RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 IRF7Q92985 503 aa8.94□□□□□ -0.98
GYPB-209ENST00000508618 LINC01559Q495D7 138 aa8.93□□□□□ -0.98
GYPB-209ENST00000508618 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
GYPB-209ENST00000508618 NNTQ13423 1086 aa8.92□□□□□ -0.98
GYPB-209ENST00000508618 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
GYPB-209ENST00000508618 LYPD8Q6UX82 237 aa8.92□□□□□ -0.98
GYPB-209ENST00000508618 ADH1CP00326 375 aa8.91□□□□□ -0.98
GYPB-209ENST00000508618 BEGAINQ9BUH8 593 aa8.91□□□□□ -0.98
GYPB-209ENST00000508618 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
GYPB-209ENST00000508618 TIMP2P16035 220 aa8.9□□□□□ -0.98
GYPB-209ENST00000508618 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
GYPB-209ENST00000508618 ZFP42Q96MM3 310 aa8.9□□□□□ -0.98
GYPB-209ENST00000508618 TBC1D2Q9BYX2 928 aa8.9□□□□□ -0.98
GYPB-209ENST00000508618 SPTLC1O15269 473 aa8.89□□□□□ -0.99
GYPB-209ENST00000508618 GMPRP36959 345 aa8.89□□□□□ -0.99
GYPB-209ENST00000508618 PRPF38BQ5VTL8 546 aaKnown RBP8.89□□□□□ -0.99
GYPB-209ENST00000508618 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
GYPB-209ENST00000508618 CDK15Q96Q40 435 aa8.89□□□□□ -0.99
GYPB-209ENST00000508618 KLF16Q9BXK1 252 aaPredicted RBP8.89□□□□□ -0.99
GYPB-209ENST00000508618 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
GYPB-209ENST00000508618 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
GYPB-209ENST00000508618 ZC3H15Q8WU90 426 aaKnown RBP8.88□□□□□ -0.99
GYPB-209ENST00000508618 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
GYPB-209ENST00000508618 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
GYPB-209ENST00000508618 VSIG8P0DPA2 414 aa8.87□□□□□ -0.99
GYPB-209ENST00000508618 SCARF1Q14162 830 aa8.87□□□□□ -0.99
GYPB-209ENST00000508618 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
GYPB-209ENST00000508618 WDR4P57081 412 aaKnown RBP8.86□□□□□ -0.99
GYPB-209ENST00000508618 HRCP23327 699 aa8.85□□□□□ -0.99
GYPB-209ENST00000508618 CTHP32929 405 aa8.85□□□□□ -0.99
GYPB-209ENST00000508618 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
GYPB-209ENST00000508618 NR5A1Q13285 461 aa8.84□□□□□ -0.99
GYPB-209ENST00000508618 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
GYPB-209ENST00000508618 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
GYPB-209ENST00000508618 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
GYPB-209ENST00000508618 BPHLQ86WA6 291 aaPredicted RBP8.82□□□□□ -1
GYPB-209ENST00000508618 PURBQ96QR8 312 aaKnown RBP8.82□□□□□ -1
GYPB-209ENST00000508618 TRIM66O15016 1216 aa8.81□□□□□ -1
GYPB-209ENST00000508618 VEGFBP49765 207 aa8.81□□□□□ -1
GYPB-209ENST00000508618 FOXJ1Q92949 421 aa8.81□□□□□ -1
GYPB-209ENST00000508618 C1QTNF2Q9BXJ5 285 aa8.81□□□□□ -1
GYPB-209ENST00000508618 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
GYPB-209ENST00000508618 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
GYPB-209ENST00000508618 ARMC2Q8NEN0 867 aa8.8□□□□□ -1
GYPB-209ENST00000508618 MAP4K5Q9Y4K4 846 aa8.8□□□□□ -1
GYPB-209ENST00000508618 ZIC2O95409 532 aaPredicted RBP8.79□□□□□ -1
GYPB-209ENST00000508618 MEIOBQ8N635 442 aa8.79□□□□□ -1
GYPB-209ENST00000508618 NR3C2P08235 984 aa8.78□□□□□ -1
GYPB-209ENST00000508618 GRM5P41594 1212 aa8.78□□□□□ -1
GYPB-209ENST00000508618 NBPF14Q5TI25 921 aa8.78□□□□□ -1
GYPB-209ENST00000508618 SH3RF1Q7Z6J0 888 aa8.78□□□□□ -1
GYPB-209ENST00000508618 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
GYPB-209ENST00000508618 ITPKCQ96DU7 683 aa8.78□□□□□ -1
GYPB-209ENST00000508618 AK7Q96M32 723 aa8.78□□□□□ -1
GYPB-209ENST00000508618 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
GYPB-209ENST00000508618 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
GYPB-209ENST00000508618 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
GYPB-209ENST00000508618 MYSM1Q5VVJ2 828 aa8.76□□□□□ -1.01
GYPB-209ENST00000508618 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
GYPB-209ENST00000508618 LILRB3O75022 631 aa8.75□□□□□ -1.01
GYPB-209ENST00000508618 ARID5BQ14865 1188 aa8.75□□□□□ -1.01
GYPB-209ENST00000508618 AGERQ15109 404 aa8.75□□□□□ -1.01
GYPB-209ENST00000508618 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
GYPB-209ENST00000508618 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
GYPB-209ENST00000508618 GPKOWQ92917 476 aaPredicted RBP eCLIP8.75□□□□□ -1.01
GYPB-209ENST00000508618 MAN1A2O60476 641 aa8.74□□□□□ -1.01
GYPB-209ENST00000508618 UPP2O95045 317 aa8.74□□□□□ -1.01
GYPB-209ENST00000508618 LIMD1Q9UGP4 676 aa8.74□□□□□ -1.01
GYPB-209ENST00000508618 SOBPA7XYQ1 873 aa8.73□□□□□ -1.01
GYPB-209ENST00000508618 FSHRP23945 695 aa8.73□□□□□ -1.01
GYPB-209ENST00000508618 QPCTQ16769 361 aa8.73□□□□□ -1.01
GYPB-209ENST00000508618 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
GYPB-209ENST00000508618 EMILIN1Q9Y6C2 1016 aa8.72□□□□□ -1.01
GYPB-209ENST00000508618 BMP2P12643 396 aa8.71□□□□□ -1.02
GYPB-209ENST00000508618 CSPP1Q1MSJ5 1256 aa8.71□□□□□ -1.02
GYPB-209ENST00000508618 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.02
GYPB-209ENST00000508618 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
GYPB-209ENST00000508618 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
GYPB-209ENST00000508618 PPFIA3O75145 1194 aa8.7□□□□□ -1.02
GYPB-209ENST00000508618 PDE4DQ08499 809 aa8.7□□□□□ -1.02
GYPB-209ENST00000508618 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
GYPB-209ENST00000508618 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
GYPB-209ENST00000508618 TSEN34Q9BSV6 310 aaKnown RBP8.7□□□□□ -1.02
GYPB-209ENST00000508618 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
GYPB-209ENST00000508618 CCDC116Q8IYX3 515 aa8.69□□□□□ -1.02
GYPB-209ENST00000508618 DNMT3LQ9UJW3 386 aa8.69□□□□□ -1.02
GYPB-209ENST00000508618 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
GYPB-209ENST00000508618 TSC1Q92574 1164 aa8.68□□□□□ -1.02
GYPB-209ENST00000508618 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
GYPB-209ENST00000508618 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
GYPB-209ENST00000508618 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
GYPB-209ENST00000508618 ZC3H4Q9UPT8 1303 aaKnown RBP8.65□□□□□ -1.02
GYPB-209ENST00000508618 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
GYPB-209ENST00000508618 ERFEQ4G0M1 354 aa8.65□□□□□ -1.02
GYPB-209ENST00000508618 Q6ZVU0 165 aa8.65□□□□□ -1.02
GYPB-209ENST00000508618 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
GYPB-209ENST00000508618 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
GYPB-209ENST00000508618 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
GYPB-209ENST00000508618 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
GYPB-209ENST00000508618 KCNMA1Q12791 1236 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms