RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 NUTM2GQ5VZR2 741 aa25.13■■□□□ 1.61
SMN1-204ENST00000506163 FNBP4Q8N3X1 1017 aaPredicted RBP25.13■■□□□ 1.61
SMN1-204ENST00000506163 USP6P35125 1406 aa25.12■■□□□ 1.61
SMN1-204ENST00000506163 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
SMN1-204ENST00000506163 ABCA3Q99758 1704 aa25.12■■□□□ 1.61
SMN1-204ENST00000506163 SLC12A5Q9H2X9 1139 aa25.12■■□□□ 1.61
SMN1-204ENST00000506163 CPSF1Q10570 1443 aaKnown RBP25.11■■□□□ 1.61
SMN1-204ENST00000506163 MARF1Q9Y4F3 1742 aaKnown RBP25.11■■□□□ 1.61
SMN1-204ENST00000506163 PUS7Q96PZ0 661 aaKnown RBP25.11■■□□□ 1.61
SMN1-204ENST00000506163 CD163L1Q9NR16 1453 aa25.09■■□□□ 1.61
SMN1-204ENST00000506163 ABTB2Q8N961 1025 aa25.09■■□□□ 1.61
SMN1-204ENST00000506163 CRYBG1Q9Y4K1 1723 aa25.08■■□□□ 1.61
SMN1-204ENST00000506163 FAM83GA6ND36 823 aa25.08■■□□□ 1.61
SMN1-204ENST00000506163 USP21Q9UK80 565 aa25.08■■□□□ 1.61
SMN1-204ENST00000506163 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
SMN1-204ENST00000506163 HAP1P54257 671 aaPredicted RBP25.07■■□□□ 1.6
SMN1-204ENST00000506163 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
SMN1-204ENST00000506163 QTRT2Q9H974 415 aaKnown RBP25.07■■□□□ 1.6
SMN1-204ENST00000506163 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
SMN1-204ENST00000506163 AKAP12Q02952 1782 aa25.06■■□□□ 1.6
SMN1-204ENST00000506163 BRD4O60885 1362 aaPredicted RBP25.06■■□□□ 1.6
SMN1-204ENST00000506163 TMF1P82094 1093 aa25.04■■□□□ 1.6
SMN1-204ENST00000506163 SLIT2O94813 1529 aa25.04■■□□□ 1.6
SMN1-204ENST00000506163 TTC21BQ7Z4L5 1316 aa25.04■■□□□ 1.6
SMN1-204ENST00000506163 SLC24A1O60721 1099 aa25.03■■□□□ 1.6
SMN1-204ENST00000506163 KTN1Q86UP2 1357 aaKnown RBP25.02■■□□□ 1.6
SMN1-204ENST00000506163 USP19O94966 1318 aa25.02■■□□□ 1.6
SMN1-204ENST00000506163 HSPA5P11021 654 aaKnown RBP25.02■■□□□ 1.6
SMN1-204ENST00000506163 RXRBP28702 533 aa25.01■■□□□ 1.59
SMN1-204ENST00000506163 ATRNO75882 1429 aa25■■□□□ 1.59
SMN1-204ENST00000506163 SOCS7O14512 581 aa25■■□□□ 1.59
SMN1-204ENST00000506163 NLRP13Q86W25 1043 aa25■■□□□ 1.59
SMN1-204ENST00000506163 PHRF1Q9P1Y6 1649 aaKnown RBP24.99■■□□□ 1.59
SMN1-204ENST00000506163 NLRP6P59044 892 aa24.99■■□□□ 1.59
SMN1-204ENST00000506163 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
SMN1-204ENST00000506163 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
SMN1-204ENST00000506163 TRPC5Q9UL62 973 aaPredicted RBP24.99■■□□□ 1.59
SMN1-204ENST00000506163 A0A1W2PP64 1363 aa24.99■■□□□ 1.59
SMN1-204ENST00000506163 NRKQ7Z2Y5 1582 aa24.99■■□□□ 1.59
SMN1-204ENST00000506163 PIK3C2AO00443 1686 aa24.99■■□□□ 1.59
SMN1-204ENST00000506163 ZC3H6P61129 1189 aaKnown RBP24.98■■□□□ 1.59
SMN1-204ENST00000506163 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
SMN1-204ENST00000506163 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
SMN1-204ENST00000506163 KIAA0232Q92628 1395 aa24.97■■□□□ 1.59
SMN1-204ENST00000506163 GCP02774 474 aa24.96■■□□□ 1.59
SMN1-204ENST00000506163 RBM6P78332 1123 aaKnown RBP24.96■■□□□ 1.59
SMN1-204ENST00000506163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.59
SMN1-204ENST00000506163 TTC21AQ8NDW8 1320 aa24.96■■□□□ 1.59
SMN1-204ENST00000506163 CHRNA2Q15822 529 aa24.95■■□□□ 1.59
SMN1-204ENST00000506163 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.59
SMN1-204ENST00000506163 PLCH1Q4KWH8 1693 aa24.95■■□□□ 1.58
SMN1-204ENST00000506163 PRDM11Q9NQV5 511 aa24.95■■□□□ 1.58
SMN1-204ENST00000506163 BTG4Q9NY30 223 aa24.95■■□□□ 1.58
SMN1-204ENST00000506163 TERF2IPQ9NYB0 399 aa24.95■■□□□ 1.58
SMN1-204ENST00000506163 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
SMN1-204ENST00000506163 NME9Q86XW9 330 aa24.94■■□□□ 1.58
SMN1-204ENST00000506163 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.93■■□□□ 1.58
SMN1-204ENST00000506163 GJD4Q96KN9 370 aaPredicted RBP24.92■■□□□ 1.58
SMN1-204ENST00000506163 SLIT3O75094 1523 aa24.92■■□□□ 1.58
SMN1-204ENST00000506163 COL14A1Q05707 1796 aaKnown RBP24.92■■□□□ 1.58
SMN1-204ENST00000506163 C11orf95C9JLR9 678 aaPredicted RBP24.91■■□□□ 1.58
SMN1-204ENST00000506163 CDCA8Q53HL2 280 aa24.91■■□□□ 1.58
SMN1-204ENST00000506163 NWD2Q9ULI1 1742 aa24.91■■□□□ 1.58
SMN1-204ENST00000506163 EDC4Q6P2E9 1401 aaKnown RBP24.91■■□□□ 1.58
SMN1-204ENST00000506163 CPDO75976 1380 aa24.9■■□□□ 1.58
SMN1-204ENST00000506163 VPS72Q15906 364 aa24.89■■□□□ 1.58
SMN1-204ENST00000506163 ANKRD36BQ8N2N9 1353 aa24.89■■□□□ 1.58
SMN1-204ENST00000506163 RGS12O14924 1447 aa24.89■■□□□ 1.57
SMN1-204ENST00000506163 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
SMN1-204ENST00000506163 USP31Q70CQ4 1352 aa24.88■■□□□ 1.57
SMN1-204ENST00000506163 NRAPQ86VF7 1730 aa24.88■■□□□ 1.57
SMN1-204ENST00000506163 GLI3P10071 1580 aa24.87■■□□□ 1.57
SMN1-204ENST00000506163 MYOM1P52179 1685 aa24.86■■□□□ 1.57
SMN1-204ENST00000506163 CARD14Q9BXL6 1004 aa24.86■■□□□ 1.57
SMN1-204ENST00000506163 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
SMN1-204ENST00000506163 SOX12O15370 315 aa24.85■■□□□ 1.57
SMN1-204ENST00000506163 ARHGEF25Q86VW2 580 aa24.83■■□□□ 1.57
SMN1-204ENST00000506163 LMO7Q8WWI1 1683 aa24.82■■□□□ 1.56
SMN1-204ENST00000506163 NFAT5O94916 1531 aa24.82■■□□□ 1.56
SMN1-204ENST00000506163 POLR3GLQ9BT43 218 aa24.82■■□□□ 1.56
SMN1-204ENST00000506163 USP54Q70EL1 1684 aa24.81■■□□□ 1.56
SMN1-204ENST00000506163 ZBTB7CA1YPR0 619 aa24.81■■□□□ 1.56
SMN1-204ENST00000506163 KCNH5Q8NCM2 988 aa24.81■■□□□ 1.56
SMN1-204ENST00000506163 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
SMN1-204ENST00000506163 AXIN2Q9Y2T1 843 aa24.81■■□□□ 1.56
SMN1-204ENST00000506163 CCDC9Q9Y3X0 531 aaKnown RBP24.81■■□□□ 1.56
SMN1-204ENST00000506163 OVOS2A0A0J9YW53 1432 aa24.8■■□□□ 1.56
SMN1-204ENST00000506163 OVOS2Q6IE36 1432 aa24.8■■□□□ 1.56
SMN1-204ENST00000506163 SPATA31A5Q5VU36 1347 aa24.8■■□□□ 1.56
SMN1-204ENST00000506163 SPATA31A7Q8IWB4 1347 aa24.8■■□□□ 1.56
SMN1-204ENST00000506163 COL18A1P39060 1754 aa24.8■■□□□ 1.56
SMN1-204ENST00000506163 FYB1O15117 783 aa24.79■■□□□ 1.56
SMN1-204ENST00000506163 AATKQ6ZMQ8 1374 aa24.79■■□□□ 1.56
SMN1-204ENST00000506163 ONECUT3O60422 494 aaPredicted RBP24.78■■□□□ 1.56
SMN1-204ENST00000506163 FBLN1P23142 703 aa24.77■■□□□ 1.56
SMN1-204ENST00000506163 LARP1Q6PKG0 1096 aaKnown RBP24.77■■□□□ 1.56
SMN1-204ENST00000506163 GGNBP2Q9H3C7 697 aa24.76■■□□□ 1.55
SMN1-204ENST00000506163 COL5A2P05997 1499 aaPredicted RBP24.75■■□□□ 1.55
SMN1-204ENST00000506163 EVA1CP58658 441 aa24.75■■□□□ 1.55
SMN1-204ENST00000506163 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms