RNA–Protein interactions for RNA: ENST00000505341.1

C15orf40-203, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 2

Gene C15orf40, Length 1,881 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-203ENST00000505341 ZBED9Q6R2W3 1325 aa27.59■■■□□ 2.01
C15orf40-203ENST00000505341 BLMP54132 1417 aaPredicted RBP27.59■■■□□ 2.01
C15orf40-203ENST00000505341 ZRANB1Q9UGI0 708 aa27.59■■■□□ 2.01
C15orf40-203ENST00000505341 WDR43Q15061 677 aaKnown RBP eCLIP27.58■■■□□ 2.01
C15orf40-203ENST00000505341 ADAMTS8Q9UP79 889 aa27.58■■■□□ 2.01
C15orf40-203ENST00000505341 C19orf44Q9H6X5 657 aa27.57■■■□□ 2
C15orf40-203ENST00000505341 NCOA3Q9Y6Q9 1424 aa27.57■■■□□ 2
C15orf40-203ENST00000505341 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
C15orf40-203ENST00000505341 PHF8Q9UPP1 1060 aa27.55■■■□□ 2
C15orf40-203ENST00000505341 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
C15orf40-203ENST00000505341 COG3Q96JB2 828 aa27.55■■■□□ 2
C15orf40-203ENST00000505341 OVOS2A0A0J9YW53 1432 aa27.53■■■□□ 2
C15orf40-203ENST00000505341 OVOS2Q6IE36 1432 aa27.53■■■□□ 2
C15orf40-203ENST00000505341 MAP2P11137 1827 aaKnown RBP27.53■■■□□ 2
C15orf40-203ENST00000505341 TTC21AQ8NDW8 1320 aa27.53■■■□□ 2
C15orf40-203ENST00000505341 CFAP53Q96M91 514 aa27.53■■■□□ 2
C15orf40-203ENST00000505341 ESCO1Q5FWF5 840 aa27.52■■■□□ 2
C15orf40-203ENST00000505341 DCCP43146 1447 aa27.52■■■□□ 2
C15orf40-203ENST00000505341 ZNF335Q9H4Z2 1342 aaPredicted RBP27.52■■■□□ 2
C15orf40-203ENST00000505341 SENP3-EIF4A1A0A087X0R7 540 aa27.51■■□□□ 1.99
C15orf40-203ENST00000505341 PIK3C2AO00443 1686 aa27.51■■□□□ 1.99
C15orf40-203ENST00000505341 COL3A1P02461 1466 aaPredicted RBP27.5■■□□□ 1.99
C15orf40-203ENST00000505341 FBLN1P23142 703 aa27.5■■□□□ 1.99
C15orf40-203ENST00000505341 C1orf167Q5SNV9 1468 aa27.49■■□□□ 1.99
C15orf40-203ENST00000505341 LRRC7Q96NW7 1537 aa27.49■■□□□ 1.99
C15orf40-203ENST00000505341 AATKQ6ZMQ8 1374 aa27.49■■□□□ 1.99
C15orf40-203ENST00000505341 ORAI2Q96SN7 254 aa27.48■■□□□ 1.99
C15orf40-203ENST00000505341 POLKQ9UBT6 870 aa27.47■■□□□ 1.99
C15orf40-203ENST00000505341 MST1RQ04912 1400 aa27.47■■□□□ 1.99
C15orf40-203ENST00000505341 ATF3P18847 181 aa27.46■■□□□ 1.99
C15orf40-203ENST00000505341 SMG6Q86US8 1419 aaKnown RBP27.46■■□□□ 1.99
C15orf40-203ENST00000505341 KIF1AQ12756 1690 aa27.45■■□□□ 1.99
C15orf40-203ENST00000505341 PNPLA6Q8IY17 1366 aa27.45■■□□□ 1.99
C15orf40-203ENST00000505341 DMRT2Q9Y5R5 561 aa27.44■■□□□ 1.98
C15orf40-203ENST00000505341 MSH6P52701 1360 aa27.44■■□□□ 1.98
C15orf40-203ENST00000505341 USP31Q70CQ4 1352 aa27.44■■□□□ 1.98
C15orf40-203ENST00000505341 USP54Q70EL1 1684 aa27.44■■□□□ 1.98
C15orf40-203ENST00000505341 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
C15orf40-203ENST00000505341 EMILIN1Q9Y6C2 1016 aa27.42■■□□□ 1.98
C15orf40-203ENST00000505341 CDK12Q9NYV4 1490 aaPredicted RBP27.41■■□□□ 1.98
C15orf40-203ENST00000505341 CADPS2Q86UW7 1296 aa27.4■■□□□ 1.98
C15orf40-203ENST00000505341 PPM1GO15355 546 aaPredicted RBP27.4■■□□□ 1.98
C15orf40-203ENST00000505341 CCDC146Q8IYE0 955 aa27.4■■□□□ 1.98
C15orf40-203ENST00000505341 PSME1Q06323 249 aa27.39■■□□□ 1.98
C15orf40-203ENST00000505341 RRS1Q15050 365 aaKnown RBP27.39■■□□□ 1.98
C15orf40-203ENST00000505341 PAK3O75914 559 aaPredicted RBP27.38■■□□□ 1.97
C15orf40-203ENST00000505341 FOXO3O43524 673 aa27.38■■□□□ 1.97
C15orf40-203ENST00000505341 SALL2Q9Y467 1007 aaPredicted RBP27.38■■□□□ 1.97
C15orf40-203ENST00000505341 NLRP6P59044 892 aa27.36■■□□□ 1.97
C15orf40-203ENST00000505341 ABTB2Q8N961 1025 aa27.36■■□□□ 1.97
C15orf40-203ENST00000505341 TRPM3Q9HCF6 1732 aaPredicted RBP27.36■■□□□ 1.97
C15orf40-203ENST00000505341 DIAPH1O60610 1272 aaKnown RBP27.36■■□□□ 1.97
C15orf40-203ENST00000505341 NUDCQ9Y266 331 aa27.35■■□□□ 1.97
C15orf40-203ENST00000505341 NUTM2GQ5VZR2 741 aa27.34■■□□□ 1.97
C15orf40-203ENST00000505341 PEAK1Q9H792 1746 aa27.34■■□□□ 1.97
C15orf40-203ENST00000505341 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
C15orf40-203ENST00000505341 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
C15orf40-203ENST00000505341 XPCQ01831 940 aaPredicted RBP27.32■■□□□ 1.96
C15orf40-203ENST00000505341 U2SURPO15042 1029 aaKnown RBP27.32■■□□□ 1.96
C15orf40-203ENST00000505341 SOX12O15370 315 aa27.32■■□□□ 1.96
C15orf40-203ENST00000505341 APAF1O14727 1248 aa27.3■■□□□ 1.96
C15orf40-203ENST00000505341 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
C15orf40-203ENST00000505341 KRT28Q7Z3Y7 464 aa27.29■■□□□ 1.96
C15orf40-203ENST00000505341 RUNDC1Q96C34 613 aa27.29■■□□□ 1.96
C15orf40-203ENST00000505341 IQSEC2Q5JU85 1478 aa27.28■■□□□ 1.96
C15orf40-203ENST00000505341 MAP3K19Q56UN5 1328 aa27.27■■□□□ 1.96
C15orf40-203ENST00000505341 IL13P35225 146 aa27.26■■□□□ 1.95
C15orf40-203ENST00000505341 ALS2Q96Q42 1657 aa27.25■■□□□ 1.95
C15orf40-203ENST00000505341 PDE3BQ13370 1112 aa27.25■■□□□ 1.95
C15orf40-203ENST00000505341 DDX17Q92841 729 aaKnown RBP27.23■■□□□ 1.95
C15orf40-203ENST00000505341 ZNF521Q96K83 1311 aa27.23■■□□□ 1.95
C15orf40-203ENST00000505341 SBNO1A3KN83 1393 aa27.23■■□□□ 1.95
C15orf40-203ENST00000505341 NFAT5O94916 1531 aa27.23■■□□□ 1.95
C15orf40-203ENST00000505341 LTN1O94822 1766 aa27.22■■□□□ 1.95
C15orf40-203ENST00000505341 FLT4P35916 1363 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 NPHP3Q7Z494 1330 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 BRINP3Q76B58 766 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 PLEKHF1Q96S99 279 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 SLAIN2Q9P270 581 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 HSP90AB2PQ58FF8 381 aa27.21■■□□□ 1.95
C15orf40-203ENST00000505341 PXDNQ92626 1479 aa27.2■■□□□ 1.95
C15orf40-203ENST00000505341 NGEFQ8N5V2 710 aa27.2■■□□□ 1.94
C15orf40-203ENST00000505341 CDCA7LQ96GN5 454 aa27.2■■□□□ 1.94
C15orf40-203ENST00000505341 LTBP4Q8N2S1 1624 aa27.2■■□□□ 1.94
C15orf40-203ENST00000505341 SLIT3O75094 1523 aa27.2■■□□□ 1.94
C15orf40-203ENST00000505341 EIF4A2Q14240 407 aaKnown RBP27.19■■□□□ 1.94
C15orf40-203ENST00000505341 LMOD2Q6P5Q4 547 aa27.18■■□□□ 1.94
C15orf40-203ENST00000505341 KIF24Q5T7B8 1368 aa27.18■■□□□ 1.94
C15orf40-203ENST00000505341 RGPD1P0DJD0 1748 aa27.18■■□□□ 1.94
C15orf40-203ENST00000505341 FCHSD2O94868 740 aa27.17■■□□□ 1.94
C15orf40-203ENST00000505341 AMPHP49418 695 aa27.17■■□□□ 1.94
C15orf40-203ENST00000505341 RSPH6AQ9H0K4 717 aa27.17■■□□□ 1.94
C15orf40-203ENST00000505341 RRP7AQ9Y3A4 280 aaKnown RBP27.17■■□□□ 1.94
C15orf40-203ENST00000505341 USP19O94966 1318 aa27.16■■□□□ 1.94
C15orf40-203ENST00000505341 HMOX1P09601 288 aa27.15■■□□□ 1.94
C15orf40-203ENST00000505341 KCNH5Q8NCM2 988 aa27.15■■□□□ 1.94
C15orf40-203ENST00000505341 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
C15orf40-203ENST00000505341 NEUROD2Q15784 382 aa27.14■■□□□ 1.94
C15orf40-203ENST00000505341 TNS3Q68CZ2 1445 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms