RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
PDGFRA-205ENST00000507536 STK26Q9P289 416 aa15.44■□□□□ 0.06
PDGFRA-205ENST00000507536 USP21Q9UK80 565 aa15.44■□□□□ 0.06
PDGFRA-205ENST00000507536 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
PDGFRA-205ENST00000507536 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
PDGFRA-205ENST00000507536 FOXO3O43524 673 aa15.43■□□□□ 0.06
PDGFRA-205ENST00000507536 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
PDGFRA-205ENST00000507536 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
PDGFRA-205ENST00000507536 SLIT2O94813 1529 aa15.43■□□□□ 0.06
PDGFRA-205ENST00000507536 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
PDGFRA-205ENST00000507536 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
PDGFRA-205ENST00000507536 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
PDGFRA-205ENST00000507536 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
PDGFRA-205ENST00000507536 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
PDGFRA-205ENST00000507536 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
PDGFRA-205ENST00000507536 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
PDGFRA-205ENST00000507536 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
PDGFRA-205ENST00000507536 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
PDGFRA-205ENST00000507536 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
PDGFRA-205ENST00000507536 TNS3Q68CZ2 1445 aa15.38■□□□□ 0.05
PDGFRA-205ENST00000507536 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
PDGFRA-205ENST00000507536 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
PDGFRA-205ENST00000507536 SIRT1Q96EB6 747 aa15.37■□□□□ 0.05
PDGFRA-205ENST00000507536 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
PDGFRA-205ENST00000507536 CFAP70Q5T0N1 1121 aa15.35■□□□□ 0.05
PDGFRA-205ENST00000507536 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
PDGFRA-205ENST00000507536 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
PDGFRA-205ENST00000507536 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
PDGFRA-205ENST00000507536 GJD4Q96KN9 370 aaPredicted RBP15.33■□□□□ 0.04
PDGFRA-205ENST00000507536 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
PDGFRA-205ENST00000507536 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.04
PDGFRA-205ENST00000507536 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
PDGFRA-205ENST00000507536 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
PDGFRA-205ENST00000507536 SBNO1A3KN83 1393 aa15.32■□□□□ 0.04
PDGFRA-205ENST00000507536 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 GABBR2O75899 941 aa15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 TULP4Q9NRJ4 1543 aa15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 TOPAZ1Q8N9V7 1692 aa15.31■□□□□ 0.04
PDGFRA-205ENST00000507536 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
PDGFRA-205ENST00000507536 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
PDGFRA-205ENST00000507536 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDGFRA-205ENST00000507536 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
PDGFRA-205ENST00000507536 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
PDGFRA-205ENST00000507536 ARHGEF10O15013 1369 aa15.27■□□□□ 0.04
PDGFRA-205ENST00000507536 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
PDGFRA-205ENST00000507536 KIAA1210Q9ULL0 1709 aa15.27■□□□□ 0.04
PDGFRA-205ENST00000507536 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
PDGFRA-205ENST00000507536 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
PDGFRA-205ENST00000507536 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
PDGFRA-205ENST00000507536 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
PDGFRA-205ENST00000507536 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
PDGFRA-205ENST00000507536 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
PDGFRA-205ENST00000507536 ATP7BP35670 1465 aa15.25■□□□□ 0.03
PDGFRA-205ENST00000507536 PSME1Q06323 249 aa15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 VPS72Q15906 364 aa15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 PMFBP1Q8TBY8 1022 aa15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 PHF12Q96QT6 1004 aa15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
PDGFRA-205ENST00000507536 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
PDGFRA-205ENST00000507536 LRP5O75197 1615 aa15.23■□□□□ 0.03
PDGFRA-205ENST00000507536 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
PDGFRA-205ENST00000507536 ONECUT3O60422 494 aaPredicted RBP15.22■□□□□ 0.03
PDGFRA-205ENST00000507536 POGKQ9P215 609 aa15.22■□□□□ 0.03
PDGFRA-205ENST00000507536 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
PDGFRA-205ENST00000507536 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
PDGFRA-205ENST00000507536 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.03
PDGFRA-205ENST00000507536 NUBP1P53384 320 aa15.2■□□□□ 0.02
PDGFRA-205ENST00000507536 EIF3AQ14152 1382 aaKnown RBP15.2■□□□□ 0.02
PDGFRA-205ENST00000507536 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
PDGFRA-205ENST00000507536 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
PDGFRA-205ENST00000507536 NRKQ7Z2Y5 1582 aa15.19■□□□□ 0.02
PDGFRA-205ENST00000507536 WASLO00401 505 aaPredicted RBP15.18■□□□□ 0.02
PDGFRA-205ENST00000507536 DEFB132Q7Z7B7 95 aa15.18■□□□□ 0.02
PDGFRA-205ENST00000507536 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
PDGFRA-205ENST00000507536 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
PDGFRA-205ENST00000507536 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
PDGFRA-205ENST00000507536 QRICH2Q9H0J4 1663 aa15.17■□□□□ 0.02
PDGFRA-205ENST00000507536 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
PDGFRA-205ENST00000507536 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
PDGFRA-205ENST00000507536 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
PDGFRA-205ENST00000507536 BTG4Q9NY30 223 aa15.15■□□□□ 0.02
PDGFRA-205ENST00000507536 RREB1Q92766 1687 aa15.14■□□□□ 0.01
PDGFRA-205ENST00000507536 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
PDGFRA-205ENST00000507536 POLR3AO14802 1390 aaPredicted RBP15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 HRCP23327 699 aa15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 FAM98CQ17RN3 349 aaKnown RBP15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
PDGFRA-205ENST00000507536 WNK3Q9BYP7 1800 aa15.12■□□□□ 0.01
PDGFRA-205ENST00000507536 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 CLCN6P51797 869 aa15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 NUDT16Q96DE0 195 aaKnown RBP15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms