -0.04
PTPN20-221ENST00000509599 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
PTPN20-221ENST00000509599 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
PTPN20-221ENST00000509599 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
PTPN20-221ENST00000509599 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
PTPN20-221ENST00000509599 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
PTPN20-221ENST00000509599 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms