RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 SLIT2O94813 1529 aa14.48□□□□□ -0.09
UBE2D3-227ENST00000508818 FAM83GA6ND36 823 aa14.48□□□□□ -0.09
UBE2D3-227ENST00000508818 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
UBE2D3-227ENST00000508818 VPS72Q15906 364 aa14.48□□□□□ -0.09
UBE2D3-227ENST00000508818 CENPJQ9HC77 1338 aaPredicted RBP14.47□□□□□ -0.09
UBE2D3-227ENST00000508818 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
UBE2D3-227ENST00000508818 A0A0G2JS52 829 aa14.47□□□□□ -0.09
UBE2D3-227ENST00000508818 MYT1Q01538 1121 aa14.47□□□□□ -0.09
UBE2D3-227ENST00000508818 KIAA1210Q9ULL0 1709 aa14.46□□□□□ -0.09
UBE2D3-227ENST00000508818 RALGAPBQ86X10 1494 aa14.46□□□□□ -0.09
UBE2D3-227ENST00000508818 CCDC125Q86Z20 511 aa14.46□□□□□ -0.09
UBE2D3-227ENST00000508818 BTG4Q9NY30 223 aa14.46□□□□□ -0.09
UBE2D3-227ENST00000508818 ACEP12821 1306 aa14.45□□□□□ -0.1
UBE2D3-227ENST00000508818 NBPF8Q3BBV2 869 aa14.45□□□□□ -0.1
UBE2D3-227ENST00000508818 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
UBE2D3-227ENST00000508818 PRDM11Q9NQV5 511 aa14.45□□□□□ -0.1
UBE2D3-227ENST00000508818 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
UBE2D3-227ENST00000508818 KCNA4P22459 653 aa14.44□□□□□ -0.1
UBE2D3-227ENST00000508818 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
UBE2D3-227ENST00000508818 ATP7BP35670 1465 aa14.44□□□□□ -0.1
UBE2D3-227ENST00000508818 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.44□□□□□ -0.1
UBE2D3-227ENST00000508818 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
UBE2D3-227ENST00000508818 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
UBE2D3-227ENST00000508818 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
UBE2D3-227ENST00000508818 TRPM3Q9HCF6 1732 aaPredicted RBP14.42□□□□□ -0.1
UBE2D3-227ENST00000508818 SF3B2Q13435 895 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-227ENST00000508818 ALS2Q96Q42 1657 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 GLI3P10071 1580 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 POLR3AO14802 1390 aaPredicted RBP14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 ONECUT3O60422 494 aaPredicted RBP14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 EVA1CP58658 441 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 ZC3H6P61129 1189 aaKnown RBP14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 KRT27Q7Z3Y8 459 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 EVC2Q86UK5 1308 aa14.4□□□□□ -0.1
UBE2D3-227ENST00000508818 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 ABCA3Q99758 1704 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 NLRP13Q86W25 1043 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 PPIP5K1Q6PFW1 1433 aa14.39□□□□□ -0.11
UBE2D3-227ENST00000508818 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
UBE2D3-227ENST00000508818 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
UBE2D3-227ENST00000508818 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
UBE2D3-227ENST00000508818 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-227ENST00000508818 SPATA31A5Q5VU36 1347 aa14.36□□□□□ -0.11
UBE2D3-227ENST00000508818 SPATA31A7Q8IWB4 1347 aa14.36□□□□□ -0.11
UBE2D3-227ENST00000508818 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-227ENST00000508818 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
UBE2D3-227ENST00000508818 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 QRICH2Q9H0J4 1663 aa14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 NLRP6P59044 892 aa14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 TRIM26Q12899 539 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 CARD11Q9BXL7 1154 aa14.34□□□□□ -0.11
UBE2D3-227ENST00000508818 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.11
UBE2D3-227ENST00000508818 GCP02774 474 aa14.33□□□□□ -0.12
UBE2D3-227ENST00000508818 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-227ENST00000508818 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
UBE2D3-227ENST00000508818 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
UBE2D3-227ENST00000508818 DEFB132Q7Z7B7 95 aa14.32□□□□□ -0.12
UBE2D3-227ENST00000508818 TRPM1Q7Z4N2 1603 aa14.32□□□□□ -0.12
UBE2D3-227ENST00000508818 BAG6P46379 1132 aa14.31□□□□□ -0.12
UBE2D3-227ENST00000508818 NRAPQ86VF7 1730 aa14.31□□□□□ -0.12
UBE2D3-227ENST00000508818 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
UBE2D3-227ENST00000508818 USP19O94966 1318 aa14.3□□□□□ -0.12
UBE2D3-227ENST00000508818 USP6P35125 1406 aa14.3□□□□□ -0.12
UBE2D3-227ENST00000508818 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
UBE2D3-227ENST00000508818 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
UBE2D3-227ENST00000508818 CPDO75976 1380 aa14.29□□□□□ -0.12
UBE2D3-227ENST00000508818 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-227ENST00000508818 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
UBE2D3-227ENST00000508818 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
UBE2D3-227ENST00000508818 TMC1Q8TDI8 760 aa14.28□□□□□ -0.12
UBE2D3-227ENST00000508818 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.12
UBE2D3-227ENST00000508818 FAM196AQ6ZSG2 479 aa14.27□□□□□ -0.13
UBE2D3-227ENST00000508818 TCP11L2Q8N4U5 519 aa14.27□□□□□ -0.13
UBE2D3-227ENST00000508818 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
UBE2D3-227ENST00000508818 SOX12O15370 315 aa14.26□□□□□ -0.13
UBE2D3-227ENST00000508818 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
UBE2D3-227ENST00000508818 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
UBE2D3-227ENST00000508818 KTN1Q86UP2 1357 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-227ENST00000508818 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
UBE2D3-227ENST00000508818 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-227ENST00000508818 NRKQ7Z2Y5 1582 aa14.25□□□□□ -0.13
UBE2D3-227ENST00000508818 CAMTA1Q9Y6Y1 1673 aa14.24□□□□□ -0.13
UBE2D3-227ENST00000508818 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
UBE2D3-227ENST00000508818 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-227ENST00000508818 EP400Q96L91 3159 aa14.24□□□□□ -0.13
UBE2D3-227ENST00000508818 AATKQ6ZMQ8 1374 aa14.23□□□□□ -0.13
UBE2D3-227ENST00000508818 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
UBE2D3-227ENST00000508818 EN1Q05925 392 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-227ENST00000508818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBE2D3-227ENST00000508818 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
UBE2D3-227ENST00000508818 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
UBE2D3-227ENST00000508818 TRIM37O94972 964 aa14.22□□□□□ -0.13
UBE2D3-227ENST00000508818 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
UBE2D3-227ENST00000508818 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms