RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 TTC21BQ7Z4L5 1316 aa21.72■■□□□ 1.07
SPSB4-203ENST00000508126 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
SPSB4-203ENST00000508126 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
SPSB4-203ENST00000508126 MTHFSP49914 203 aa21.71■■□□□ 1.07
SPSB4-203ENST00000508126 BLMP54132 1417 aaPredicted RBP21.7■■□□□ 1.06
SPSB4-203ENST00000508126 TTC21AQ8NDW8 1320 aa21.7■■□□□ 1.06
SPSB4-203ENST00000508126 COG3Q96JB2 828 aa21.7■■□□□ 1.06
SPSB4-203ENST00000508126 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
SPSB4-203ENST00000508126 DCCP43146 1447 aa21.69■■□□□ 1.06
SPSB4-203ENST00000508126 PHF8Q9UPP1 1060 aa21.69■■□□□ 1.06
SPSB4-203ENST00000508126 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
SPSB4-203ENST00000508126 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
SPSB4-203ENST00000508126 ESCO1Q5FWF5 840 aa21.66■■□□□ 1.06
SPSB4-203ENST00000508126 OVOS2A0A0J9YW53 1432 aa21.65■■□□□ 1.06
SPSB4-203ENST00000508126 OVOS2Q6IE36 1432 aa21.65■■□□□ 1.06
SPSB4-203ENST00000508126 AATKQ6ZMQ8 1374 aa21.65■■□□□ 1.06
SPSB4-203ENST00000508126 ATF3P18847 181 aa21.64■■□□□ 1.06
SPSB4-203ENST00000508126 ZRANB1Q9UGI0 708 aa21.64■■□□□ 1.05
SPSB4-203ENST00000508126 MSH6P52701 1360 aa21.63■■□□□ 1.05
SPSB4-203ENST00000508126 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
SPSB4-203ENST00000508126 C1orf167Q5SNV9 1468 aa21.62■■□□□ 1.05
SPSB4-203ENST00000508126 ZNF335Q9H4Z2 1342 aaPredicted RBP21.61■■□□□ 1.05
SPSB4-203ENST00000508126 KIF1AQ12756 1690 aa21.61■■□□□ 1.05
SPSB4-203ENST00000508126 CADPS2Q86UW7 1296 aa21.61■■□□□ 1.05
SPSB4-203ENST00000508126 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
SPSB4-203ENST00000508126 SMG6Q86US8 1419 aaKnown RBP21.6■■□□□ 1.05
SPSB4-203ENST00000508126 USP31Q70CQ4 1352 aa21.6■■□□□ 1.05
SPSB4-203ENST00000508126 COL3A1P02461 1466 aaPredicted RBP21.6■■□□□ 1.05
SPSB4-203ENST00000508126 POLKQ9UBT6 870 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 MST1RQ04912 1400 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 PNPLA6Q8IY17 1366 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 ORAI2Q96SN7 254 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
SPSB4-203ENST00000508126 PSME1Q06323 249 aa21.58■■□□□ 1.04
SPSB4-203ENST00000508126 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.04
SPSB4-203ENST00000508126 MAP2P11137 1827 aaKnown RBP21.56■■□□□ 1.04
SPSB4-203ENST00000508126 XIRP1Q702N8 1843 aaKnown RBP21.56■■□□□ 1.04
SPSB4-203ENST00000508126 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-203ENST00000508126 PAK3O75914 559 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-203ENST00000508126 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
SPSB4-203ENST00000508126 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
SPSB4-203ENST00000508126 DIAPH1O60610 1272 aaKnown RBP21.54■■□□□ 1.04
SPSB4-203ENST00000508126 FBLN1P23142 703 aa21.54■■□□□ 1.04
SPSB4-203ENST00000508126 NLRP6P59044 892 aa21.54■■□□□ 1.04
SPSB4-203ENST00000508126 EMILIN1Q9Y6C2 1016 aa21.54■■□□□ 1.04
SPSB4-203ENST00000508126 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
SPSB4-203ENST00000508126 FOXO3O43524 673 aa21.53■■□□□ 1.04
SPSB4-203ENST00000508126 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
SPSB4-203ENST00000508126 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
SPSB4-203ENST00000508126 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPSB4-203ENST00000508126 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
SPSB4-203ENST00000508126 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
SPSB4-203ENST00000508126 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
SPSB4-203ENST00000508126 NGEFQ8N5V2 710 aa21.49■■□□□ 1.03
SPSB4-203ENST00000508126 RUNDC1Q96C34 613 aa21.49■■□□□ 1.03
SPSB4-203ENST00000508126 PDE3BQ13370 1112 aa21.48■■□□□ 1.03
SPSB4-203ENST00000508126 SOX12O15370 315 aa21.48■■□□□ 1.03
SPSB4-203ENST00000508126 MARF1Q9Y4F3 1742 aaKnown RBP21.48■■□□□ 1.03
SPSB4-203ENST00000508126 NUTM2GQ5VZR2 741 aa21.47■■□□□ 1.03
SPSB4-203ENST00000508126 KRT28Q7Z3Y7 464 aa21.47■■□□□ 1.03
SPSB4-203ENST00000508126 APAF1O14727 1248 aa21.46■■□□□ 1.03
SPSB4-203ENST00000508126 TRPM3Q9HCF6 1732 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-203ENST00000508126 XPCQ01831 940 aaPredicted RBP21.46■■□□□ 1.03
SPSB4-203ENST00000508126 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
SPSB4-203ENST00000508126 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
SPSB4-203ENST00000508126 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
SPSB4-203ENST00000508126 MAP3K19Q56UN5 1328 aa21.45■■□□□ 1.02
SPSB4-203ENST00000508126 SBNO1A3KN83 1393 aa21.45■■□□□ 1.02
SPSB4-203ENST00000508126 FLT4P35916 1363 aa21.43■■□□□ 1.02
SPSB4-203ENST00000508126 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
SPSB4-203ENST00000508126 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
SPSB4-203ENST00000508126 PEAK1Q9H792 1746 aa21.43■■□□□ 1.02
SPSB4-203ENST00000508126 IL13P35225 146 aa21.43■■□□□ 1.02
SPSB4-203ENST00000508126 AMPHP49418 695 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 FCHSD2O94868 740 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 TCP11L2Q8N4U5 519 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 SLAIN2Q9P270 581 aa21.41■■□□□ 1.02
SPSB4-203ENST00000508126 ZNF521Q96K83 1311 aa21.4■■□□□ 1.02
SPSB4-203ENST00000508126 LMOD2Q6P5Q4 547 aa21.4■■□□□ 1.02
SPSB4-203ENST00000508126 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
SPSB4-203ENST00000508126 RTL1A6NKG5 1358 aa21.39■■□□□ 1.01
SPSB4-203ENST00000508126 SLIT3O75094 1523 aa21.39■■□□□ 1.01
SPSB4-203ENST00000508126 NFAT5O94916 1531 aa21.39■■□□□ 1.01
SPSB4-203ENST00000508126 ALS2Q96Q42 1657 aa21.38■■□□□ 1.01
SPSB4-203ENST00000508126 PLEKHF1Q96S99 279 aa21.38■■□□□ 1.01
SPSB4-203ENST00000508126 NEFMP07197 916 aa21.38■■□□□ 1.01
SPSB4-203ENST00000508126 EIF4A2Q14240 407 aaKnown RBP21.38■■□□□ 1.01
SPSB4-203ENST00000508126 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
SPSB4-203ENST00000508126 HSP90AB2PQ58FF8 381 aa21.38■■□□□ 1.01
SPSB4-203ENST00000508126 USP19O94966 1318 aa21.37■■□□□ 1.01
SPSB4-203ENST00000508126 PXDNQ92626 1479 aa21.37■■□□□ 1.01
SPSB4-203ENST00000508126 TNS3Q68CZ2 1445 aa21.36■■□□□ 1.01
SPSB4-203ENST00000508126 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SPSB4-203ENST00000508126 RSPH6AQ9H0K4 717 aa21.36■■□□□ 1.01
SPSB4-203ENST00000508126 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
SPSB4-203ENST00000508126 LTBP4Q8N2S1 1624 aa21.35■■□□□ 1.01
SPSB4-203ENST00000508126 HMOX1P09601 288 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms