RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
TRIM6-209ENST00000507320 TRPM3Q9HCF6 1732 aaPredicted RBP14.7□□□□□ -0.06
TRIM6-209ENST00000507320 PER1O15534 1290 aaPredicted RBP14.69□□□□□ -0.06
TRIM6-209ENST00000507320 SOS2Q07890 1332 aaPredicted RBP14.69□□□□□ -0.06
TRIM6-209ENST00000507320 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
TRIM6-209ENST00000507320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIM6-209ENST00000507320 PHLPP1O60346 1717 aa14.67□□□□□ -0.06
TRIM6-209ENST00000507320 TTC21BQ7Z4L5 1316 aa14.67□□□□□ -0.06
TRIM6-209ENST00000507320 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
TRIM6-209ENST00000507320 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
TRIM6-209ENST00000507320 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
TRIM6-209ENST00000507320 PIK3C2AO00443 1686 aa14.65□□□□□ -0.06
TRIM6-209ENST00000507320 MSH5O43196 834 aa14.65□□□□□ -0.06
TRIM6-209ENST00000507320 NME9Q86XW9 330 aa14.65□□□□□ -0.06
TRIM6-209ENST00000507320 SBNO1A3KN83 1393 aa14.64□□□□□ -0.07
TRIM6-209ENST00000507320 SPATA31A3Q5VYP0 1347 aa14.64□□□□□ -0.07
TRIM6-209ENST00000507320 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
TRIM6-209ENST00000507320 KNSTRNQ9Y448 316 aa14.64□□□□□ -0.07
TRIM6-209ENST00000507320 TNS3Q68CZ2 1445 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 BRD4O60885 1362 aaPredicted RBP14.63□□□□□ -0.07
TRIM6-209ENST00000507320 FYB1O15117 783 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 HSPA1LP34931 641 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
TRIM6-209ENST00000507320 NUTM2GQ5VZR2 741 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 TTC21AQ8NDW8 1320 aa14.63□□□□□ -0.07
TRIM6-209ENST00000507320 LMOD2Q6P5Q4 547 aa14.62□□□□□ -0.07
TRIM6-209ENST00000507320 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
TRIM6-209ENST00000507320 GGNBP2Q9H3C7 697 aa14.62□□□□□ -0.07
TRIM6-209ENST00000507320 CGNL1Q0VF96 1302 aa14.62□□□□□ -0.07
TRIM6-209ENST00000507320 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
TRIM6-209ENST00000507320 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
TRIM6-209ENST00000507320 MARF1Q9Y4F3 1742 aaKnown RBP14.62□□□□□ -0.07
TRIM6-209ENST00000507320 LRRC59Q96AG4 307 aaKnown RBP14.61□□□□□ -0.07
TRIM6-209ENST00000507320 CC2D1BQ5T0F9 858 aaKnown RBP14.6□□□□□ -0.07
TRIM6-209ENST00000507320 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
TRIM6-209ENST00000507320 NLRP6P59044 892 aa14.6□□□□□ -0.07
TRIM6-209ENST00000507320 OVOS2A0A0J9YW53 1432 aa14.59□□□□□ -0.07
TRIM6-209ENST00000507320 OVOS2Q6IE36 1432 aa14.59□□□□□ -0.07
TRIM6-209ENST00000507320 CABLES1Q8TDN4 633 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 ARHGEF10O15013 1369 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 USP31Q70CQ4 1352 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 MED1Q15648 1581 aaPredicted RBP14.58□□□□□ -0.08
TRIM6-209ENST00000507320 USP54Q70EL1 1684 aa14.58□□□□□ -0.08
TRIM6-209ENST00000507320 CRYBG1Q9Y4K1 1723 aa14.57□□□□□ -0.08
TRIM6-209ENST00000507320 NPC1L1Q9UHC9 1359 aa14.57□□□□□ -0.08
TRIM6-209ENST00000507320 NSD2O96028 1365 aa14.56□□□□□ -0.08
TRIM6-209ENST00000507320 FBLN1P23142 703 aa14.56□□□□□ -0.08
TRIM6-209ENST00000507320 NLRP13Q86W25 1043 aa14.56□□□□□ -0.08
TRIM6-209ENST00000507320 COG3Q96JB2 828 aa14.56□□□□□ -0.08
TRIM6-209ENST00000507320 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
TRIM6-209ENST00000507320 COL22A1Q8NFW1 1626 aaPredicted RBP14.55□□□□□ -0.08
TRIM6-209ENST00000507320 USP19O94966 1318 aa14.55□□□□□ -0.08
TRIM6-209ENST00000507320 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
TRIM6-209ENST00000507320 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
TRIM6-209ENST00000507320 SOX12O15370 315 aa14.55□□□□□ -0.08
TRIM6-209ENST00000507320 JCADQ9P266 1359 aa14.54□□□□□ -0.08
TRIM6-209ENST00000507320 SLIT3O75094 1523 aa14.54□□□□□ -0.08
TRIM6-209ENST00000507320 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
TRIM6-209ENST00000507320 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
TRIM6-209ENST00000507320 MORC1Q86VD1 984 aa14.53□□□□□ -0.08
TRIM6-209ENST00000507320 GCP02774 474 aa14.52□□□□□ -0.08
TRIM6-209ENST00000507320 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
TRIM6-209ENST00000507320 NFAT5O94916 1531 aa14.52□□□□□ -0.09
TRIM6-209ENST00000507320 PRKRIP1Q9H875 184 aaPredicted RBP14.51□□□□□ -0.09
TRIM6-209ENST00000507320 MAP2P11137 1827 aaKnown RBP14.5□□□□□ -0.09
TRIM6-209ENST00000507320 ZC3H6P61129 1189 aaKnown RBP14.5□□□□□ -0.09
TRIM6-209ENST00000507320 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
TRIM6-209ENST00000507320 NUTM2BA6NNL0 878 aaPredicted RBP14.49□□□□□ -0.09
TRIM6-209ENST00000507320 NUTM2EB1AL46 878 aaPredicted RBP14.49□□□□□ -0.09
TRIM6-209ENST00000507320 NUTM2AQ8IVF1 878 aaPredicted RBP14.49□□□□□ -0.09
TRIM6-209ENST00000507320 KCNH5Q8NCM2 988 aa14.49□□□□□ -0.09
TRIM6-209ENST00000507320 LTN1O94822 1766 aa14.48□□□□□ -0.09
TRIM6-209ENST00000507320 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
TRIM6-209ENST00000507320 LRP6O75581 1613 aa14.48□□□□□ -0.09
TRIM6-209ENST00000507320 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
TRIM6-209ENST00000507320 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 AATKQ6ZMQ8 1374 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 MAP3K19Q56UN5 1328 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 SPATA31A6Q5VVP1 1343 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 ANP32CO43423 234 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 ADAMTS2O95450 1211 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 RALBP1Q15311 655 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 POLKQ9UBT6 870 aa14.47□□□□□ -0.09
TRIM6-209ENST00000507320 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
TRIM6-209ENST00000507320 PPP2R1AP30153 589 aa14.46□□□□□ -0.09
TRIM6-209ENST00000507320 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
TRIM6-209ENST00000507320 CHRNA2Q15822 529 aa14.45□□□□□ -0.1
TRIM6-209ENST00000507320 CPDO75976 1380 aa14.45□□□□□ -0.1
TRIM6-209ENST00000507320 PPM1GO15355 546 aaPredicted RBP14.44□□□□□ -0.1
TRIM6-209ENST00000507320 MTHFSP49914 203 aa14.44□□□□□ -0.1
TRIM6-209ENST00000507320 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
TRIM6-209ENST00000507320 COL18A1P39060 1754 aa14.44□□□□□ -0.1
TRIM6-209ENST00000507320 MYBBP1AQ9BQG0 1328 aaKnown RBP14.43□□□□□ -0.1
TRIM6-209ENST00000507320 RGPD5Q99666 1765 aa14.43□□□□□ -0.1
TRIM6-209ENST00000507320 FAM83GA6ND36 823 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms