RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
PTPN20-218ENST00000508357 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
PTPN20-218ENST00000508357 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
PTPN20-218ENST00000508357 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
PTPN20-218ENST00000508357 MYOM1P52179 1685 aa17.45■□□□□ 0.38
PTPN20-218ENST00000508357 ADAMTS2O95450 1211 aa17.43■□□□□ 0.38
PTPN20-218ENST00000508357 CABLES1Q8TDN4 633 aa17.43■□□□□ 0.38
PTPN20-218ENST00000508357 MEX3CQ5U5Q3 659 aaKnown RBP17.42■□□□□ 0.38
PTPN20-218ENST00000508357 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
PTPN20-218ENST00000508357 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
PTPN20-218ENST00000508357 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
PTPN20-218ENST00000508357 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
PTPN20-218ENST00000508357 AFF2P51816 1311 aa17.4■□□□□ 0.38
PTPN20-218ENST00000508357 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
PTPN20-218ENST00000508357 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
PTPN20-218ENST00000508357 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
PTPN20-218ENST00000508357 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
PTPN20-218ENST00000508357 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.37
PTPN20-218ENST00000508357 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
PTPN20-218ENST00000508357 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
PTPN20-218ENST00000508357 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
PTPN20-218ENST00000508357 SLIT3O75094 1523 aa17.38■□□□□ 0.37
PTPN20-218ENST00000508357 SLIT2O94813 1529 aa17.38■□□□□ 0.37
PTPN20-218ENST00000508357 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
PTPN20-218ENST00000508357 USP19O94966 1318 aa17.38■□□□□ 0.37
PTPN20-218ENST00000508357 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
PTPN20-218ENST00000508357 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
PTPN20-218ENST00000508357 TMF1P82094 1093 aa17.36■□□□□ 0.37
PTPN20-218ENST00000508357 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
PTPN20-218ENST00000508357 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
PTPN20-218ENST00000508357 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
PTPN20-218ENST00000508357 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
PTPN20-218ENST00000508357 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
PTPN20-218ENST00000508357 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
PTPN20-218ENST00000508357 ATRNO75882 1429 aa17.34■□□□□ 0.37
PTPN20-218ENST00000508357 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTPN20-218ENST00000508357 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
PTPN20-218ENST00000508357 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
PTPN20-218ENST00000508357 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
PTPN20-218ENST00000508357 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
PTPN20-218ENST00000508357 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
PTPN20-218ENST00000508357 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
PTPN20-218ENST00000508357 NGLY1Q96IV0 654 aa17.32■□□□□ 0.36
PTPN20-218ENST00000508357 NFAT5O94916 1531 aa17.31■□□□□ 0.36
PTPN20-218ENST00000508357 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
PTPN20-218ENST00000508357 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-218ENST00000508357 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-218ENST00000508357 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
PTPN20-218ENST00000508357 ZRANB1Q9UGI0 708 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 GLI3P10071 1580 aa17.3■□□□□ 0.36
PTPN20-218ENST00000508357 FAM83GA6ND36 823 aa17.29■□□□□ 0.36
PTPN20-218ENST00000508357 C11orf95C9JLR9 678 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-218ENST00000508357 RGS12O14924 1447 aa17.29■□□□□ 0.36
PTPN20-218ENST00000508357 CPDO75976 1380 aa17.28■□□□□ 0.36
PTPN20-218ENST00000508357 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
PTPN20-218ENST00000508357 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
PTPN20-218ENST00000508357 NME9Q86XW9 330 aa17.28■□□□□ 0.36
PTPN20-218ENST00000508357 USP21Q9UK80 565 aa17.28■□□□□ 0.36
PTPN20-218ENST00000508357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPN20-218ENST00000508357 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
PTPN20-218ENST00000508357 COL18A1P39060 1754 aa17.27■□□□□ 0.35
PTPN20-218ENST00000508357 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
PTPN20-218ENST00000508357 NLRP6P59044 892 aa17.26■□□□□ 0.35
PTPN20-218ENST00000508357 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
PTPN20-218ENST00000508357 NLRP13Q86W25 1043 aa17.26■□□□□ 0.35
PTPN20-218ENST00000508357 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
PTPN20-218ENST00000508357 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
PTPN20-218ENST00000508357 GCP02774 474 aa17.25■□□□□ 0.35
PTPN20-218ENST00000508357 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
PTPN20-218ENST00000508357 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
PTPN20-218ENST00000508357 UNC5CLQ8IV45 518 aa17.24■□□□□ 0.35
PTPN20-218ENST00000508357 QTRT2Q9H974 415 aaKnown RBP17.24■□□□□ 0.35
PTPN20-218ENST00000508357 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
PTPN20-218ENST00000508357 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
PTPN20-218ENST00000508357 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
PTPN20-218ENST00000508357 TRPC5Q9UL62 973 aaPredicted RBP17.23■□□□□ 0.35
PTPN20-218ENST00000508357 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
PTPN20-218ENST00000508357 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
PTPN20-218ENST00000508357 RXRBP28702 533 aa17.21■□□□□ 0.35
PTPN20-218ENST00000508357 LTN1O94822 1766 aa17.2■□□□□ 0.34
PTPN20-218ENST00000508357 COL5A2P05997 1499 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-218ENST00000508357 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
PTPN20-218ENST00000508357 ABCC6O95255 1503 aa17.2■□□□□ 0.34
PTPN20-218ENST00000508357 VPS72Q15906 364 aa17.19■□□□□ 0.34
PTPN20-218ENST00000508357 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
PTPN20-218ENST00000508357 RGPD5Q99666 1765 aa17.19■□□□□ 0.34
PTPN20-218ENST00000508357 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
PTPN20-218ENST00000508357 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
PTPN20-218ENST00000508357 SOX12O15370 315 aa17.18■□□□□ 0.34
PTPN20-218ENST00000508357 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
PTPN20-218ENST00000508357 ARHGEF25Q86VW2 580 aa17.17■□□□□ 0.34
PTPN20-218ENST00000508357 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
PTPN20-218ENST00000508357 FYB1O15117 783 aa17.16■□□□□ 0.34
PTPN20-218ENST00000508357 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 BRWD3Q6RI45 1802 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 SOCS7O14512 581 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms