RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 KIAA1210Q9ULL0 1709 aa5.57□□□□□ -1.52
TCOF1-208ENST00000506063 ALS2Q96Q42 1657 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 PAPPAQ13219 1627 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 YBX3P16989 372 aaKnown RBP eCLIP5.56□□□□□ -1.52
TCOF1-208ENST00000506063 APLP1P51693 650 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 GPR162Q16538 588 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 ESCO1Q5FWF5 840 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 CCDC144AA2RUR9 1427 aa5.56□□□□□ -1.52
TCOF1-208ENST00000506063 SPATA31A1Q5TZJ5 1347 aa5.55□□□□□ -1.52
TCOF1-208ENST00000506063 ARHGEF28Q8N1W1 1705 aaKnown RBP5.55□□□□□ -1.52
TCOF1-208ENST00000506063 MTFR1LQ9H019 292 aa5.55□□□□□ -1.52
TCOF1-208ENST00000506063 RRP7BPQ9NSQ0 103 aa5.55□□□□□ -1.52
TCOF1-208ENST00000506063 BTG4Q9NY30 223 aa5.55□□□□□ -1.52
TCOF1-208ENST00000506063 LRPPRCP42704 1394 aaKnown RBP5.55□□□□□ -1.52
TCOF1-208ENST00000506063 QSER1Q2KHR3 1735 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 TUBGCP6Q96RT7 1819 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 PLSCR1O15162 318 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 PTF1AQ7RTS3 328 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 KLRG1Q96E93 195 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 ARXQ96QS3 562 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 GPBP1L1Q9HC44 474 aaPredicted RBP5.54□□□□□ -1.52
TCOF1-208ENST00000506063 WWC3Q9ULE0 1092 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 HFM1A2PYH4 1435 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 TECPR2O15040 1411 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 MYOM3Q5VTT5 1437 aa5.54□□□□□ -1.52
TCOF1-208ENST00000506063 CHGAP10645 457 aaKnown RBP5.53□□□□□ -1.52
TCOF1-208ENST00000506063 HTRA3P83110 453 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 NLGN2Q8NFZ4 835 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 NAIPQ13075 1403 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 IFT172Q9UG01 1749 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 TNRC18O15417 2968 aaPredicted RBP5.53□□□□□ -1.52
TCOF1-208ENST00000506063 SBNO1A3KN83 1393 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 TOPAZ1Q8N9V7 1692 aa5.53□□□□□ -1.52
TCOF1-208ENST00000506063 PHRF1Q9P1Y6 1649 aaKnown RBP5.52□□□□□ -1.53
TCOF1-208ENST00000506063 PDE4DIPQ5VU43 2346 aa5.52□□□□□ -1.53
TCOF1-208ENST00000506063 KRT28Q7Z3Y7 464 aa5.52□□□□□ -1.53
TCOF1-208ENST00000506063 AATKQ6ZMQ8 1374 aa5.52□□□□□ -1.53
TCOF1-208ENST00000506063 LRRC37A3O60309 1634 aa5.52□□□□□ -1.53
TCOF1-208ENST00000506063 NRXN1Q9ULB1 1477 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 DAPK1P53355 1430 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 SLC15A2Q16348 729 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 FAM161AQ3B820 660 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 ZNF526Q8TF50 670 aaPredicted RBP5.51□□□□□ -1.53
TCOF1-208ENST00000506063 ATP7BP35670 1465 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 WNK3Q9BYP7 1800 aa5.51□□□□□ -1.53
TCOF1-208ENST00000506063 BARGINQ6ZT62 677 aa5.5□□□□□ -1.53
TCOF1-208ENST00000506063 KNDC1Q76NI1 1749 aa5.5□□□□□ -1.53
TCOF1-208ENST00000506063 ARHGEF10O15013 1369 aa5.5□□□□□ -1.53
TCOF1-208ENST00000506063 LMO7Q8WWI1 1683 aa5.5□□□□□ -1.53
TCOF1-208ENST00000506063 AKAP12Q02952 1782 aa5.5□□□□□ -1.53
TCOF1-208ENST00000506063 TULP4Q9NRJ4 1543 aa5.49□□□□□ -1.53
TCOF1-208ENST00000506063 NUTM2FA1L443 756 aa5.49□□□□□ -1.53
TCOF1-208ENST00000506063 PLEKHG5O94827 1062 aa5.49□□□□□ -1.53
TCOF1-208ENST00000506063 HAP1P54257 671 aaPredicted RBP5.49□□□□□ -1.53
TCOF1-208ENST00000506063 CLTCL1P53675 1640 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 GRIN3BO60391 1043 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 HSPA1AP0DMV8 641 aaKnown RBP5.48□□□□□ -1.53
TCOF1-208ENST00000506063 HSPA1BP0DMV9 641 aaKnown RBP5.48□□□□□ -1.53
TCOF1-208ENST00000506063 PELP1Q8IZL8 1130 aaKnown RBP5.48□□□□□ -1.53
TCOF1-208ENST00000506063 BCL11BQ9C0K0 894 aaPredicted RBP5.48□□□□□ -1.53
TCOF1-208ENST00000506063 CICQ96RK0 1608 aaPredicted RBP5.48□□□□□ -1.53
TCOF1-208ENST00000506063 OVOS2A0A0G2JMS6 1433 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 OVOS2A0A0J9YW53 1432 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 BCL9O00512 1426 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 OVOS2Q6IE36 1432 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 SSH2Q76I76 1423 aa5.48□□□□□ -1.53
TCOF1-208ENST00000506063 PPLO60437 1756 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 DHX57Q6P158 1386 aaKnown RBP5.47□□□□□ -1.53
TCOF1-208ENST00000506063 PLEKHH1Q9ULM0 1364 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 TOMM70O94826 608 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 PDE3BQ13370 1112 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 TXNRD1Q16881 649 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 STK32BQ9NY57 414 aa5.47□□□□□ -1.53
TCOF1-208ENST00000506063 KIF1BO60333 1816 aa5.46□□□□□ -1.53
TCOF1-208ENST00000506063 ANKRD30AQ9BXX3 1397 aa5.46□□□□□ -1.54
TCOF1-208ENST00000506063 ZNF827Q17R98 1081 aa5.46□□□□□ -1.54
TCOF1-208ENST00000506063 ANKRD50Q9ULJ7 1429 aa5.46□□□□□ -1.54
TCOF1-208ENST00000506063 KIAA0232Q92628 1395 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 NHSQ6T4R5 1651 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 QRICH2Q9H0J4 1663 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 RGS19P49795 217 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 WAPLQ7Z5K2 1190 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 PHF8Q9UPP1 1060 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 BTAF1O14981 1849 aa5.45□□□□□ -1.54
TCOF1-208ENST00000506063 PSME1Q06323 249 aa5.44□□□□□ -1.54
TCOF1-208ENST00000506063 CHRNA2Q15822 529 aa5.44□□□□□ -1.54
TCOF1-208ENST00000506063 LARP1Q6PKG0 1096 aaKnown RBP5.44□□□□□ -1.54
TCOF1-208ENST00000506063 TCP11L2Q8N4U5 519 aa5.44□□□□□ -1.54
TCOF1-208ENST00000506063 USP35Q9P2H5 1018 aa5.44□□□□□ -1.54
TCOF1-208ENST00000506063 C11orf95C9JLR9 678 aaPredicted RBP5.43□□□□□ -1.54
TCOF1-208ENST00000506063 LMOD2Q6P5Q4 547 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 KLHL34Q8N239 644 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 RBM46Q8TBY0 533 aaKnown RBP5.43□□□□□ -1.54
TCOF1-208ENST00000506063 NMRK2Q9NPI5 230 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 PRDM11Q9NQV5 511 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 STRN4Q9NRL3 753 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 CHIC2Q9UKJ5 165 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 KIAA1551Q9HCM1 1747 aa5.43□□□□□ -1.54
TCOF1-208ENST00000506063 MARCH10Q8NA82 808 aaPredicted RBP5.42□□□□□ -1.54
TCOF1-208ENST00000506063 PNPLA7Q6ZV29 1317 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms