RNA–Protein interactions for RNA: ENST00000505368.1

RAB5CP2-201, Transcript of RAB5C, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB5CP2, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP2-201ENST00000505368 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
RAB5CP2-201ENST00000505368 KIAA0232Q92628 1395 aa13.45□□□□□ -0.26
RAB5CP2-201ENST00000505368 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
RAB5CP2-201ENST00000505368 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
RAB5CP2-201ENST00000505368 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
RAB5CP2-201ENST00000505368 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
RAB5CP2-201ENST00000505368 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
RAB5CP2-201ENST00000505368 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
RAB5CP2-201ENST00000505368 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
RAB5CP2-201ENST00000505368 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
RAB5CP2-201ENST00000505368 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
RAB5CP2-201ENST00000505368 KIAA1210Q9ULL0 1709 aa13.43□□□□□ -0.26
RAB5CP2-201ENST00000505368 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
RAB5CP2-201ENST00000505368 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
RAB5CP2-201ENST00000505368 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
RAB5CP2-201ENST00000505368 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
RAB5CP2-201ENST00000505368 USP19O94966 1318 aa13.41□□□□□ -0.26
RAB5CP2-201ENST00000505368 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
RAB5CP2-201ENST00000505368 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
RAB5CP2-201ENST00000505368 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
RAB5CP2-201ENST00000505368 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
RAB5CP2-201ENST00000505368 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 USP6P35125 1406 aa13.39□□□□□ -0.27
RAB5CP2-201ENST00000505368 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
RAB5CP2-201ENST00000505368 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
RAB5CP2-201ENST00000505368 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
RAB5CP2-201ENST00000505368 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
RAB5CP2-201ENST00000505368 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
RAB5CP2-201ENST00000505368 CARD11Q9BXL7 1154 aa13.36□□□□□ -0.27
RAB5CP2-201ENST00000505368 SPATA31A1Q5TZJ5 1347 aa13.36□□□□□ -0.27
RAB5CP2-201ENST00000505368 EVC2Q86UK5 1308 aa13.36□□□□□ -0.27
RAB5CP2-201ENST00000505368 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
RAB5CP2-201ENST00000505368 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
RAB5CP2-201ENST00000505368 GCP02774 474 aa13.35□□□□□ -0.27
RAB5CP2-201ENST00000505368 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
RAB5CP2-201ENST00000505368 CPDO75976 1380 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 A0A0G2JS52 829 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 MYT1Q01538 1121 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 CD163L1Q9NR16 1453 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
RAB5CP2-201ENST00000505368 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
RAB5CP2-201ENST00000505368 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
RAB5CP2-201ENST00000505368 USP35Q9P2H5 1018 aa13.33□□□□□ -0.28
RAB5CP2-201ENST00000505368 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 ZBTB7CA1YPR0 619 aa13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 NLRP6P59044 892 aa13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 TESK2Q96S53 571 aa13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 NWD2Q9ULI1 1742 aa13.32□□□□□ -0.28
RAB5CP2-201ENST00000505368 SLIT3O75094 1523 aa13.31□□□□□ -0.28
RAB5CP2-201ENST00000505368 SOX12O15370 315 aa13.31□□□□□ -0.28
RAB5CP2-201ENST00000505368 NLRP13Q86W25 1043 aa13.31□□□□□ -0.28
RAB5CP2-201ENST00000505368 SBNO2Q9Y2G9 1366 aa13.31□□□□□ -0.28
RAB5CP2-201ENST00000505368 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
RAB5CP2-201ENST00000505368 NME9Q86XW9 330 aa13.3□□□□□ -0.28
RAB5CP2-201ENST00000505368 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
RAB5CP2-201ENST00000505368 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
RAB5CP2-201ENST00000505368 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
RAB5CP2-201ENST00000505368 LMO7Q8WWI1 1683 aa13.29□□□□□ -0.28
RAB5CP2-201ENST00000505368 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
RAB5CP2-201ENST00000505368 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
RAB5CP2-201ENST00000505368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB5CP2-201ENST00000505368 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.29
RAB5CP2-201ENST00000505368 EVA1CP58658 441 aa13.26□□□□□ -0.29
RAB5CP2-201ENST00000505368 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
RAB5CP2-201ENST00000505368 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
RAB5CP2-201ENST00000505368 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
RAB5CP2-201ENST00000505368 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
RAB5CP2-201ENST00000505368 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
RAB5CP2-201ENST00000505368 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
RAB5CP2-201ENST00000505368 NFAT5O94916 1531 aa13.24□□□□□ -0.29
RAB5CP2-201ENST00000505368 TRIM37O94972 964 aa13.24□□□□□ -0.29
RAB5CP2-201ENST00000505368 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
RAB5CP2-201ENST00000505368 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
RAB5CP2-201ENST00000505368 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
RAB5CP2-201ENST00000505368 FBLN1P23142 703 aa13.23□□□□□ -0.29
RAB5CP2-201ENST00000505368 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
RAB5CP2-201ENST00000505368 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
RAB5CP2-201ENST00000505368 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
RAB5CP2-201ENST00000505368 CRB1P82279 1406 aa13.22□□□□□ -0.29
RAB5CP2-201ENST00000505368 USP47Q96K76 1375 aa13.21□□□□□ -0.29
RAB5CP2-201ENST00000505368 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.29
RAB5CP2-201ENST00000505368 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
RAB5CP2-201ENST00000505368 OVOS2A0A0J9YW53 1432 aa13.21□□□□□ -0.3
RAB5CP2-201ENST00000505368 OVOS2Q6IE36 1432 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms