RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
RNF4-210ENST00000508235 USP6P35125 1406 aa20.94■□□□□ 0.94
RNF4-210ENST00000508235 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
RNF4-210ENST00000508235 TERF2IPQ9NYB0 399 aa20.92■□□□□ 0.94
RNF4-210ENST00000508235 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
RNF4-210ENST00000508235 MON2Q7Z3U7 1717 aa20.91■□□□□ 0.94
RNF4-210ENST00000508235 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
RNF4-210ENST00000508235 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
RNF4-210ENST00000508235 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
RNF4-210ENST00000508235 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
RNF4-210ENST00000508235 ABCA3Q99758 1704 aa20.88■□□□□ 0.93
RNF4-210ENST00000508235 ABTB2Q8N961 1025 aa20.88■□□□□ 0.93
RNF4-210ENST00000508235 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
RNF4-210ENST00000508235 TTC21AQ8NDW8 1320 aa20.86■□□□□ 0.93
RNF4-210ENST00000508235 NRKQ7Z2Y5 1582 aa20.86■□□□□ 0.93
RNF4-210ENST00000508235 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
RNF4-210ENST00000508235 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
RNF4-210ENST00000508235 NLRP13Q86W25 1043 aa20.85■□□□□ 0.93
RNF4-210ENST00000508235 CRYBG1Q9Y4K1 1723 aa20.84■□□□□ 0.93
RNF4-210ENST00000508235 EDC4Q6P2E9 1401 aaKnown RBP20.84■□□□□ 0.93
RNF4-210ENST00000508235 A0A1W2PP64 1363 aa20.84■□□□□ 0.93
RNF4-210ENST00000508235 ANKRD36BQ8N2N9 1353 aa20.84■□□□□ 0.93
RNF4-210ENST00000508235 TTC21BQ7Z4L5 1316 aa20.83■□□□□ 0.93
RNF4-210ENST00000508235 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
RNF4-210ENST00000508235 CABLES1Q8TDN4 633 aa20.83■□□□□ 0.93
RNF4-210ENST00000508235 C8orf37Q96NL8 207 aa20.83■□□□□ 0.93
RNF4-210ENST00000508235 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
RNF4-210ENST00000508235 ZNF772Q68DY9 489 aaPredicted RBP20.82■□□□□ 0.92
RNF4-210ENST00000508235 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
RNF4-210ENST00000508235 MYOM1P52179 1685 aa20.82■□□□□ 0.92
RNF4-210ENST00000508235 PHRF1Q9P1Y6 1649 aaKnown RBP20.82■□□□□ 0.92
RNF4-210ENST00000508235 PIK3C2AO00443 1686 aa20.81■□□□□ 0.92
RNF4-210ENST00000508235 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
RNF4-210ENST00000508235 NLRP6P59044 892 aa20.8■□□□□ 0.92
RNF4-210ENST00000508235 AFF2P51816 1311 aa20.79■□□□□ 0.92
RNF4-210ENST00000508235 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
RNF4-210ENST00000508235 USP19O94966 1318 aa20.78■□□□□ 0.92
RNF4-210ENST00000508235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■□□ 15.9
RNF4-210ENST00000508235 FNBP4Q8N3X1 1017 aaPredicted RBP20.77■□□□□ 0.92
RNF4-210ENST00000508235 RGS17Q9UGC6 210 aaPredicted RBP20.77■□□□□ 0.92
RNF4-210ENST00000508235 USP54Q70EL1 1684 aa20.76■□□□□ 0.91
RNF4-210ENST00000508235 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
RNF4-210ENST00000508235 COL14A1Q05707 1796 aaKnown RBP20.75■□□□□ 0.91
RNF4-210ENST00000508235 USP31Q70CQ4 1352 aa20.74■□□□□ 0.91
RNF4-210ENST00000508235 SLIT3O75094 1523 aa20.74■□□□□ 0.91
RNF4-210ENST00000508235 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
RNF4-210ENST00000508235 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
RNF4-210ENST00000508235 USP21Q9UK80 565 aa20.74■□□□□ 0.91
RNF4-210ENST00000508235 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
RNF4-210ENST00000508235 GCP02774 474 aa20.73■□□□□ 0.91
RNF4-210ENST00000508235 PRDM11Q9NQV5 511 aa20.73■□□□□ 0.91
RNF4-210ENST00000508235 C11orf95C9JLR9 678 aaPredicted RBP20.72■□□□□ 0.91
RNF4-210ENST00000508235 NME9Q86XW9 330 aa20.72■□□□□ 0.91
RNF4-210ENST00000508235 SLIT2O94813 1529 aa20.72■□□□□ 0.91
RNF4-210ENST00000508235 CPDO75976 1380 aa20.72■□□□□ 0.91
RNF4-210ENST00000508235 FAM83GA6ND36 823 aa20.71■□□□□ 0.91
RNF4-210ENST00000508235 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
RNF4-210ENST00000508235 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
RNF4-210ENST00000508235 KIAA0232Q92628 1395 aa20.71■□□□□ 0.91
RNF4-210ENST00000508235 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
RNF4-210ENST00000508235 TRPC5Q9UL62 973 aaPredicted RBP20.7■□□□□ 0.9
RNF4-210ENST00000508235 BCL9LQ86UU0 1499 aa20.69■□□□□ 0.9
RNF4-210ENST00000508235 POTEAQ6S8J7 498 aa20.69■□□□□ 0.9
RNF4-210ENST00000508235 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
RNF4-210ENST00000508235 COG3Q96JB2 828 aa20.68■□□□□ 0.9
RNF4-210ENST00000508235 QTRT2Q9H974 415 aaKnown RBP20.68■□□□□ 0.9
RNF4-210ENST00000508235 NSD3Q9BZ95 1437 aa20.68■□□□□ 0.9
RNF4-210ENST00000508235 CARD14Q9BXL6 1004 aa20.67■□□□□ 0.9
RNF4-210ENST00000508235 OVOS2A0A0J9YW53 1432 aa20.67■□□□□ 0.9
RNF4-210ENST00000508235 OVOS2Q6IE36 1432 aa20.67■□□□□ 0.9
RNF4-210ENST00000508235 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
RNF4-210ENST00000508235 CGNL1Q0VF96 1302 aa20.66■□□□□ 0.9
RNF4-210ENST00000508235 CCDC7Q96M83 1385 aa20.66■□□□□ 0.9
RNF4-210ENST00000508235 NRAPQ86VF7 1730 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 ATRNO75882 1429 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 FYB1O15117 783 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 RXRBP28702 533 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 PANK3Q9H999 370 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 ZRANB1Q9UGI0 708 aa20.65■□□□□ 0.9
RNF4-210ENST00000508235 NFAT5O94916 1531 aa20.64■□□□□ 0.9
RNF4-210ENST00000508235 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
RNF4-210ENST00000508235 CHRNA2Q15822 529 aa20.64■□□□□ 0.89
RNF4-210ENST00000508235 AATKQ6ZMQ8 1374 aa20.63■□□□□ 0.89
RNF4-210ENST00000508235 SOX12O15370 315 aa20.63■□□□□ 0.89
RNF4-210ENST00000508235 LMO7Q8WWI1 1683 aa20.63■□□□□ 0.89
RNF4-210ENST00000508235 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
RNF4-210ENST00000508235 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
RNF4-210ENST00000508235 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
RNF4-210ENST00000508235 ABCC6O95255 1503 aa20.62■□□□□ 0.89
RNF4-210ENST00000508235 LTN1O94822 1766 aa20.62■□□□□ 0.89
RNF4-210ENST00000508235 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
RNF4-210ENST00000508235 VPS72Q15906 364 aa20.61■□□□□ 0.89
RNF4-210ENST00000508235 CDK12Q9NYV4 1490 aaPredicted RBP20.61■□□□□ 0.89
RNF4-210ENST00000508235 EVA1CP58658 441 aa20.6■□□□□ 0.89
RNF4-210ENST00000508235 GJD4Q96KN9 370 aaPredicted RBP20.6■□□□□ 0.89
RNF4-210ENST00000508235 ANKRD26Q9UPS8 1709 aa20.6■□□□□ 0.89
RNF4-210ENST00000508235 COL18A1P39060 1754 aa20.59■□□□□ 0.89
RNF4-210ENST00000508235 CAMTA1Q9Y6Y1 1673 aa20.59■□□□□ 0.89
RNF4-210ENST00000508235 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
RNF4-210ENST00000508235 CCDC9Q9Y3X0 531 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms