RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 PCDHB15Q9Y5E8 787 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 J3QL48 77 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 SPTLC1O15269 473 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 HRCP23327 699 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 WNT7BP56706 349 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 SKOR1P84550 965 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 PTPRNQ16849 979 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 MYSM1Q5VVJ2 828 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 BAP1Q92560 729 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 UNC93B1Q9H1C4 597 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 AAASQ9NRG9 546 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 POLR3EQ9NVU0 708 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 WASF2Q9Y6W5 498 aa3.52□□□□□ -1.85
SMN2-208ENST00000508258 CFAP99D6REC4 459 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 SMPD1P17405 629 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 GJA5P36382 358 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 CLK2P49760 499 aaKnown RBP3.51□□□□□ -1.85
SMN2-208ENST00000508258 KCNH2Q12809 1159 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 MCM6Q14566 821 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 AGERQ15109 404 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMN2-208ENST00000508258 EVA1BQ9NVM1 165 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 LIMD1Q9UGP4 676 aa3.51□□□□□ -1.85
SMN2-208ENST00000508258 POTECB2RU33 542 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 TRAK2O60296 914 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 SH3BP2P78314 561 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 ARID5BQ14865 1188 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 QPCTQ16769 361 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 CTC1Q2NKJ3 1217 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 PRPF38BQ5VTL8 546 aaKnown RBP3.5□□□□□ -1.85
SMN2-208ENST00000508258 DESI1Q6ICB0 168 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 ZNF511Q8NB15 262 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 PROCA1Q8NCQ7 364 aaPredicted RBP3.5□□□□□ -1.85
SMN2-208ENST00000508258 HELBQ8NG08 1087 aaPredicted RBP3.5□□□□□ -1.85
SMN2-208ENST00000508258 HPS1Q92902 700 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 CLUAP1Q96AJ1 413 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 MAP10Q9P2G4 905 aa3.5□□□□□ -1.85
SMN2-208ENST00000508258 ARID3CA6NKF2 412 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 C11orf95C9JLR9 678 aaPredicted RBP3.49□□□□□ -1.85
SMN2-208ENST00000508258 APBB1O00213 710 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 PER1O15534 1290 aaPredicted RBP3.49□□□□□ -1.85
SMN2-208ENST00000508258 AVPP01185 164 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 LYPD8Q6UX82 237 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 FNBP4Q8N3X1 1017 aaPredicted RBP3.49□□□□□ -1.85
SMN2-208ENST00000508258 GMPR2Q9P2T1 348 aaKnown RBP3.49□□□□□ -1.85
SMN2-208ENST00000508258 DACH1Q9UI36 760 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 TLL2Q9Y6L7 1015 aa3.49□□□□□ -1.85
SMN2-208ENST00000508258 RTL5Q5HYW3 569 aaPredicted RBP3.48□□□□□ -1.85
SMN2-208ENST00000508258 FBXO31Q5XUX0 539 aaPredicted RBP3.48□□□□□ -1.85
SMN2-208ENST00000508258 CRIPAKQ8N1N5 446 aa3.48□□□□□ -1.85
SMN2-208ENST00000508258 BANK1Q8NDB2 785 aa3.48□□□□□ -1.85
SMN2-208ENST00000508258 ZNF775Q96BV0 537 aaPredicted RBP3.48□□□□□ -1.85
SMN2-208ENST00000508258 MAGEB6P1A0A0J9YX57 407 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 CAPN5O15484 640 aaPredicted RBP3.47□□□□□ -1.85
SMN2-208ENST00000508258 LILRB3O75022 631 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 BMP1P13497 986 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 VARSP26640 1264 aaKnown RBP3.47□□□□□ -1.85
SMN2-208ENST00000508258 TUSC1Q2TAM9 212 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 PPP2R2DQ66LE6 453 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 FAM174AQ8TBP5 190 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 FOXJ1Q92949 421 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 CARD14Q9BXL6 1004 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 ATP13A2Q9NQ11 1180 aa3.47□□□□□ -1.85
SMN2-208ENST00000508258 SIAH2O43255 324 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 F12P00748 615 aaPredicted RBP3.46□□□□□ -1.86
SMN2-208ENST00000508258 RFC5P40937 340 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 SMCPP49901 116 aaPredicted RBP3.46□□□□□ -1.86
SMN2-208ENST00000508258 CTDSPL2Q05D32 466 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 NNTQ13423 1086 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 NBPF14Q5TI25 921 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 BPHLQ86WA6 291 aaPredicted RBP3.46□□□□□ -1.86
SMN2-208ENST00000508258 PROSER2Q86WR7 435 aaPredicted RBP3.46□□□□□ -1.86
SMN2-208ENST00000508258 ARMC2Q8NEN0 867 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 POM121Q96HA1 1249 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 ARID3AQ99856 593 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 SENP2Q9HC62 589 aa3.46□□□□□ -1.86
SMN2-208ENST00000508258 SOCS7O14512 581 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 AP1G2O75843 785 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 SNRPBP14678 240 aaKnown RBP3.45□□□□□ -1.86
SMN2-208ENST00000508258 TMEM259Q4ZIN3 620 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 CCDC82Q8N4S0 544 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 SNRKQ9NRH2 765 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 COG6Q9Y2V7 657 aa3.45□□□□□ -1.86
SMN2-208ENST00000508258 RAD21O60216 631 aa3.44□□□□□ -1.86
SMN2-208ENST00000508258 ADH1CP00326 375 aa3.44□□□□□ -1.86
SMN2-208ENST00000508258 WDR4P57081 412 aaKnown RBP3.44□□□□□ -1.86
SMN2-208ENST00000508258 TRIM26Q12899 539 aaPredicted RBP3.44□□□□□ -1.86
SMN2-208ENST00000508258 VASH1Q7L8A9 365 aaPredicted RBP3.44□□□□□ -1.86
SMN2-208ENST00000508258 LRRN4Q8WUT4 740 aa3.44□□□□□ -1.86
SMN2-208ENST00000508258 KIFC2Q96AC6 838 aa3.44□□□□□ -1.86
SMN2-208ENST00000508258 ZNF777Q9ULD5 760 aaPredicted RBP3.44□□□□□ -1.86
SMN2-208ENST00000508258 ZIC2O95409 532 aaPredicted RBP3.43□□□□□ -1.86
SMN2-208ENST00000508258 FSHRP23945 695 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 SCARF1Q14162 830 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 NR6A1Q15406 480 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 MTMR14Q8NCE2 650 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 TRIM47Q96LD4 638 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 ARHGAP9Q9BRR9 750 aa3.43□□□□□ -1.86
SMN2-208ENST00000508258 UPP2O95045 317 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 NR5A1Q13285 461 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms