RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 QRICH2Q9H0J4 1663 aa15.87■□□□□ 0.13
RNF4-212ENST00000509258 BRWD3Q6RI45 1802 aa15.87■□□□□ 0.13
RNF4-212ENST00000509258 WASLO00401 505 aaPredicted RBP15.86■□□□□ 0.13
RNF4-212ENST00000509258 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
RNF4-212ENST00000509258 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
RNF4-212ENST00000509258 NRAPQ86VF7 1730 aa15.85■□□□□ 0.13
RNF4-212ENST00000509258 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
RNF4-212ENST00000509258 KRT27Q7Z3Y8 459 aa15.84■□□□□ 0.13
RNF4-212ENST00000509258 L3MBTL2Q969R5 705 aa15.84■□□□□ 0.13
RNF4-212ENST00000509258 COL14A1Q05707 1796 aaKnown RBP15.84■□□□□ 0.13
RNF4-212ENST00000509258 A0A0G2JS52 829 aa15.83■□□□□ 0.12
RNF4-212ENST00000509258 MYT1Q01538 1121 aa15.83■□□□□ 0.12
RNF4-212ENST00000509258 NGDNQ8NEJ9 315 aaKnown RBP15.82■□□□□ 0.12
RNF4-212ENST00000509258 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
RNF4-212ENST00000509258 DEFB132Q7Z7B7 95 aa15.81■□□□□ 0.12
RNF4-212ENST00000509258 PHRF1Q9P1Y6 1649 aaKnown RBP15.81■□□□□ 0.12
RNF4-212ENST00000509258 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
RNF4-212ENST00000509258 CDK19Q9BWU1 502 aa15.8■□□□□ 0.12
RNF4-212ENST00000509258 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
RNF4-212ENST00000509258 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
RNF4-212ENST00000509258 FAM98CQ17RN3 349 aaKnown RBP15.79■□□□□ 0.12
RNF4-212ENST00000509258 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
RNF4-212ENST00000509258 SPATA31A5Q5VU36 1347 aa15.77■□□□□ 0.12
RNF4-212ENST00000509258 SPATA31A7Q8IWB4 1347 aa15.77■□□□□ 0.12
RNF4-212ENST00000509258 BAG6P46379 1132 aa15.76■□□□□ 0.11
RNF4-212ENST00000509258 NBPF8Q3BBV2 869 aa15.76■□□□□ 0.11
RNF4-212ENST00000509258 THSD7AQ9UPZ6 1657 aa15.76■□□□□ 0.11
RNF4-212ENST00000509258 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
RNF4-212ENST00000509258 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
RNF4-212ENST00000509258 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
RNF4-212ENST00000509258 ACEP12821 1306 aa15.73■□□□□ 0.11
RNF4-212ENST00000509258 LRP5O75197 1615 aa15.73■□□□□ 0.11
RNF4-212ENST00000509258 RGPD1P0DJD0 1748 aa15.73■□□□□ 0.11
RNF4-212ENST00000509258 AKAP12Q02952 1782 aa15.72■□□□□ 0.11
RNF4-212ENST00000509258 NRKQ7Z2Y5 1582 aa15.72■□□□□ 0.11
RNF4-212ENST00000509258 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
RNF4-212ENST00000509258 DISP2A7MBM2 1401 aa15.71■□□□□ 0.11
RNF4-212ENST00000509258 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
RNF4-212ENST00000509258 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
RNF4-212ENST00000509258 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
RNF4-212ENST00000509258 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
RNF4-212ENST00000509258 PLEKHG3A1L390 1219 aa15.7■□□□□ 0.1
RNF4-212ENST00000509258 CHRNA2Q15822 529 aa15.69■□□□□ 0.1
RNF4-212ENST00000509258 STRN4Q9NRL3 753 aa15.69■□□□□ 0.1
RNF4-212ENST00000509258 PIK3C2AO00443 1686 aa15.69■□□□□ 0.1
RNF4-212ENST00000509258 ROCK2O75116 1388 aaKnown RBP15.68■□□□□ 0.1
RNF4-212ENST00000509258 ZC3H6P61129 1189 aaKnown RBP15.68■□□□□ 0.1
RNF4-212ENST00000509258 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
RNF4-212ENST00000509258 TNS1Q9HBL0 1735 aaKnown RBP15.68■□□□□ 0.1
RNF4-212ENST00000509258 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
RNF4-212ENST00000509258 LMO7Q8WWI1 1683 aa15.67■□□□□ 0.1
RNF4-212ENST00000509258 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
RNF4-212ENST00000509258 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
RNF4-212ENST00000509258 EN1Q05925 392 aaPredicted RBP15.67■□□□□ 0.1
RNF4-212ENST00000509258 CPDO75976 1380 aa15.66■□□□□ 0.1
RNF4-212ENST00000509258 ABTB2Q8N961 1025 aa15.66■□□□□ 0.1
RNF4-212ENST00000509258 USP19O94966 1318 aa15.66■□□□□ 0.1
RNF4-212ENST00000509258 RGPD5Q99666 1765 aa15.65■□□□□ 0.1
RNF4-212ENST00000509258 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
RNF4-212ENST00000509258 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
RNF4-212ENST00000509258 CAMTA1Q9Y6Y1 1673 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 USP6P35125 1406 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 EVA1CP58658 441 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 TRIM26Q12899 539 aaPredicted RBP15.64■□□□□ 0.09
RNF4-212ENST00000509258 BARGINQ6ZT62 677 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 MON2Q7Z3U7 1717 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 CABP1Q9NZU7 370 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
RNF4-212ENST00000509258 PARD3Q8TEW0 1356 aa15.63■□□□□ 0.09
RNF4-212ENST00000509258 COL18A1P39060 1754 aa15.63■□□□□ 0.09
RNF4-212ENST00000509258 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
RNF4-212ENST00000509258 TRIM37O94972 964 aa15.61■□□□□ 0.09
RNF4-212ENST00000509258 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
RNF4-212ENST00000509258 R3HDM1Q15032 1099 aaKnown RBP15.61■□□□□ 0.09
RNF4-212ENST00000509258 LARP1Q6PKG0 1096 aaKnown RBP15.61■□□□□ 0.09
RNF4-212ENST00000509258 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
RNF4-212ENST00000509258 SLIT3O75094 1523 aa15.61■□□□□ 0.09
RNF4-212ENST00000509258 COL5A2P05997 1499 aaPredicted RBP15.6■□□□□ 0.09
RNF4-212ENST00000509258 GCP02774 474 aa15.6■□□□□ 0.09
RNF4-212ENST00000509258 EZH2Q15910 746 aaKnown RBP15.6■□□□□ 0.09
RNF4-212ENST00000509258 THRAP3Q9Y2W1 955 aaKnown RBP15.6■□□□□ 0.09
RNF4-212ENST00000509258 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
RNF4-212ENST00000509258 CAMKK2Q96RR4 588 aa15.59■□□□□ 0.09
RNF4-212ENST00000509258 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
RNF4-212ENST00000509258 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
RNF4-212ENST00000509258 APBA3O96018 575 aa15.58■□□□□ 0.08
RNF4-212ENST00000509258 CRB1P82279 1406 aa15.58■□□□□ 0.08
RNF4-212ENST00000509258 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
RNF4-212ENST00000509258 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
RNF4-212ENST00000509258 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
RNF4-212ENST00000509258 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
RNF4-212ENST00000509258 PARP4Q9UKK3 1724 aaKnown RBP15.57■□□□□ 0.08
RNF4-212ENST00000509258 C11orf95C9JLR9 678 aaPredicted RBP15.56■□□□□ 0.08
RNF4-212ENST00000509258 CARD11Q9BXL7 1154 aa15.56■□□□□ 0.08
RNF4-212ENST00000509258 RREB1Q92766 1687 aa15.56■□□□□ 0.08
RNF4-212ENST00000509258 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
RNF4-212ENST00000509258 NLRP6P59044 892 aa15.55■□□□□ 0.08
RNF4-212ENST00000509258 NFAT5O94916 1531 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 OVOS2A0A0G2JMS6 1433 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 OVOS2A0A0J9YW53 1432 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms