RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 NRAPQ86VF7 1730 aa21.1■□□□□ 0.97
HMGCL-208ENST00000509389 CRYBG1Q9Y4K1 1723 aa21.1■□□□□ 0.97
HMGCL-208ENST00000509389 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
HMGCL-208ENST00000509389 CDK19Q9BWU1 502 aa21.1■□□□□ 0.97
HMGCL-208ENST00000509389 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
HMGCL-208ENST00000509389 COL14A1Q05707 1796 aaKnown RBP21.09■□□□□ 0.97
HMGCL-208ENST00000509389 NBPF1Q3BBV0 1214 aa21.08■□□□□ 0.96
HMGCL-208ENST00000509389 BTG4Q9NY30 223 aa21.08■□□□□ 0.96
HMGCL-208ENST00000509389 BLMP54132 1417 aaPredicted RBP21.07■□□□□ 0.96
HMGCL-208ENST00000509389 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
HMGCL-208ENST00000509389 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
HMGCL-208ENST00000509389 KRT27Q7Z3Y8 459 aa21.04■□□□□ 0.96
HMGCL-208ENST00000509389 CCDC61Q9Y6R9 512 aa21.03■□□□□ 0.96
HMGCL-208ENST00000509389 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
HMGCL-208ENST00000509389 ACEP12821 1306 aa21.02■□□□□ 0.96
HMGCL-208ENST00000509389 FAM98CQ17RN3 349 aaKnown RBP21.02■□□□□ 0.96
HMGCL-208ENST00000509389 PLEKHG3A1L390 1219 aa21.01■□□□□ 0.95
HMGCL-208ENST00000509389 NBPF8Q3BBV2 869 aa21.01■□□□□ 0.95
HMGCL-208ENST00000509389 PRDM11Q9NQV5 511 aa21.01■□□□□ 0.95
HMGCL-208ENST00000509389 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
HMGCL-208ENST00000509389 A0A0G2JS52 829 aa21■□□□□ 0.95
HMGCL-208ENST00000509389 MYT1Q01538 1121 aa21■□□□□ 0.95
HMGCL-208ENST00000509389 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
HMGCL-208ENST00000509389 SPATA31A5Q5VU36 1347 aa21■□□□□ 0.95
HMGCL-208ENST00000509389 SPATA31A7Q8IWB4 1347 aa21■□□□□ 0.95
HMGCL-208ENST00000509389 NUTM2GQ5VZR2 741 aa20.99■□□□□ 0.95
HMGCL-208ENST00000509389 DEFB132Q7Z7B7 95 aa20.99■□□□□ 0.95
HMGCL-208ENST00000509389 KIAA0232Q92628 1395 aa20.99■□□□□ 0.95
HMGCL-208ENST00000509389 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
HMGCL-208ENST00000509389 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
HMGCL-208ENST00000509389 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
HMGCL-208ENST00000509389 L3MBTL2Q969R5 705 aa20.97■□□□□ 0.95
HMGCL-208ENST00000509389 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
HMGCL-208ENST00000509389 ZC3H6P61129 1189 aaKnown RBP20.96■□□□□ 0.95
HMGCL-208ENST00000509389 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
HMGCL-208ENST00000509389 QRICH2Q9H0J4 1663 aa20.95■□□□□ 0.94
HMGCL-208ENST00000509389 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
HMGCL-208ENST00000509389 THSD7AQ9UPZ6 1657 aa20.94■□□□□ 0.94
HMGCL-208ENST00000509389 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
HMGCL-208ENST00000509389 ABTB2Q8N961 1025 aa20.94■□□□□ 0.94
HMGCL-208ENST00000509389 SIN3AQ96ST3 1273 aa20.93■□□□□ 0.94
HMGCL-208ENST00000509389 SPATA31A1Q5TZJ5 1347 aa20.92■□□□□ 0.94
HMGCL-208ENST00000509389 SRCAPQ6ZRS2 3230 aa20.92■□□□□ 0.94
HMGCL-208ENST00000509389 NRKQ7Z2Y5 1582 aa20.92■□□□□ 0.94
HMGCL-208ENST00000509389 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
HMGCL-208ENST00000509389 STRN4Q9NRL3 753 aa20.91■□□□□ 0.94
HMGCL-208ENST00000509389 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
HMGCL-208ENST00000509389 USP19O94966 1318 aa20.9■□□□□ 0.94
HMGCL-208ENST00000509389 BAG6P46379 1132 aa20.88■□□□□ 0.93
HMGCL-208ENST00000509389 RGPD1P0DJD0 1748 aa20.88■□□□□ 0.93
HMGCL-208ENST00000509389 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 NLRP13Q86W25 1043 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 CABP1Q9NZU7 370 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 CAMTA1Q9Y6Y1 1673 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 CPDO75976 1380 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
HMGCL-208ENST00000509389 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
HMGCL-208ENST00000509389 EVA1CP58658 441 aa20.86■□□□□ 0.93
HMGCL-208ENST00000509389 BRD4O60885 1362 aaPredicted RBP20.86■□□□□ 0.93
HMGCL-208ENST00000509389 GCP02774 474 aa20.85■□□□□ 0.93
HMGCL-208ENST00000509389 USP6P35125 1406 aa20.85■□□□□ 0.93
HMGCL-208ENST00000509389 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
HMGCL-208ENST00000509389 LARP1Q6PKG0 1096 aaKnown RBP20.84■□□□□ 0.93
HMGCL-208ENST00000509389 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
HMGCL-208ENST00000509389 EN1Q05925 392 aaPredicted RBP20.83■□□□□ 0.92
HMGCL-208ENST00000509389 BARGINQ6ZT62 677 aa20.83■□□□□ 0.92
HMGCL-208ENST00000509389 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.92
HMGCL-208ENST00000509389 TNS1Q9HBL0 1735 aaKnown RBP20.82■□□□□ 0.92
HMGCL-208ENST00000509389 NLRP6P59044 892 aa20.81■□□□□ 0.92
HMGCL-208ENST00000509389 FAM196AQ6ZSG2 479 aa20.8■□□□□ 0.92
HMGCL-208ENST00000509389 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
HMGCL-208ENST00000509389 SLIT3O75094 1523 aa20.79■□□□□ 0.92
HMGCL-208ENST00000509389 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
HMGCL-208ENST00000509389 PIK3C2AO00443 1686 aa20.79■□□□□ 0.92
HMGCL-208ENST00000509389 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
HMGCL-208ENST00000509389 COL5A2P05997 1499 aaPredicted RBP20.78■□□□□ 0.92
HMGCL-208ENST00000509389 ZBTB7CA1YPR0 619 aa20.77■□□□□ 0.92
HMGCL-208ENST00000509389 TRIM37O94972 964 aa20.77■□□□□ 0.92
HMGCL-208ENST00000509389 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
HMGCL-208ENST00000509389 AKAP12Q02952 1782 aa20.77■□□□□ 0.92
HMGCL-208ENST00000509389 THRAP3Q9Y2W1 955 aaKnown RBP20.76■□□□□ 0.91
HMGCL-208ENST00000509389 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
HMGCL-208ENST00000509389 AATKQ6ZMQ8 1374 aa20.75■□□□□ 0.91
HMGCL-208ENST00000509389 EZH2Q15910 746 aaKnown RBP20.74■□□□□ 0.91
HMGCL-208ENST00000509389 LRP5O75197 1615 aa20.74■□□□□ 0.91
HMGCL-208ENST00000509389 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
HMGCL-208ENST00000509389 COL18A1P39060 1754 aa20.73■□□□□ 0.91
HMGCL-208ENST00000509389 CAMKK2Q96RR4 588 aa20.73■□□□□ 0.91
HMGCL-208ENST00000509389 CRB1P82279 1406 aa20.73■□□□□ 0.91
HMGCL-208ENST00000509389 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
HMGCL-208ENST00000509389 APBA3O96018 575 aa20.72■□□□□ 0.91
HMGCL-208ENST00000509389 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
HMGCL-208ENST00000509389 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
HMGCL-208ENST00000509389 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
HMGCL-208ENST00000509389 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
HMGCL-208ENST00000509389 TTC21AQ8NDW8 1320 aa20.69■□□□□ 0.9
HMGCL-208ENST00000509389 KTN1Q86UP2 1357 aaKnown RBP20.69■□□□□ 0.9
HMGCL-208ENST00000509389 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
HMGCL-208ENST00000509389 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
HMGCL-208ENST00000509389 RGPD5Q99666 1765 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms