RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 USP5P45974 858 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 NASPP49321 788 aaPredicted RBP3.06□□□□□ -1.92
ITGA1-204ENST00000506275 KIF27Q86VH2 1401 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 SETD5Q9C0A6 1442 aa3.06□□□□□ -1.92
ITGA1-204ENST00000506275 ZBTB22O15209 634 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 DIAPH1O60610 1272 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 PTCD1O75127 700 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 REC8O95072 547 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CENPQQ7L2Z9 268 aaPredicted RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 TANGO6Q9C0B7 1094 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 DIDO1Q9BTC0 2240 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 TNNT1P13805 278 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 HSP90B2PQ58FF3 399 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 FILIP1Q7Z7B0 1213 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC47Q96A33 483 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 PRDM10Q9NQV6 1147 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 MTHFSP49914 203 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 DDX11Q96FC9 970 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 IL1RAPL2Q9NP60 686 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CNNM1Q9NRU3 951 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 ABCF2Q9UG63 623 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 MAP1BP46821 2468 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 UBTFL1P0CB47 393 aaPredicted RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 MATR3P43243 847 aaKnown RBP eCLIP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 GUCY1B3Q02153 619 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 ESCO1Q5FWF5 840 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 TEX35Q5T0J7 233 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 HDAC5Q9UQL6 1122 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CARMIL1Q5VZK9 1371 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CT47B1P0C2W7 299 aaPredicted RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 ATF3P18847 181 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 ISM2Q6H9L7 571 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CDK5RAP3Q96JB5 506 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CUX2O14529 1486 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 BCAR3O75815 825 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 DDX58O95786 925 aaKnown RBP3.05□□□□□ -1.92
ITGA1-204ENST00000506275 RNF20Q5VTR2 975 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 CHMP4AQ9BY43 222 aa3.05□□□□□ -1.92
ITGA1-204ENST00000506275 FERMT3Q86UX7 667 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 PRKRIP1Q9H875 184 aaPredicted RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 MACROD2A1Z1Q3 448 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 SERPINC1P01008 464 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 LIG1P18858 919 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ME1P48163 572 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ZC3H6P61129 1189 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 KLHL10Q6JEL2 608 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 TRAK2O60296 914 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ABCB7O75027 752 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CAMK4Q16566 473 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 NOM1Q5C9Z4 860 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 OLFM4Q6UX06 510 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CLASRPQ8N2M8 674 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC113Q9H0I3 377 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 DEF6Q9H4E7 631 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ADAMTS8Q9UP79 889 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ZNF644Q9H582 1327 aaPredicted RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 KINO60870 393 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 PPARDQ03181 441 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 SYCP1Q15431 976 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 SEPT7Q16181 437 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC181Q5TID7 509 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 PUS7Q96PZ0 661 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 SLC26A8Q96RN1 970 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CHMP5Q9NZZ3 219 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 HOOK1Q9UJC3 728 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 SDK1Q7Z5N4 2213 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 ABCC8Q09428 1581 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 EEA1Q15075 1411 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 RP1L1Q8IWN7 2480 aaPredicted RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 GOLGA6L10A0A0M3HER8 536 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 GOLGA6L10A6NI86 522 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 MPHOSPH10O00566 681 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CAPN15O75808 1086 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC173Q0VFZ6 552 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 INTS3Q68E01 1043 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 CWC27Q6UX04 472 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 THUMPD2Q9BTF0 503 aaKnown RBP3.04□□□□□ -1.92
ITGA1-204ENST00000506275 DDX19BQ9UMR2 479 aa3.04□□□□□ -1.92
ITGA1-204ENST00000506275 DCTN1Q14203 1278 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 RRS1Q15050 365 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 LRRFIP1Q32MZ4 808 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 RAB11FIP4Q86YS3 637 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 JARID2Q92833 1246 aaPredicted RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 MYO10Q9HD67 2058 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 SETD1BQ9UPS6 1966 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 TERF1P54274 439 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 HSP90AA4PQ58FG1 418 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 TXNDC2Q86VQ3 553 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 RSPH6AQ9H0K4 717 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 EVC2Q86UK5 1308 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 MINDY4BA8MYZ0 360 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 SLC4A2P04920 1241 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 SULT6B1Q6IMI4 303 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 TOM1L2Q6ZVM7 507 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 CCDC191Q8NCU4 936 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 DRC1Q96MC2 740 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 MYBBP1AQ9BQG0 1328 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 FAM170AA1A519 330 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 IDH1O75874 414 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 STK38Q15208 465 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms