RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 AKAP12Q02952 1782 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 CT47B1P0C2W7 299 aaPredicted RBP12.06□□□□□ -0.48
HTT-205ENST00000509043 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
HTT-205ENST00000509043 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
HTT-205ENST00000509043 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 TOPAZ1Q8N9V7 1692 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
HTT-205ENST00000509043 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
HTT-205ENST00000509043 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
HTT-205ENST00000509043 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
HTT-205ENST00000509043 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
HTT-205ENST00000509043 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
HTT-205ENST00000509043 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
HTT-205ENST00000509043 FCHSD2O94868 740 aa12.04□□□□□ -0.48
HTT-205ENST00000509043 AAMPQ13685 434 aa12.04□□□□□ -0.48
HTT-205ENST00000509043 IL16Q14005 1332 aa12.04□□□□□ -0.48
HTT-205ENST00000509043 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
HTT-205ENST00000509043 NEFMP07197 916 aa12.03□□□□□ -0.48
HTT-205ENST00000509043 COG3Q96JB2 828 aa12.03□□□□□ -0.48
HTT-205ENST00000509043 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
HTT-205ENST00000509043 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
HTT-205ENST00000509043 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
HTT-205ENST00000509043 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
HTT-205ENST00000509043 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.49
HTT-205ENST00000509043 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.49
HTT-205ENST00000509043 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.49
HTT-205ENST00000509043 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
HTT-205ENST00000509043 ADAMTSL3P82987 1691 aa12.01□□□□□ -0.49
HTT-205ENST00000509043 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
HTT-205ENST00000509043 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
HTT-205ENST00000509043 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
HTT-205ENST00000509043 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
HTT-205ENST00000509043 U2SURPO15042 1029 aaKnown RBP12□□□□□ -0.49
HTT-205ENST00000509043 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
HTT-205ENST00000509043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.49
HTT-205ENST00000509043 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
HTT-205ENST00000509043 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
HTT-205ENST00000509043 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
HTT-205ENST00000509043 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
HTT-205ENST00000509043 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
HTT-205ENST00000509043 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
HTT-205ENST00000509043 USP6P35125 1406 aa11.99□□□□□ -0.49
HTT-205ENST00000509043 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
HTT-205ENST00000509043 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
HTT-205ENST00000509043 MS4A1P11836 297 aa11.98□□□□□ -0.49
HTT-205ENST00000509043 CRBNQ96SW2 442 aa11.98□□□□□ -0.49
HTT-205ENST00000509043 LRRC7Q96NW7 1537 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 ACEP12821 1306 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 FANCIQ9NVI1 1328 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 NME9Q86XW9 330 aa11.97□□□□□ -0.49
HTT-205ENST00000509043 PLIN1O60240 522 aa11.96□□□□□ -0.49
HTT-205ENST00000509043 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
HTT-205ENST00000509043 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
HTT-205ENST00000509043 ZNF428Q96B54 188 aa11.96□□□□□ -0.49
HTT-205ENST00000509043 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.5
HTT-205ENST00000509043 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
HTT-205ENST00000509043 IL13P35225 146 aa11.95□□□□□ -0.5
HTT-205ENST00000509043 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
HTT-205ENST00000509043 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
HTT-205ENST00000509043 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
HTT-205ENST00000509043 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
HTT-205ENST00000509043 MAP2P11137 1827 aaKnown RBP11.95□□□□□ -0.5
HTT-205ENST00000509043 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
HTT-205ENST00000509043 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
HTT-205ENST00000509043 RIPK4P57078 832 aa11.94□□□□□ -0.5
HTT-205ENST00000509043 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
HTT-205ENST00000509043 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
HTT-205ENST00000509043 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
HTT-205ENST00000509043 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
HTT-205ENST00000509043 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
HTT-205ENST00000509043 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
HTT-205ENST00000509043 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
HTT-205ENST00000509043 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
HTT-205ENST00000509043 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
HTT-205ENST00000509043 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
HTT-205ENST00000509043 BCAR3O75815 825 aa11.91□□□□□ -0.5
HTT-205ENST00000509043 KCNA6P17658 529 aa11.91□□□□□ -0.5
HTT-205ENST00000509043 C20orf194Q5TEA3 1177 aa11.91□□□□□ -0.5
HTT-205ENST00000509043 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
HTT-205ENST00000509043 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
HTT-205ENST00000509043 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
HTT-205ENST00000509043 NGDNQ8NEJ9 315 aaKnown RBP11.9□□□□□ -0.5
HTT-205ENST00000509043 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
HTT-205ENST00000509043 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
HTT-205ENST00000509043 GNAI1P63096 354 aa11.89□□□□□ -0.51
HTT-205ENST00000509043 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
HTT-205ENST00000509043 SBNO1A3KN83 1393 aa11.89□□□□□ -0.51
HTT-205ENST00000509043 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
HTT-205ENST00000509043 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
HTT-205ENST00000509043 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
HTT-205ENST00000509043 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
HTT-205ENST00000509043 ZKSCAN2Q63HK3 967 aa11.88□□□□□ -0.51
HTT-205ENST00000509043 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
HTT-205ENST00000509043 FLT4P35916 1363 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms