RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 KCNH2Q12809 1159 aa6.47□□□□□ -1.37
DEPDC1B-204ENST00000509006 SCARF1Q14162 830 aa6.47□□□□□ -1.37
DEPDC1B-204ENST00000509006 VSIG10Q8N0Z9 540 aa6.46□□□□□ -1.38
DEPDC1B-204ENST00000509006 PRR7Q8TB68 274 aa6.46□□□□□ -1.38
DEPDC1B-204ENST00000509006 SPIRE2Q8WWL2 714 aa6.46□□□□□ -1.38
DEPDC1B-204ENST00000509006 KLF16Q9BXK1 252 aaPredicted RBP6.46□□□□□ -1.38
DEPDC1B-204ENST00000509006 MOXD2PA6NHM9 499 aa6.45□□□□□ -1.38
DEPDC1B-204ENST00000509006 MPNDQ8N594 471 aa6.45□□□□□ -1.38
DEPDC1B-204ENST00000509006 KRI1Q8N9T8 703 aaKnown RBP6.45□□□□□ -1.38
DEPDC1B-204ENST00000509006 C6orf118Q5T5N4 469 aa6.44□□□□□ -1.38
DEPDC1B-204ENST00000509006 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
DEPDC1B-204ENST00000509006 MTMR2Q13614 643 aa6.43□□□□□ -1.38
DEPDC1B-204ENST00000509006 ITPKCQ96DU7 683 aa6.43□□□□□ -1.38
DEPDC1B-204ENST00000509006 MAN1A2O60476 641 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 ZIC2O95409 532 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 NR3C2P08235 984 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 SSTR3P32745 418 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 CTHP32929 405 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 GSK3AP49840 483 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 KCTD17Q8N5Z5 321 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 FAM174AQ8TBP5 190 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 FOXJ1Q92949 421 aa6.42□□□□□ -1.38
DEPDC1B-204ENST00000509006 TULP1O00294 542 aaPredicted RBP6.41□□□□□ -1.38
DEPDC1B-204ENST00000509006 PPFIA3O75145 1194 aa6.41□□□□□ -1.38
DEPDC1B-204ENST00000509006 DESI1Q6ICB0 168 aa6.41□□□□□ -1.38
DEPDC1B-204ENST00000509006 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
DEPDC1B-204ENST00000509006 MAP10Q9P2G4 905 aa6.4□□□□□ -1.38
DEPDC1B-204ENST00000509006 SPDYE5A6NIY4 337 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 BMP2P12643 396 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 KCNMA1Q12791 1236 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 TTLL12Q14166 644 aaPredicted RBP6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
DEPDC1B-204ENST00000509006 F12P00748 615 aaPredicted RBP6.38□□□□□ -1.39
DEPDC1B-204ENST00000509006 KRT76Q01546 638 aa6.38□□□□□ -1.39
DEPDC1B-204ENST00000509006 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
DEPDC1B-204ENST00000509006 DNMT3LQ9UJW3 386 aa6.38□□□□□ -1.39
DEPDC1B-204ENST00000509006 GRM5P41594 1212 aa6.37□□□□□ -1.39
DEPDC1B-204ENST00000509006 NR5A1Q13285 461 aa6.37□□□□□ -1.39
DEPDC1B-204ENST00000509006 MEIOBQ8N635 442 aa6.37□□□□□ -1.39
DEPDC1B-204ENST00000509006 AGERQ15109 404 aa6.36□□□□□ -1.39
DEPDC1B-204ENST00000509006 RSBN1LQ6PCB5 846 aaPredicted RBP6.36□□□□□ -1.39
DEPDC1B-204ENST00000509006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.36□□□□□ -1.39
DEPDC1B-204ENST00000509006 PCDHB15Q9Y5E8 787 aa6.36□□□□□ -1.39
DEPDC1B-204ENST00000509006 SOS2Q07890 1332 aaPredicted RBP6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 UPP2O95045 317 aa6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 FSHRP23945 695 aa6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 GIGYF2Q6Y7W6 1299 aaKnown RBP6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 GPR161Q8N6U8 529 aaKnown RBP6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 BEGAINQ9BUH8 593 aa6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 TBC1D2Q9BYX2 928 aa6.35□□□□□ -1.39
DEPDC1B-204ENST00000509006 GDF11O95390 407 aa6.34□□□□□ -1.39
DEPDC1B-204ENST00000509006 RASSF7Q02833 373 aa6.34□□□□□ -1.39
DEPDC1B-204ENST00000509006 TMEM151AQ8N4L1 468 aa6.34□□□□□ -1.39
DEPDC1B-204ENST00000509006 CNTNAP3BQ96NU0 1288 aa6.34□□□□□ -1.39
DEPDC1B-204ENST00000509006 CNTNAP3Q9BZ76 1288 aa6.34□□□□□ -1.39
DEPDC1B-204ENST00000509006 PER1O15534 1290 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-204ENST00000509006 HRCP23327 699 aa6.33□□□□□ -1.4
DEPDC1B-204ENST00000509006 AMHR2Q16671 573 aa6.33□□□□□ -1.4
DEPDC1B-204ENST00000509006 BPHLQ86WA6 291 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-204ENST00000509006 CABLES1Q8TDN4 633 aa6.33□□□□□ -1.4
DEPDC1B-204ENST00000509006 SPTLC1O15269 473 aa6.32□□□□□ -1.4
DEPDC1B-204ENST00000509006 ZBTB3Q9H5J0 574 aa6.32□□□□□ -1.4
DEPDC1B-204ENST00000509006 ADAMTS8Q9UP79 889 aa6.32□□□□□ -1.4
DEPDC1B-204ENST00000509006 GJA5P36382 358 aa6.31□□□□□ -1.4
DEPDC1B-204ENST00000509006 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
DEPDC1B-204ENST00000509006 C1QTNF2Q9BXJ5 285 aa6.31□□□□□ -1.4
DEPDC1B-204ENST00000509006 COL25A1Q9BXS0 654 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-204ENST00000509006 TTLL8A6PVC2 850 aa6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 PTSQ03393 145 aa6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 RNFT1Q5M7Z0 435 aa6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 ZNF385CQ66K41 422 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 TSC1Q92574 1164 aa6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-204ENST00000509006 FIGNL2A6NMB9 653 aa6.29□□□□□ -1.4
DEPDC1B-204ENST00000509006 BARGINQ6ZT62 677 aa6.29□□□□□ -1.4
DEPDC1B-204ENST00000509006 VASH1Q7L8A9 365 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1B-204ENST00000509006 SH3RF1Q7Z6J0 888 aa6.29□□□□□ -1.4
DEPDC1B-204ENST00000509006 SVOPQ8N4V2 548 aa6.29□□□□□ -1.4
DEPDC1B-204ENST00000509006 MAGEB6P1A0A0J9YX57 407 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 ZMYND10O75800 440 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 CBLBQ13191 982 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 PARP9Q8IXQ6 854 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 CCDC116Q8IYX3 515 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 WHAMMQ8TF30 809 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 MAP4K5Q9Y4K4 846 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 EMILIN1Q9Y6C2 1016 aa6.28□□□□□ -1.4
DEPDC1B-204ENST00000509006 DIXDC1Q155Q3 683 aa6.27□□□□□ -1.41
DEPDC1B-204ENST00000509006 PRPF38BQ5VTL8 546 aaKnown RBP6.27□□□□□ -1.41
DEPDC1B-204ENST00000509006 SH3BP5LQ7L8J4 393 aa6.27□□□□□ -1.41
DEPDC1B-204ENST00000509006 RIC3Q7Z5B4 369 aa6.27□□□□□ -1.41
DEPDC1B-204ENST00000509006 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
DEPDC1B-204ENST00000509006 QPCTQ16769 361 aa6.26□□□□□ -1.41
DEPDC1B-204ENST00000509006 NBPF14Q5TI25 921 aa6.26□□□□□ -1.41
DEPDC1B-204ENST00000509006 GPAT2Q6NUI2 795 aa6.26□□□□□ -1.41
DEPDC1B-204ENST00000509006 TRMT44Q8IYL2 757 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms