RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 TTC21BQ7Z4L5 1316 aa23.98■■□□□ 1.43
TRIM60-203ENST00000508504 AMER1Q5JTC6 1135 aaPredicted RBP23.98■■□□□ 1.43
TRIM60-203ENST00000508504 KNSTRNQ9Y448 316 aa23.98■■□□□ 1.43
TRIM60-203ENST00000508504 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
TRIM60-203ENST00000508504 ZRANB1Q9UGI0 708 aa23.97■■□□□ 1.43
TRIM60-203ENST00000508504 TRPM3Q9HCF6 1732 aaPredicted RBP23.97■■□□□ 1.43
TRIM60-203ENST00000508504 NME9Q86XW9 330 aa23.96■■□□□ 1.43
TRIM60-203ENST00000508504 SOS2Q07890 1332 aaPredicted RBP23.96■■□□□ 1.43
TRIM60-203ENST00000508504 FYB1O15117 783 aa23.95■■□□□ 1.42
TRIM60-203ENST00000508504 CC2D1BQ5T0F9 858 aaKnown RBP23.93■■□□□ 1.42
TRIM60-203ENST00000508504 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
TRIM60-203ENST00000508504 GGNBP2Q9H3C7 697 aa23.93■■□□□ 1.42
TRIM60-203ENST00000508504 AHDC1Q5TGY3 1603 aaPredicted RBP23.93■■□□□ 1.42
TRIM60-203ENST00000508504 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
TRIM60-203ENST00000508504 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
TRIM60-203ENST00000508504 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
TRIM60-203ENST00000508504 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
TRIM60-203ENST00000508504 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
TRIM60-203ENST00000508504 PHLPP1O60346 1717 aa23.89■■□□□ 1.42
TRIM60-203ENST00000508504 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.42
TRIM60-203ENST00000508504 ALS2Q96Q42 1657 aa23.89■■□□□ 1.41
TRIM60-203ENST00000508504 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.41
TRIM60-203ENST00000508504 TTC21AQ8NDW8 1320 aa23.89■■□□□ 1.41
TRIM60-203ENST00000508504 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
TRIM60-203ENST00000508504 PLEKHG5O94827 1062 aa23.88■■□□□ 1.41
TRIM60-203ENST00000508504 TNS3Q68CZ2 1445 aa23.88■■□□□ 1.41
TRIM60-203ENST00000508504 COL16A1Q07092 1604 aaPredicted RBP23.88■■□□□ 1.41
TRIM60-203ENST00000508504 BRD4O60885 1362 aaPredicted RBP23.87■■□□□ 1.41
TRIM60-203ENST00000508504 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
TRIM60-203ENST00000508504 NLRP6P59044 892 aa23.86■■□□□ 1.41
TRIM60-203ENST00000508504 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
TRIM60-203ENST00000508504 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
TRIM60-203ENST00000508504 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
TRIM60-203ENST00000508504 FBLN1P23142 703 aa23.84■■□□□ 1.41
TRIM60-203ENST00000508504 HSPA1LP34931 641 aa23.83■■□□□ 1.4
TRIM60-203ENST00000508504 TNNT2P45379 298 aaPredicted RBP23.83■■□□□ 1.4
TRIM60-203ENST00000508504 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
TRIM60-203ENST00000508504 LRRC59Q96AG4 307 aaKnown RBP23.82■■□□□ 1.4
TRIM60-203ENST00000508504 USP31Q70CQ4 1352 aa23.81■■□□□ 1.4
TRIM60-203ENST00000508504 COG3Q96JB2 828 aa23.81■■□□□ 1.4
TRIM60-203ENST00000508504 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
TRIM60-203ENST00000508504 ANKRD26Q9UPS8 1709 aa23.81■■□□□ 1.4
TRIM60-203ENST00000508504 NSD2O96028 1365 aa23.81■■□□□ 1.4
TRIM60-203ENST00000508504 SOX12O15370 315 aa23.8■■□□□ 1.4
TRIM60-203ENST00000508504 MED1Q15648 1581 aaPredicted RBP23.8■■□□□ 1.4
TRIM60-203ENST00000508504 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
TRIM60-203ENST00000508504 PARD3Q8TEW0 1356 aa23.79■■□□□ 1.4
TRIM60-203ENST00000508504 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
TRIM60-203ENST00000508504 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
TRIM60-203ENST00000508504 USP54Q70EL1 1684 aa23.78■■□□□ 1.4
TRIM60-203ENST00000508504 PNPLA6Q8IY17 1366 aa23.77■■□□□ 1.39
TRIM60-203ENST00000508504 USP19O94966 1318 aa23.76■■□□□ 1.39
TRIM60-203ENST00000508504 ANP32CO43423 234 aa23.76■■□□□ 1.39
TRIM60-203ENST00000508504 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
TRIM60-203ENST00000508504 FBXO41Q8TF61 875 aa23.73■■□□□ 1.39
TRIM60-203ENST00000508504 GCP02774 474 aa23.73■■□□□ 1.39
TRIM60-203ENST00000508504 MIER1Q8N108 512 aa23.73■■□□□ 1.39
TRIM60-203ENST00000508504 SLIT3O75094 1523 aa23.73■■□□□ 1.39
TRIM60-203ENST00000508504 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
TRIM60-203ENST00000508504 RALBP1Q15311 655 aa23.72■■□□□ 1.39
TRIM60-203ENST00000508504 PHRF1Q9P1Y6 1649 aaKnown RBP23.72■■□□□ 1.39
TRIM60-203ENST00000508504 NFAT5O94916 1531 aa23.71■■□□□ 1.39
TRIM60-203ENST00000508504 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
TRIM60-203ENST00000508504 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.39
TRIM60-203ENST00000508504 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
TRIM60-203ENST00000508504 MAP2P11137 1827 aaKnown RBP23.69■■□□□ 1.38
TRIM60-203ENST00000508504 EMILIN1Q9Y6C2 1016 aa23.69■■□□□ 1.38
TRIM60-203ENST00000508504 ZC3H6P61129 1189 aaKnown RBP23.68■■□□□ 1.38
TRIM60-203ENST00000508504 JCADQ9P266 1359 aa23.68■■□□□ 1.38
TRIM60-203ENST00000508504 POLKQ9UBT6 870 aa23.68■■□□□ 1.38
TRIM60-203ENST00000508504 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TRIM60-203ENST00000508504 AATKQ6ZMQ8 1374 aa23.66■■□□□ 1.38
TRIM60-203ENST00000508504 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
TRIM60-203ENST00000508504 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
TRIM60-203ENST00000508504 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
TRIM60-203ENST00000508504 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
TRIM60-203ENST00000508504 PPM1GO15355 546 aaPredicted RBP23.64■■□□□ 1.38
TRIM60-203ENST00000508504 MTHFSP49914 203 aa23.64■■□□□ 1.38
TRIM60-203ENST00000508504 LTN1O94822 1766 aa23.64■■□□□ 1.37
TRIM60-203ENST00000508504 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
TRIM60-203ENST00000508504 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.37
TRIM60-203ENST00000508504 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
TRIM60-203ENST00000508504 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
TRIM60-203ENST00000508504 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
TRIM60-203ENST00000508504 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
TRIM60-203ENST00000508504 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
TRIM60-203ENST00000508504 ARHGEF25Q86VW2 580 aa23.63■■□□□ 1.37
TRIM60-203ENST00000508504 CHRNA2Q15822 529 aa23.61■■□□□ 1.37
TRIM60-203ENST00000508504 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
TRIM60-203ENST00000508504 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
TRIM60-203ENST00000508504 LRP6O75581 1613 aa23.59■■□□□ 1.37
TRIM60-203ENST00000508504 AXIN2Q9Y2T1 843 aa23.58■■□□□ 1.37
TRIM60-203ENST00000508504 CPDO75976 1380 aa23.57■■□□□ 1.36
TRIM60-203ENST00000508504 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
TRIM60-203ENST00000508504 HSP90AB2PQ58FF8 381 aa23.57■■□□□ 1.36
TRIM60-203ENST00000508504 AMPHP49418 695 aa23.57■■□□□ 1.36
TRIM60-203ENST00000508504 HOXC9P31274 260 aa23.56■■□□□ 1.36
TRIM60-203ENST00000508504 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
TRIM60-203ENST00000508504 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
TRIM60-203ENST00000508504 COL18A1P39060 1754 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms