RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
UBE2D3-220ENST00000505307 PLEKHG3A1L390 1219 aa28.78■■■□□ 2.2
UBE2D3-220ENST00000505307 BTG4Q9NY30 223 aa28.77■■■□□ 2.2
UBE2D3-220ENST00000505307 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
UBE2D3-220ENST00000505307 L3MBTL2Q969R5 705 aa28.76■■■□□ 2.19
UBE2D3-220ENST00000505307 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
UBE2D3-220ENST00000505307 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
UBE2D3-220ENST00000505307 ACEP12821 1306 aa28.74■■■□□ 2.19
UBE2D3-220ENST00000505307 EP400Q96L91 3159 aa28.73■■■□□ 2.19
UBE2D3-220ENST00000505307 PRDM11Q9NQV5 511 aa28.72■■■□□ 2.19
UBE2D3-220ENST00000505307 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
UBE2D3-220ENST00000505307 SRPK2P78362 688 aaKnown RBP28.71■■■□□ 2.19
UBE2D3-220ENST00000505307 BLMP54132 1417 aaPredicted RBP28.7■■■□□ 2.19
UBE2D3-220ENST00000505307 NRAPQ86VF7 1730 aa28.69■■■□□ 2.18
UBE2D3-220ENST00000505307 CRYBG1Q9Y4K1 1723 aa28.69■■■□□ 2.18
UBE2D3-220ENST00000505307 KRT27Q7Z3Y8 459 aa28.69■■■□□ 2.18
UBE2D3-220ENST00000505307 SIN3AQ96ST3 1273 aa28.67■■■□□ 2.18
UBE2D3-220ENST00000505307 ZRANB1Q9UGI0 708 aa28.67■■■□□ 2.18
UBE2D3-220ENST00000505307 BRWD3Q6RI45 1802 aa28.66■■■□□ 2.18
UBE2D3-220ENST00000505307 BRD4O60885 1362 aaPredicted RBP28.66■■■□□ 2.18
UBE2D3-220ENST00000505307 SPATA31A5Q5VU36 1347 aa28.66■■■□□ 2.18
UBE2D3-220ENST00000505307 SPATA31A7Q8IWB4 1347 aa28.66■■■□□ 2.18
UBE2D3-220ENST00000505307 A0A0G2JS52 829 aa28.65■■■□□ 2.18
UBE2D3-220ENST00000505307 MYT1Q01538 1121 aa28.65■■■□□ 2.18
UBE2D3-220ENST00000505307 SF3B2Q13435 895 aaKnown RBP28.65■■■□□ 2.18
UBE2D3-220ENST00000505307 FAM98CQ17RN3 349 aaKnown RBP28.65■■■□□ 2.18
UBE2D3-220ENST00000505307 KIAA0232Q92628 1395 aa28.64■■■□□ 2.18
UBE2D3-220ENST00000505307 PPIP5K1Q6PFW1 1433 aa28.64■■■□□ 2.18
UBE2D3-220ENST00000505307 ABTB2Q8N961 1025 aa28.64■■■□□ 2.18
UBE2D3-220ENST00000505307 NEUROD1Q13562 356 aa28.63■■■□□ 2.17
UBE2D3-220ENST00000505307 CABP2Q9NPB3 220 aa28.63■■■□□ 2.17
UBE2D3-220ENST00000505307 NUTM2GQ5VZR2 741 aa28.62■■■□□ 2.17
UBE2D3-220ENST00000505307 QRICH2Q9H0J4 1663 aa28.61■■■□□ 2.17
UBE2D3-220ENST00000505307 ZC3H6P61129 1189 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-220ENST00000505307 NLRP13Q86W25 1043 aa28.6■■■□□ 2.17
UBE2D3-220ENST00000505307 PHRF1Q9P1Y6 1649 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-220ENST00000505307 EVC2Q86UK5 1308 aa28.6■■■□□ 2.17
UBE2D3-220ENST00000505307 ROCK2O75116 1388 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-220ENST00000505307 TRPM1Q7Z4N2 1603 aa28.58■■■□□ 2.17
UBE2D3-220ENST00000505307 CHRNA2Q15822 529 aa28.58■■■□□ 2.17
UBE2D3-220ENST00000505307 USP19O94966 1318 aa28.58■■■□□ 2.17
UBE2D3-220ENST00000505307 CABP1Q9NZU7 370 aa28.57■■■□□ 2.16
UBE2D3-220ENST00000505307 CPDO75976 1380 aa28.57■■■□□ 2.16
UBE2D3-220ENST00000505307 SPATA31A1Q5TZJ5 1347 aa28.56■■■□□ 2.16
UBE2D3-220ENST00000505307 STRN4Q9NRL3 753 aa28.54■■■□□ 2.16
UBE2D3-220ENST00000505307 EVA1CP58658 441 aa28.53■■■□□ 2.16
UBE2D3-220ENST00000505307 USP6P35125 1406 aa28.52■■■□□ 2.16
UBE2D3-220ENST00000505307 SRCAPQ6ZRS2 3230 aa28.52■■■□□ 2.16
UBE2D3-220ENST00000505307 GCP02774 474 aa28.52■■■□□ 2.16
UBE2D3-220ENST00000505307 DEFB132Q7Z7B7 95 aa28.52■■■□□ 2.16
UBE2D3-220ENST00000505307 NRKQ7Z2Y5 1582 aa28.51■■■□□ 2.15
UBE2D3-220ENST00000505307 BAG6P46379 1132 aa28.5■■■□□ 2.15
UBE2D3-220ENST00000505307 ZNF692Q9BU19 519 aaPredicted RBP28.5■■■□□ 2.15
UBE2D3-220ENST00000505307 THSD7AQ9UPZ6 1657 aa28.5■■■□□ 2.15
UBE2D3-220ENST00000505307 SSH2Q76I76 1423 aa28.49■■■□□ 2.15
UBE2D3-220ENST00000505307 BARGINQ6ZT62 677 aa28.48■■■□□ 2.15
UBE2D3-220ENST00000505307 NLRP6P59044 892 aa28.47■■■□□ 2.15
UBE2D3-220ENST00000505307 CAMTA1Q9Y6Y1 1673 aa28.45■■■□□ 2.15
UBE2D3-220ENST00000505307 THRAP3Q9Y2W1 955 aaKnown RBP28.44■■■□□ 2.14
UBE2D3-220ENST00000505307 LMO7Q8WWI1 1683 aa28.43■■■□□ 2.14
UBE2D3-220ENST00000505307 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
UBE2D3-220ENST00000505307 FAM196AQ6ZSG2 479 aa28.43■■■□□ 2.14
UBE2D3-220ENST00000505307 TCP11L2Q8N4U5 519 aa28.43■■■□□ 2.14
UBE2D3-220ENST00000505307 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
UBE2D3-220ENST00000505307 FAM182BQ5T319 152 aa28.42■■■□□ 2.14
UBE2D3-220ENST00000505307 LARP1Q6PKG0 1096 aaKnown RBP28.42■■■□□ 2.14
UBE2D3-220ENST00000505307 CARD11Q9BXL7 1154 aa28.41■■■□□ 2.14
UBE2D3-220ENST00000505307 AATKQ6ZMQ8 1374 aa28.4■■■□□ 2.14
UBE2D3-220ENST00000505307 TONSLQ96HA7 1378 aa28.4■■■□□ 2.14
UBE2D3-220ENST00000505307 SLIT3O75094 1523 aa28.39■■■□□ 2.14
UBE2D3-220ENST00000505307 PDE3BQ13370 1112 aa28.39■■■□□ 2.14
UBE2D3-220ENST00000505307 TTC21BQ7Z4L5 1316 aa28.39■■■□□ 2.13
UBE2D3-220ENST00000505307 TTC21AQ8NDW8 1320 aa28.39■■■□□ 2.13
UBE2D3-220ENST00000505307 RGPD1P0DJD0 1748 aa28.38■■■□□ 2.13
UBE2D3-220ENST00000505307 DISP2A7MBM2 1401 aa28.37■■■□□ 2.13
UBE2D3-220ENST00000505307 KCNH5Q8NCM2 988 aa28.37■■■□□ 2.13
UBE2D3-220ENST00000505307 COL5A2P05997 1499 aaPredicted RBP28.37■■■□□ 2.13
UBE2D3-220ENST00000505307 CPSF1Q10570 1443 aaKnown RBP28.36■■■□□ 2.13
UBE2D3-220ENST00000505307 EN1Q05925 392 aaPredicted RBP28.34■■■□□ 2.13
UBE2D3-220ENST00000505307 PIK3C2AO00443 1686 aa28.34■■■□□ 2.13
UBE2D3-220ENST00000505307 CRB1P82279 1406 aa28.34■■■□□ 2.13
UBE2D3-220ENST00000505307 ZBTB7CA1YPR0 619 aa28.33■■■□□ 2.13
UBE2D3-220ENST00000505307 C11orf95C9JLR9 678 aaPredicted RBP28.33■■■□□ 2.13
UBE2D3-220ENST00000505307 KTN1Q86UP2 1357 aaKnown RBP28.33■■■□□ 2.13
UBE2D3-220ENST00000505307 AKAP12Q02952 1782 aa28.32■■■□□ 2.12
UBE2D3-220ENST00000505307 TRIM26Q12899 539 aaPredicted RBP28.31■■■□□ 2.12
UBE2D3-220ENST00000505307 TRIM37O94972 964 aa28.3■■■□□ 2.12
UBE2D3-220ENST00000505307 ARHGEF25Q86VW2 580 aa28.3■■■□□ 2.12
UBE2D3-220ENST00000505307 PUS7Q96PZ0 661 aaKnown RBP28.29■■■□□ 2.12
UBE2D3-220ENST00000505307 PARD3Q8TEW0 1356 aa28.27■■■□□ 2.12
UBE2D3-220ENST00000505307 TOM1L2Q6ZVM7 507 aa28.27■■■□□ 2.12
UBE2D3-220ENST00000505307 TNS1Q9HBL0 1735 aaKnown RBP28.26■■■□□ 2.12
UBE2D3-220ENST00000505307 SLC24A1O60721 1099 aa28.26■■■□□ 2.11
UBE2D3-220ENST00000505307 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
UBE2D3-220ENST00000505307 PSDA5PKW4 1024 aaPredicted RBP28.25■■■□□ 2.11
UBE2D3-220ENST00000505307 APBA3O96018 575 aa28.25■■■□□ 2.11
UBE2D3-220ENST00000505307 PARP4Q9UKK3 1724 aaKnown RBP28.24■■■□□ 2.11
UBE2D3-220ENST00000505307 HDGFL2Q7Z4V5 671 aaPredicted RBP28.24■■■□□ 2.11
UBE2D3-220ENST00000505307 CAMKK2Q96RR4 588 aa28.24■■■□□ 2.11
UBE2D3-220ENST00000505307 CDCA7Q9BWT1 371 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms