RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 AKAP12Q02952 1782 aa27.83■■■□□ 2.05
DDR1-259ENST00000507046 PLEKHG5O94827 1062 aa27.82■■■□□ 2.04
DDR1-259ENST00000507046 EIF4G2P78344 907 aaKnown RBP eCLIP27.82■■■□□ 2.04
DDR1-259ENST00000507046 ZNF692Q9BU19 519 aaPredicted RBP27.82■■■□□ 2.04
DDR1-259ENST00000507046 RGS17Q9UGC6 210 aaPredicted RBP27.82■■■□□ 2.04
DDR1-259ENST00000507046 ZNF772Q68DY9 489 aaPredicted RBP27.81■■■□□ 2.04
DDR1-259ENST00000507046 TMC1Q8TDI8 760 aa27.81■■■□□ 2.04
DDR1-259ENST00000507046 NINLQ9Y2I6 1382 aa27.81■■■□□ 2.04
DDR1-259ENST00000507046 CDCA8Q53HL2 280 aa27.8■■■□□ 2.04
DDR1-259ENST00000507046 CABLES1Q8TDN4 633 aa27.8■■■□□ 2.04
DDR1-259ENST00000507046 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
DDR1-259ENST00000507046 AFF2P51816 1311 aa27.8■■■□□ 2.04
DDR1-259ENST00000507046 CPSF1Q10570 1443 aaKnown RBP27.79■■■□□ 2.04
DDR1-259ENST00000507046 ABTB2Q8N961 1025 aa27.78■■■□□ 2.04
DDR1-259ENST00000507046 KTN1Q86UP2 1357 aaKnown RBP27.77■■■□□ 2.04
DDR1-259ENST00000507046 MON2Q7Z3U7 1717 aa27.77■■■□□ 2.04
DDR1-259ENST00000507046 CRYBG1Q9Y4K1 1723 aa27.77■■■□□ 2.04
DDR1-259ENST00000507046 HDGFL2Q7Z4V5 671 aaPredicted RBP27.76■■■□□ 2.03
DDR1-259ENST00000507046 NRKQ7Z2Y5 1582 aa27.76■■■□□ 2.03
DDR1-259ENST00000507046 SSH2Q76I76 1423 aa27.75■■■□□ 2.03
DDR1-259ENST00000507046 HSPA5P11021 654 aaKnown RBP27.75■■■□□ 2.03
DDR1-259ENST00000507046 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
DDR1-259ENST00000507046 NUTM2GQ5VZR2 741 aa27.74■■■□□ 2.03
DDR1-259ENST00000507046 SLC12A5Q9H2X9 1139 aa27.74■■■□□ 2.03
DDR1-259ENST00000507046 CD163L1Q9NR16 1453 aa27.74■■■□□ 2.03
DDR1-259ENST00000507046 PHRF1Q9P1Y6 1649 aaKnown RBP27.74■■■□□ 2.03
DDR1-259ENST00000507046 ILDR2Q71H61 639 aa27.73■■■□□ 2.03
DDR1-259ENST00000507046 TTC21AQ8NDW8 1320 aa27.72■■■□□ 2.03
DDR1-259ENST00000507046 POTEAQ6S8J7 498 aa27.72■■■□□ 2.03
DDR1-259ENST00000507046 TTC21BQ7Z4L5 1316 aa27.71■■■□□ 2.03
DDR1-259ENST00000507046 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
DDR1-259ENST00000507046 A0A1W2PP64 1363 aa27.71■■■□□ 2.03
DDR1-259ENST00000507046 FNBP4Q8N3X1 1017 aaPredicted RBP27.7■■■□□ 2.02
DDR1-259ENST00000507046 USP21Q9UK80 565 aa27.7■■■□□ 2.02
DDR1-259ENST00000507046 PIK3C2AO00443 1686 aa27.7■■■□□ 2.02
DDR1-259ENST00000507046 USP19O94966 1318 aa27.68■■■□□ 2.02
DDR1-259ENST00000507046 EDC4Q6P2E9 1401 aaKnown RBP27.67■■■□□ 2.02
DDR1-259ENST00000507046 NLRP6P59044 892 aa27.67■■■□□ 2.02
DDR1-259ENST00000507046 PLCH1Q4KWH8 1693 aa27.67■■■□□ 2.02
DDR1-259ENST00000507046 SLIT2O94813 1529 aa27.67■■■□□ 2.02
DDR1-259ENST00000507046 ANKRD36BQ8N2N9 1353 aa27.66■■■□□ 2.02
DDR1-259ENST00000507046 COL14A1Q05707 1796 aaKnown RBP27.65■■■□□ 2.02
DDR1-259ENST00000507046 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.64■■■□□ 2.02
DDR1-259ENST00000507046 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.01
DDR1-259ENST00000507046 BCL9LQ86UU0 1499 aa27.64■■■□□ 2.01
DDR1-259ENST00000507046 MYOM1P52179 1685 aa27.63■■■□□ 2.01
DDR1-259ENST00000507046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.63■■■□□ 2.01
DDR1-259ENST00000507046 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
DDR1-259ENST00000507046 PRDM11Q9NQV5 511 aa27.63■■■□□ 2.01
DDR1-259ENST00000507046 TRPC5Q9UL62 973 aaPredicted RBP27.63■■■□□ 2.01
DDR1-259ENST00000507046 SLIT3O75094 1523 aa27.62■■■□□ 2.01
DDR1-259ENST00000507046 KIAA0232Q92628 1395 aa27.61■■■□□ 2.01
DDR1-259ENST00000507046 ATRNO75882 1429 aa27.6■■■□□ 2.01
DDR1-259ENST00000507046 FAM83GA6ND36 823 aa27.6■■■□□ 2.01
DDR1-259ENST00000507046 RXRBP28702 533 aa27.6■■■□□ 2.01
DDR1-259ENST00000507046 UNC5CLQ8IV45 518 aa27.6■■■□□ 2.01
DDR1-259ENST00000507046 POLR3GLQ9BT43 218 aa27.6■■■□□ 2.01
DDR1-259ENST00000507046 GCP02774 474 aa27.59■■■□□ 2.01
DDR1-259ENST00000507046 ZC3H6P61129 1189 aaKnown RBP27.58■■■□□ 2.01
DDR1-259ENST00000507046 USP54Q70EL1 1684 aa27.58■■■□□ 2.01
DDR1-259ENST00000507046 CPDO75976 1380 aa27.58■■■□□ 2.01
DDR1-259ENST00000507046 RBM6P78332 1123 aaKnown RBP27.57■■■□□ 2
DDR1-259ENST00000507046 USP31Q70CQ4 1352 aa27.57■■■□□ 2
DDR1-259ENST00000507046 NME9Q86XW9 330 aa27.56■■■□□ 2
DDR1-259ENST00000507046 NRAPQ86VF7 1730 aa27.55■■■□□ 2
DDR1-259ENST00000507046 KCNH5Q8NCM2 988 aa27.55■■■□□ 2
DDR1-259ENST00000507046 BTG4Q9NY30 223 aa27.55■■■□□ 2
DDR1-259ENST00000507046 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
DDR1-259ENST00000507046 CHRNA2Q15822 529 aa27.53■■■□□ 2
DDR1-259ENST00000507046 OVOS2A0A0J9YW53 1432 aa27.5■■□□□ 1.99
DDR1-259ENST00000507046 OVOS2Q6IE36 1432 aa27.5■■□□□ 1.99
DDR1-259ENST00000507046 VPS72Q15906 364 aa27.5■■□□□ 1.99
DDR1-259ENST00000507046 ZRANB1Q9UGI0 708 aa27.5■■□□□ 1.99
DDR1-259ENST00000507046 ZBTB7CA1YPR0 619 aa27.49■■□□□ 1.99
DDR1-259ENST00000507046 SOX12O15370 315 aa27.49■■□□□ 1.99
DDR1-259ENST00000507046 GJD4Q96KN9 370 aaPredicted RBP27.49■■□□□ 1.99
DDR1-259ENST00000507046 CCDC9Q9Y3X0 531 aaKnown RBP27.49■■□□□ 1.99
DDR1-259ENST00000507046 NFAT5O94916 1531 aa27.49■■□□□ 1.99
DDR1-259ENST00000507046 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
DDR1-259ENST00000507046 NSD3Q9BZ95 1437 aa27.48■■□□□ 1.99
DDR1-259ENST00000507046 COG3Q96JB2 828 aa27.47■■□□□ 1.99
DDR1-259ENST00000507046 RGS12O14924 1447 aa27.47■■□□□ 1.99
DDR1-259ENST00000507046 KIF20BQ96Q89 1820 aa27.46■■□□□ 1.99
DDR1-259ENST00000507046 GLI3P10071 1580 aa27.46■■□□□ 1.99
DDR1-259ENST00000507046 AATKQ6ZMQ8 1374 aa27.46■■□□□ 1.99
DDR1-259ENST00000507046 C11orf95C9JLR9 678 aaPredicted RBP27.45■■□□□ 1.98
DDR1-259ENST00000507046 SOCS7O14512 581 aa27.44■■□□□ 1.98
DDR1-259ENST00000507046 KIF7Q2M1P5 1343 aa27.43■■□□□ 1.98
DDR1-259ENST00000507046 CAMTA1Q9Y6Y1 1673 aa27.43■■□□□ 1.98
DDR1-259ENST00000507046 ARHGEF25Q86VW2 580 aa27.43■■□□□ 1.98
DDR1-259ENST00000507046 STRN4Q9NRL3 753 aa27.43■■□□□ 1.98
DDR1-259ENST00000507046 ABCC6O95255 1503 aa27.42■■□□□ 1.98
DDR1-259ENST00000507046 EVA1CP58658 441 aa27.42■■□□□ 1.98
DDR1-259ENST00000507046 CARD14Q9BXL6 1004 aa27.42■■□□□ 1.98
DDR1-259ENST00000507046 COL5A2P05997 1499 aaPredicted RBP27.4■■□□□ 1.98
DDR1-259ENST00000507046 FYB1O15117 783 aa27.4■■□□□ 1.98
DDR1-259ENST00000507046 CGNL1Q0VF96 1302 aa27.4■■□□□ 1.98
DDR1-259ENST00000507046 GGNBP2Q9H3C7 697 aa27.39■■□□□ 1.98
DDR1-259ENST00000507046 LTN1O94822 1766 aa27.39■■□□□ 1.98
DDR1-259ENST00000507046 COL18A1P39060 1754 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms