RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.04
NFKB1-205ENST00000505458 TNNT2P45379 298 aaPredicted RBP14.77□□□□□ -0.04
NFKB1-205ENST00000505458 WWC1Q8IX03 1113 aa14.77□□□□□ -0.04
NFKB1-205ENST00000505458 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.04
NFKB1-205ENST00000505458 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.04
NFKB1-205ENST00000505458 XRN1Q8IZH2 1706 aaKnown RBP14.77□□□□□ -0.04
NFKB1-205ENST00000505458 AAMPQ13685 434 aa14.77□□□□□ -0.05
NFKB1-205ENST00000505458 NEFMP07197 916 aa14.76□□□□□ -0.05
NFKB1-205ENST00000505458 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
NFKB1-205ENST00000505458 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.05
NFKB1-205ENST00000505458 TCP11L2Q8N4U5 519 aa14.76□□□□□ -0.05
NFKB1-205ENST00000505458 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
NFKB1-205ENST00000505458 DIAPH1O60610 1272 aaKnown RBP14.76□□□□□ -0.05
NFKB1-205ENST00000505458 IL16Q14005 1332 aa14.76□□□□□ -0.05
NFKB1-205ENST00000505458 ROBO2Q9HCK4 1378 aa14.76□□□□□ -0.05
NFKB1-205ENST00000505458 NRKQ7Z2Y5 1582 aa14.75□□□□□ -0.05
NFKB1-205ENST00000505458 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
NFKB1-205ENST00000505458 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-205ENST00000505458 PLEKHG3A1L390 1219 aa14.74□□□□□ -0.05
NFKB1-205ENST00000505458 LTKP29376 864 aa14.74□□□□□ -0.05
NFKB1-205ENST00000505458 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
NFKB1-205ENST00000505458 ADAMTSL3P82987 1691 aa14.73□□□□□ -0.05
NFKB1-205ENST00000505458 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
NFKB1-205ENST00000505458 FCHSD2O94868 740 aa14.73□□□□□ -0.05
NFKB1-205ENST00000505458 COG3Q96JB2 828 aa14.73□□□□□ -0.05
NFKB1-205ENST00000505458 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
NFKB1-205ENST00000505458 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
NFKB1-205ENST00000505458 EXOC6Q8TAG9 804 aa14.72□□□□□ -0.05
NFKB1-205ENST00000505458 PDE3AQ14432 1141 aa14.72□□□□□ -0.05
NFKB1-205ENST00000505458 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.05
NFKB1-205ENST00000505458 CALD1Q05682 793 aaKnown RBP14.71□□□□□ -0.05
NFKB1-205ENST00000505458 RBM19Q9Y4C8 960 aaKnown RBP14.71□□□□□ -0.05
NFKB1-205ENST00000505458 NALCNQ8IZF0 1738 aa14.71□□□□□ -0.06
NFKB1-205ENST00000505458 MS4A1P11836 297 aa14.7□□□□□ -0.06
NFKB1-205ENST00000505458 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
NFKB1-205ENST00000505458 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
NFKB1-205ENST00000505458 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
NFKB1-205ENST00000505458 TCERG1O14776 1098 aaKnown RBP14.69□□□□□ -0.06
NFKB1-205ENST00000505458 U2SURPO15042 1029 aaKnown RBP14.69□□□□□ -0.06
NFKB1-205ENST00000505458 USP6P35125 1406 aa14.69□□□□□ -0.06
NFKB1-205ENST00000505458 PLEKHF1Q96S99 279 aa14.69□□□□□ -0.06
NFKB1-205ENST00000505458 AMOTL2Q9Y2J4 779 aa14.68□□□□□ -0.06
NFKB1-205ENST00000505458 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
NFKB1-205ENST00000505458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.68□□□□□ -0.06
NFKB1-205ENST00000505458 POLKQ9UBT6 870 aa14.68□□□□□ -0.06
NFKB1-205ENST00000505458 CRBNQ96SW2 442 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 TMPOP42166 694 aaKnown RBP14.67□□□□□ -0.06
NFKB1-205ENST00000505458 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 PRR36Q9H6K5 1346 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 OVOS2A0A0J9YW53 1432 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 OVOS2Q6IE36 1432 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 USP54Q70EL1 1684 aa14.67□□□□□ -0.06
NFKB1-205ENST00000505458 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
NFKB1-205ENST00000505458 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
NFKB1-205ENST00000505458 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-205ENST00000505458 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
NFKB1-205ENST00000505458 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
NFKB1-205ENST00000505458 CHD2O14647 1828 aaKnown RBP14.65□□□□□ -0.06
NFKB1-205ENST00000505458 USP31Q70CQ4 1352 aa14.65□□□□□ -0.06
NFKB1-205ENST00000505458 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
NFKB1-205ENST00000505458 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
NFKB1-205ENST00000505458 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
NFKB1-205ENST00000505458 KIF24Q5T7B8 1368 aa14.64□□□□□ -0.07
NFKB1-205ENST00000505458 SLC26A8Q96RN1 970 aa14.64□□□□□ -0.07
NFKB1-205ENST00000505458 ACEP12821 1306 aa14.63□□□□□ -0.07
NFKB1-205ENST00000505458 NME9Q86XW9 330 aa14.63□□□□□ -0.07
NFKB1-205ENST00000505458 PLIN1O60240 522 aa14.63□□□□□ -0.07
NFKB1-205ENST00000505458 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
NFKB1-205ENST00000505458 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
NFKB1-205ENST00000505458 RRP7AQ9Y3A4 280 aaKnown RBP14.62□□□□□ -0.07
NFKB1-205ENST00000505458 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
NFKB1-205ENST00000505458 IL13P35225 146 aa14.61□□□□□ -0.07
NFKB1-205ENST00000505458 NFE2L2Q16236 605 aa14.61□□□□□ -0.07
NFKB1-205ENST00000505458 RIPK4P57078 832 aa14.6□□□□□ -0.07
NFKB1-205ENST00000505458 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
NFKB1-205ENST00000505458 TRIM35Q9UPQ4 493 aa14.59□□□□□ -0.07
NFKB1-205ENST00000505458 KDM2BQ8NHM5 1336 aa14.59□□□□□ -0.07
NFKB1-205ENST00000505458 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.07
NFKB1-205ENST00000505458 PRKAR2BP31323 418 aa14.58□□□□□ -0.08
NFKB1-205ENST00000505458 NWD1Q149M9 1564 aa14.58□□□□□ -0.08
NFKB1-205ENST00000505458 KIF16BQ96L93 1317 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 ARHGEF10O15013 1369 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
NFKB1-205ENST00000505458 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 RGPD1P0DJD0 1748 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
NFKB1-205ENST00000505458 BCAR3O75815 825 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 GNAI1P63096 354 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
NFKB1-205ENST00000505458 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-205ENST00000505458 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 IPO8O15397 1037 aaKnown RBP14.56□□□□□ -0.08
NFKB1-205ENST00000505458 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 CHMP4BQ9H444 224 aaKnown RBP14.56□□□□□ -0.08
NFKB1-205ENST00000505458 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 ZKSCAN2Q63HK3 967 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 FLT4P35916 1363 aa14.56□□□□□ -0.08
NFKB1-205ENST00000505458 PMFBP1Q8TBY8 1022 aa14.55□□□□□ -0.08
NFKB1-205ENST00000505458 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms