RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
CCSER1-207ENST00000508550 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
CCSER1-207ENST00000508550 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
CCSER1-207ENST00000508550 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
CCSER1-207ENST00000508550 A2MP01023 1474 aa11.49□□□□□ -0.57
CCSER1-207ENST00000508550 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
CCSER1-207ENST00000508550 PTPRTO14522 1441 aa11.48□□□□□ -0.57
CCSER1-207ENST00000508550 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
CCSER1-207ENST00000508550 ZMYM4Q5VZL5 1548 aa11.47□□□□□ -0.57
CCSER1-207ENST00000508550 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
CCSER1-207ENST00000508550 DEPDC5O75140 1603 aa11.46□□□□□ -0.57
CCSER1-207ENST00000508550 NEURL4Q96JN8 1562 aa11.46□□□□□ -0.57
CCSER1-207ENST00000508550 PRDM15P57071 1507 aaPredicted RBP11.46□□□□□ -0.57
CCSER1-207ENST00000508550 UHRF1BP1Q6BDS2 1440 aa11.46□□□□□ -0.57
CCSER1-207ENST00000508550 NBR1Q14596 966 aa11.46□□□□□ -0.57
CCSER1-207ENST00000508550 BCORL1Q5H9F3 1711 aa11.46□□□□□ -0.58
CCSER1-207ENST00000508550 HECW2Q9P2P5 1572 aa11.45□□□□□ -0.58
CCSER1-207ENST00000508550 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
CCSER1-207ENST00000508550 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
CCSER1-207ENST00000508550 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
CCSER1-207ENST00000508550 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
CCSER1-207ENST00000508550 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
CCSER1-207ENST00000508550 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
CCSER1-207ENST00000508550 KIF3BO15066 747 aa11.43□□□□□ -0.58
CCSER1-207ENST00000508550 MAP3K7O43318 606 aa11.43□□□□□ -0.58
CCSER1-207ENST00000508550 KIDINS220Q9ULH0 1771 aa11.43□□□□□ -0.58
CCSER1-207ENST00000508550 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
CCSER1-207ENST00000508550 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
CCSER1-207ENST00000508550 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
CCSER1-207ENST00000508550 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
CCSER1-207ENST00000508550 AGLP35573 1532 aa11.41□□□□□ -0.58
CCSER1-207ENST00000508550 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
CCSER1-207ENST00000508550 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
CCSER1-207ENST00000508550 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
CCSER1-207ENST00000508550 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
CCSER1-207ENST00000508550 BCAMP50895 628 aa11.4□□□□□ -0.58
CCSER1-207ENST00000508550 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
CCSER1-207ENST00000508550 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
CCSER1-207ENST00000508550 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
CCSER1-207ENST00000508550 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
CCSER1-207ENST00000508550 RGS20O76081 388 aa11.39□□□□□ -0.59
CCSER1-207ENST00000508550 OSBPP22059 807 aa11.39□□□□□ -0.59
CCSER1-207ENST00000508550 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
CCSER1-207ENST00000508550 FRMPD1Q5SYB0 1578 aa11.38□□□□□ -0.59
CCSER1-207ENST00000508550 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
CCSER1-207ENST00000508550 TRPM2O94759 1503 aa11.38□□□□□ -0.59
CCSER1-207ENST00000508550 RICTORQ6R327 1708 aa11.38□□□□□ -0.59
CCSER1-207ENST00000508550 TET3O43151 1660 aa11.37□□□□□ -0.59
CCSER1-207ENST00000508550 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
CCSER1-207ENST00000508550 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
CCSER1-207ENST00000508550 PRSS12P56730 875 aa11.37□□□□□ -0.59
CCSER1-207ENST00000508550 EIF4G2P78344 907 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCSER1-207ENST00000508550 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
CCSER1-207ENST00000508550 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
CCSER1-207ENST00000508550 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
CCSER1-207ENST00000508550 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
CCSER1-207ENST00000508550 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 WASHC2CQ9Y4E1 1318 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
CCSER1-207ENST00000508550 GPRASP1Q5JY77 1395 aa11.34□□□□□ -0.59
CCSER1-207ENST00000508550 A0A0G2JS52 829 aa11.34□□□□□ -0.59
CCSER1-207ENST00000508550 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
CCSER1-207ENST00000508550 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
CCSER1-207ENST00000508550 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
CCSER1-207ENST00000508550 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
CCSER1-207ENST00000508550 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
CCSER1-207ENST00000508550 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
CCSER1-207ENST00000508550 NOS1P29475 1434 aa11.33□□□□□ -0.6
CCSER1-207ENST00000508550 ABCC3O15438 1527 aa11.32□□□□□ -0.6
CCSER1-207ENST00000508550 NBPF8Q3BBV2 869 aa11.32□□□□□ -0.6
CCSER1-207ENST00000508550 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
CCSER1-207ENST00000508550 YEATS2Q9ULM3 1422 aa11.32□□□□□ -0.6
CCSER1-207ENST00000508550 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
CCSER1-207ENST00000508550 GGT6Q6P531 493 aa11.31□□□□□ -0.6
CCSER1-207ENST00000508550 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
CCSER1-207ENST00000508550 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
CCSER1-207ENST00000508550 NPATQ14207 1427 aa11.31□□□□□ -0.6
CCSER1-207ENST00000508550 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
CCSER1-207ENST00000508550 DCAF11Q8TEB1 546 aa11.3□□□□□ -0.6
CCSER1-207ENST00000508550 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
CCSER1-207ENST00000508550 COL17A1Q9UMD9 1497 aaPredicted RBP11.29□□□□□ -0.6
CCSER1-207ENST00000508550 E9PCH4 1651 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 C3orf80F5H4A9 247 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 TATDN2Q93075 761 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
CCSER1-207ENST00000508550 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
CCSER1-207ENST00000508550 MYOM2P54296 1465 aa11.27□□□□□ -0.6
CCSER1-207ENST00000508550 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
CCSER1-207ENST00000508550 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
CCSER1-207ENST00000508550 KIF13AQ9H1H9 1805 aa11.27□□□□□ -0.61
CCSER1-207ENST00000508550 ZFYVE9O95405 1425 aa11.26□□□□□ -0.61
CCSER1-207ENST00000508550 SMAPO00193 183 aa11.26□□□□□ -0.61
CCSER1-207ENST00000508550 ROCK2O75116 1388 aaKnown RBP11.26□□□□□ -0.61
CCSER1-207ENST00000508550 NBPF26B4DH59 902 aa11.25□□□□□ -0.61
CCSER1-207ENST00000508550 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms