RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 FAM174AQ8TBP5 190 aa7.3□□□□□ -1.24
XRCC4-204ENST00000509268 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
XRCC4-204ENST00000509268 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
XRCC4-204ENST00000509268 IRF6O14896 467 aa7.29□□□□□ -1.24
XRCC4-204ENST00000509268 FDX1P10109 184 aa7.29□□□□□ -1.24
XRCC4-204ENST00000509268 CDK15Q96Q40 435 aa7.29□□□□□ -1.24
XRCC4-204ENST00000509268 UPP2O95045 317 aa7.28□□□□□ -1.24
XRCC4-204ENST00000509268 DESI1Q6ICB0 168 aa7.27□□□□□ -1.25
XRCC4-204ENST00000509268 DNMT3AQ9Y6K1 912 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-204ENST00000509268 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-204ENST00000509268 ZIC2O95409 532 aaPredicted RBP7.26□□□□□ -1.25
XRCC4-204ENST00000509268 CLCN1P35523 988 aa7.26□□□□□ -1.25
XRCC4-204ENST00000509268 FOXK2Q01167 660 aa7.26□□□□□ -1.25
XRCC4-204ENST00000509268 NR5A1Q13285 461 aa7.26□□□□□ -1.25
XRCC4-204ENST00000509268 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
XRCC4-204ENST00000509268 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
XRCC4-204ENST00000509268 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 PCDHGC3Q9UN70 934 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 SPDYE5A6NIY4 337 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 SPTLC1O15269 473 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
XRCC4-204ENST00000509268 BMP2P12643 396 aa7.24□□□□□ -1.25
XRCC4-204ENST00000509268 KRT76Q01546 638 aa7.24□□□□□ -1.25
XRCC4-204ENST00000509268 KANK3Q6NY19 840 aa7.24□□□□□ -1.25
XRCC4-204ENST00000509268 ZFAND3Q9H8U3 227 aa7.24□□□□□ -1.25
XRCC4-204ENST00000509268 SOS2Q07890 1332 aaPredicted RBP7.24□□□□□ -1.25
XRCC4-204ENST00000509268 GPR161Q8N6U8 529 aaKnown RBP7.23□□□□□ -1.25
XRCC4-204ENST00000509268 NANOS1Q8WY41 292 aaKnown RBP7.23□□□□□ -1.25
XRCC4-204ENST00000509268 ITPKCQ96DU7 683 aa7.23□□□□□ -1.25
XRCC4-204ENST00000509268 GPAT2Q6NUI2 795 aa7.22□□□□□ -1.25
XRCC4-204ENST00000509268 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
XRCC4-204ENST00000509268 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.21□□□□□ -1.25
XRCC4-204ENST00000509268 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.25
XRCC4-204ENST00000509268 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.25
XRCC4-204ENST00000509268 MEIOBQ8N635 442 aa7.21□□□□□ -1.25
XRCC4-204ENST00000509268 ARID5BQ14865 1188 aa7.2□□□□□ -1.26
XRCC4-204ENST00000509268 DNMT3LQ9UJW3 386 aa7.2□□□□□ -1.26
XRCC4-204ENST00000509268 IRS1P35568 1242 aa7.2□□□□□ -1.26
XRCC4-204ENST00000509268 SVOPQ8N4V2 548 aa7.2□□□□□ -1.26
XRCC4-204ENST00000509268 KRI1Q8N9T8 703 aaKnown RBP7.2□□□□□ -1.26
XRCC4-204ENST00000509268 TSEN34Q9BSV6 310 aaKnown RBP7.2□□□□□ -1.26
XRCC4-204ENST00000509268 COL25A1Q9BXS0 654 aaPredicted RBP7.2□□□□□ -1.26
XRCC4-204ENST00000509268 SLURP2P0DP57 97 aa7.19□□□□□ -1.26
XRCC4-204ENST00000509268 GRM5P41594 1212 aa7.19□□□□□ -1.26
XRCC4-204ENST00000509268 MARSP56192 900 aaKnown RBP7.19□□□□□ -1.26
XRCC4-204ENST00000509268 MTMR2Q13614 643 aa7.19□□□□□ -1.26
XRCC4-204ENST00000509268 LYPD8Q6UX82 237 aa7.19□□□□□ -1.26
XRCC4-204ENST00000509268 SCARF2Q96GP6 870 aaPredicted RBP7.19□□□□□ -1.26
XRCC4-204ENST00000509268 RTN4Q9NQC3 1192 aaKnown RBP7.19□□□□□ -1.26
XRCC4-204ENST00000509268 ARHGEF15O94989 841 aa7.18□□□□□ -1.26
XRCC4-204ENST00000509268 NR3C2P08235 984 aa7.18□□□□□ -1.26
XRCC4-204ENST00000509268 CTHP32929 405 aa7.18□□□□□ -1.26
XRCC4-204ENST00000509268 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
XRCC4-204ENST00000509268 FOXJ1Q92949 421 aa7.17□□□□□ -1.26
XRCC4-204ENST00000509268 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
XRCC4-204ENST00000509268 PTSQ03393 145 aa7.16□□□□□ -1.26
XRCC4-204ENST00000509268 GJA5P36382 358 aa7.16□□□□□ -1.26
XRCC4-204ENST00000509268 XP32Q5T750 250 aa7.16□□□□□ -1.26
XRCC4-204ENST00000509268 BPHLQ86WA6 291 aaPredicted RBP7.16□□□□□ -1.26
XRCC4-204ENST00000509268 TTLL8A6PVC2 850 aa7.15□□□□□ -1.27
XRCC4-204ENST00000509268 NDUFV2P19404 249 aa7.15□□□□□ -1.27
XRCC4-204ENST00000509268 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
XRCC4-204ENST00000509268 TULP1O00294 542 aaPredicted RBP7.14□□□□□ -1.27
XRCC4-204ENST00000509268 SSTR3P32745 418 aaPredicted RBP7.14□□□□□ -1.27
XRCC4-204ENST00000509268 AGERQ15109 404 aa7.14□□□□□ -1.27
XRCC4-204ENST00000509268 CCDC155Q8N6L0 562 aa7.14□□□□□ -1.27
XRCC4-204ENST00000509268 EMILIN1Q9Y6C2 1016 aa7.14□□□□□ -1.27
XRCC4-204ENST00000509268 RNFT1Q5M7Z0 435 aa7.13□□□□□ -1.27
XRCC4-204ENST00000509268 WHAMMQ8TF30 809 aa7.13□□□□□ -1.27
XRCC4-204ENST00000509268 MAP4K5Q9Y4K4 846 aa7.13□□□□□ -1.27
XRCC4-204ENST00000509268 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
XRCC4-204ENST00000509268 SV2AQ7L0J3 742 aa7.12□□□□□ -1.27
XRCC4-204ENST00000509268 SLC35F4A4IF30 521 aa7.12□□□□□ -1.27
XRCC4-204ENST00000509268 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
XRCC4-204ENST00000509268 ARMC2Q8NEN0 867 aa7.11□□□□□ -1.27
XRCC4-204ENST00000509268 C1QTNF2Q9BXJ5 285 aa7.11□□□□□ -1.27
XRCC4-204ENST00000509268 MSTNO14793 375 aa7.1□□□□□ -1.27
XRCC4-204ENST00000509268 ADAM23O75077 832 aa7.1□□□□□ -1.27
XRCC4-204ENST00000509268 DIXDC1Q155Q3 683 aa7.1□□□□□ -1.27
XRCC4-204ENST00000509268 VWA5B2Q8N398 1253 aa7.1□□□□□ -1.27
XRCC4-204ENST00000509268 ITGA6P23229 1130 aa7.09□□□□□ -1.27
XRCC4-204ENST00000509268 TRMT44Q8IYL2 757 aaKnown RBP7.09□□□□□ -1.27
XRCC4-204ENST00000509268 MAP10Q9P2G4 905 aa7.09□□□□□ -1.27
XRCC4-204ENST00000509268 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 SPINT1O43278 529 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 MAP3K10Q02779 954 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 VASH1Q7L8A9 365 aaPredicted RBP7.08□□□□□ -1.28
XRCC4-204ENST00000509268 CCDC116Q8IYX3 515 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 ENAMQ9NRM1 1142 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 FSHRP23945 695 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 Q6ZVU0 165 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
XRCC4-204ENST00000509268 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
XRCC4-204ENST00000509268 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
XRCC4-204ENST00000509268 SH3RF1Q7Z6J0 888 aa7.07□□□□□ -1.28
XRCC4-204ENST00000509268 PHF20L1A8MW92 1017 aa7.06□□□□□ -1.28
XRCC4-204ENST00000509268 ADAMTS2O95450 1211 aa7.06□□□□□ -1.28
XRCC4-204ENST00000509268 LYPD4Q6UWN0 246 aa7.06□□□□□ -1.28
XRCC4-204ENST00000509268 ZBTB3Q9H5J0 574 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms