RNA–Protein interactions for RNA: ENST00000505552.1

ITGA3-205, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-205ENST00000505552 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
ITGA3-205ENST00000505552 KNSTRNQ9Y448 316 aa7.73□□□□□ -1.17
ITGA3-205ENST00000505552 COL3A1P02461 1466 aaPredicted RBP7.73□□□□□ -1.17
ITGA3-205ENST00000505552 PIK3C2AO00443 1686 aa7.73□□□□□ -1.17
ITGA3-205ENST00000505552 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
ITGA3-205ENST00000505552 DCCP43146 1447 aa7.72□□□□□ -1.17
ITGA3-205ENST00000505552 C1orf167Q5SNV9 1468 aa7.72□□□□□ -1.17
ITGA3-205ENST00000505552 ACEP12821 1306 aa7.72□□□□□ -1.17
ITGA3-205ENST00000505552 ZNF335Q9H4Z2 1342 aaPredicted RBP7.72□□□□□ -1.17
ITGA3-205ENST00000505552 OVOS2A0A0J9YW53 1432 aa7.71□□□□□ -1.17
ITGA3-205ENST00000505552 OVOS2Q6IE36 1432 aa7.71□□□□□ -1.17
ITGA3-205ENST00000505552 SMG6Q86US8 1419 aaKnown RBP7.71□□□□□ -1.17
ITGA3-205ENST00000505552 NCBP3Q53F19 620 aaKnown RBP7.71□□□□□ -1.18
ITGA3-205ENST00000505552 NLRP13Q86W25 1043 aa7.71□□□□□ -1.18
ITGA3-205ENST00000505552 TERF2IPQ9NYB0 399 aa7.71□□□□□ -1.18
ITGA3-205ENST00000505552 ZRANB1Q9UGI0 708 aa7.71□□□□□ -1.18
ITGA3-205ENST00000505552 CGNL1Q0VF96 1302 aa7.71□□□□□ -1.18
ITGA3-205ENST00000505552 USP31Q70CQ4 1352 aa7.71□□□□□ -1.18
ITGA3-205ENST00000505552 NUTM2FA1L443 756 aa7.7□□□□□ -1.18
ITGA3-205ENST00000505552 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
ITGA3-205ENST00000505552 TTC21BQ7Z4L5 1316 aa7.7□□□□□ -1.18
ITGA3-205ENST00000505552 INSRP06213 1382 aa7.7□□□□□ -1.18
ITGA3-205ENST00000505552 PNPLA6Q8IY17 1366 aa7.7□□□□□ -1.18
ITGA3-205ENST00000505552 HDGFL2Q7Z4V5 671 aaPredicted RBP7.69□□□□□ -1.18
ITGA3-205ENST00000505552 NME9Q86XW9 330 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
ITGA3-205ENST00000505552 GGNBP2Q9H3C7 697 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 KIF1AQ12756 1690 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 PEAK1Q9H792 1746 aa7.69□□□□□ -1.18
ITGA3-205ENST00000505552 BLMP54132 1417 aaPredicted RBP7.69□□□□□ -1.18
ITGA3-205ENST00000505552 ALS2Q96Q42 1657 aa7.68□□□□□ -1.18
ITGA3-205ENST00000505552 CNGB1Q14028 1251 aaPredicted RBP7.68□□□□□ -1.18
ITGA3-205ENST00000505552 PMFBP1Q8TBY8 1022 aa7.68□□□□□ -1.18
ITGA3-205ENST00000505552 ORAI2Q96SN7 254 aa7.68□□□□□ -1.18
ITGA3-205ENST00000505552 MAP2P11137 1827 aaKnown RBP7.68□□□□□ -1.18
ITGA3-205ENST00000505552 AATKQ6ZMQ8 1374 aa7.68□□□□□ -1.18
ITGA3-205ENST00000505552 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
ITGA3-205ENST00000505552 FBLN1P23142 703 aa7.67□□□□□ -1.18
ITGA3-205ENST00000505552 PHF8Q9UPP1 1060 aa7.67□□□□□ -1.18
ITGA3-205ENST00000505552 PXDNQ92626 1479 aa7.67□□□□□ -1.18
ITGA3-205ENST00000505552 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
ITGA3-205ENST00000505552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.66□□□□□ -1.18
ITGA3-205ENST00000505552 POLKQ9UBT6 870 aa7.66□□□□□ -1.18
ITGA3-205ENST00000505552 TTC21AQ8NDW8 1320 aa7.66□□□□□ -1.18
ITGA3-205ENST00000505552 NFAT5O94916 1531 aa7.66□□□□□ -1.18
ITGA3-205ENST00000505552 SLIT3O75094 1523 aa7.65□□□□□ -1.18
ITGA3-205ENST00000505552 RGPD1P0DJD0 1748 aa7.65□□□□□ -1.18
ITGA3-205ENST00000505552 MTHFSP49914 203 aa7.65□□□□□ -1.18
ITGA3-205ENST00000505552 PHRF1Q9P1Y6 1649 aaKnown RBP7.65□□□□□ -1.18
ITGA3-205ENST00000505552 NHSL1Q5SYE7 1610 aa7.64□□□□□ -1.19
ITGA3-205ENST00000505552 MED1Q15648 1581 aaPredicted RBP7.64□□□□□ -1.19
ITGA3-205ENST00000505552 CDK12Q9NYV4 1490 aaPredicted RBP7.64□□□□□ -1.19
ITGA3-205ENST00000505552 YTHDC1Q96MU7 727 aaKnown RBP7.64□□□□□ -1.19
ITGA3-205ENST00000505552 ADAMTS8Q9UP79 889 aa7.64□□□□□ -1.19
ITGA3-205ENST00000505552 IQSEC2Q5JU85 1478 aa7.63□□□□□ -1.19
ITGA3-205ENST00000505552 MSH6P52701 1360 aa7.63□□□□□ -1.19
ITGA3-205ENST00000505552 USP19O94966 1318 aa7.63□□□□□ -1.19
ITGA3-205ENST00000505552 ESCO1Q5FWF5 840 aa7.63□□□□□ -1.19
ITGA3-205ENST00000505552 FAM9BQ8IZU0 186 aa7.63□□□□□ -1.19
ITGA3-205ENST00000505552 CENPBP07199 599 aaPredicted RBP7.62□□□□□ -1.19
ITGA3-205ENST00000505552 TNNT2P45379 298 aaPredicted RBP7.62□□□□□ -1.19
ITGA3-205ENST00000505552 BRINP3Q76B58 766 aa7.62□□□□□ -1.19
ITGA3-205ENST00000505552 CADPS2Q86UW7 1296 aa7.62□□□□□ -1.19
ITGA3-205ENST00000505552 NGDNQ8NEJ9 315 aaKnown RBP7.62□□□□□ -1.19
ITGA3-205ENST00000505552 EMILIN1Q9Y6C2 1016 aa7.62□□□□□ -1.19
ITGA3-205ENST00000505552 COL18A1P39060 1754 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 SBNO1A3KN83 1393 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
ITGA3-205ENST00000505552 ZNF521Q96K83 1311 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 FOXO3O43524 673 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 C14orf37Q86TY3 774 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 DDX17Q92841 729 aaKnown RBP7.61□□□□□ -1.19
ITGA3-205ENST00000505552 COG3Q96JB2 828 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 LTN1O94822 1766 aa7.61□□□□□ -1.19
ITGA3-205ENST00000505552 MAP3K19Q56UN5 1328 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 ZBED9Q6R2W3 1325 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 DCAF8L1A6NGE4 600 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 ATF3P18847 181 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 IL13P35225 146 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 RRS1Q15050 365 aaKnown RBP7.6□□□□□ -1.19
ITGA3-205ENST00000505552 PLEKHF1Q96S99 279 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
ITGA3-205ENST00000505552 AHDC1Q5TGY3 1603 aaPredicted RBP7.6□□□□□ -1.19
ITGA3-205ENST00000505552 HNRNPUQ00839 825 aaKnown RBP eCLIP7.59□□□□□ -1.19
ITGA3-205ENST00000505552 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.19
ITGA3-205ENST00000505552 KRT28Q7Z3Y7 464 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 LMO7Q8WWI1 1683 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 ROBO1Q9Y6N7 1651 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 CAMTA1Q9Y6Y1 1673 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 NCAPD2Q15021 1401 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 TNS3Q68CZ2 1445 aa7.59□□□□□ -1.19
ITGA3-205ENST00000505552 SPATA31A3Q5VYP0 1347 aa7.58□□□□□ -1.2
ITGA3-205ENST00000505552 KIF24Q5T7B8 1368 aa7.58□□□□□ -1.2
ITGA3-205ENST00000505552 NLRP6P59044 892 aa7.57□□□□□ -1.2
ITGA3-205ENST00000505552 PSME1Q06323 249 aa7.57□□□□□ -1.2
ITGA3-205ENST00000505552 EIF4A2Q14240 407 aaKnown RBP7.57□□□□□ -1.2
ITGA3-205ENST00000505552 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms