RNA–Protein interactions for RNA: ENST00000505243.5

RPS3A-203, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-203ENST00000505243 VPS72Q15906 364 aa27.09■■□□□ 1.93
RPS3A-203ENST00000505243 TRPM1Q7Z4N2 1603 aa27.08■■□□□ 1.93
RPS3A-203ENST00000505243 CENPJQ9HC77 1338 aaPredicted RBP27.07■■□□□ 1.92
RPS3A-203ENST00000505243 QRICH2Q9H0J4 1663 aa27.07■■□□□ 1.92
RPS3A-203ENST00000505243 PAK3O75914 559 aaPredicted RBP27.06■■□□□ 1.92
RPS3A-203ENST00000505243 COL14A1Q05707 1796 aaKnown RBP27.06■■□□□ 1.92
RPS3A-203ENST00000505243 CCDC61Q9Y6R9 512 aa27.05■■□□□ 1.92
RPS3A-203ENST00000505243 ACEP12821 1306 aa27.05■■□□□ 1.92
RPS3A-203ENST00000505243 SRCAPQ6ZRS2 3230 aa27.04■■□□□ 1.92
RPS3A-203ENST00000505243 PLEKHG3A1L390 1219 aa27.04■■□□□ 1.92
RPS3A-203ENST00000505243 PHRF1Q9P1Y6 1649 aaKnown RBP27.04■■□□□ 1.92
RPS3A-203ENST00000505243 BRWD3Q6RI45 1802 aa27.04■■□□□ 1.92
RPS3A-203ENST00000505243 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
RPS3A-203ENST00000505243 NBPF8Q3BBV2 869 aa27.01■■□□□ 1.91
RPS3A-203ENST00000505243 BTG4Q9NY30 223 aa27.01■■□□□ 1.91
RPS3A-203ENST00000505243 ONECUT3O60422 494 aaPredicted RBP27■■□□□ 1.91
RPS3A-203ENST00000505243 CABP2Q9NPB3 220 aa27■■□□□ 1.91
RPS3A-203ENST00000505243 PPIP5K1Q6PFW1 1433 aa26.99■■□□□ 1.91
RPS3A-203ENST00000505243 SEPT12Q8IYM1 358 aa26.99■■□□□ 1.91
RPS3A-203ENST00000505243 SRPK2P78362 688 aaKnown RBP26.97■■□□□ 1.91
RPS3A-203ENST00000505243 NUTM2GQ5VZR2 741 aa26.97■■□□□ 1.91
RPS3A-203ENST00000505243 CCDC9Q9Y3X0 531 aaKnown RBP26.97■■□□□ 1.91
RPS3A-203ENST00000505243 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
RPS3A-203ENST00000505243 NRKQ7Z2Y5 1582 aa26.96■■□□□ 1.91
RPS3A-203ENST00000505243 ROCK2O75116 1388 aaKnown RBP26.95■■□□□ 1.9
RPS3A-203ENST00000505243 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
RPS3A-203ENST00000505243 USP19O94966 1318 aa26.91■■□□□ 1.9
RPS3A-203ENST00000505243 CHRNA2Q15822 529 aa26.91■■□□□ 1.9
RPS3A-203ENST00000505243 SPATA31A5Q5VU36 1347 aa26.9■■□□□ 1.9
RPS3A-203ENST00000505243 SPATA31A7Q8IWB4 1347 aa26.9■■□□□ 1.9
RPS3A-203ENST00000505243 FAM98CQ17RN3 349 aaKnown RBP26.9■■□□□ 1.9
RPS3A-203ENST00000505243 ZC3H6P61129 1189 aaKnown RBP26.89■■□□□ 1.9
RPS3A-203ENST00000505243 CCDC125Q86Z20 511 aa26.89■■□□□ 1.9
RPS3A-203ENST00000505243 CABP1Q9NZU7 370 aa26.89■■□□□ 1.9
RPS3A-203ENST00000505243 BLMP54132 1417 aaPredicted RBP26.89■■□□□ 1.89
RPS3A-203ENST00000505243 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.89
RPS3A-203ENST00000505243 ABTB2Q8N961 1025 aa26.88■■□□□ 1.89
RPS3A-203ENST00000505243 USP6P35125 1406 aa26.88■■□□□ 1.89
RPS3A-203ENST00000505243 KRT27Q7Z3Y8 459 aa26.87■■□□□ 1.89
RPS3A-203ENST00000505243 SSH2Q76I76 1423 aa26.86■■□□□ 1.89
RPS3A-203ENST00000505243 EVC2Q86UK5 1308 aa26.86■■□□□ 1.89
RPS3A-203ENST00000505243 LMO7Q8WWI1 1683 aa26.85■■□□□ 1.89
RPS3A-203ENST00000505243 CPDO75976 1380 aa26.84■■□□□ 1.89
RPS3A-203ENST00000505243 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
RPS3A-203ENST00000505243 CAMTA1Q9Y6Y1 1673 aa26.83■■□□□ 1.89
RPS3A-203ENST00000505243 SPATA31A1Q5TZJ5 1347 aa26.83■■□□□ 1.89
RPS3A-203ENST00000505243 A0A0G2JS52 829 aa26.82■■□□□ 1.88
RPS3A-203ENST00000505243 MYT1Q01538 1121 aa26.82■■□□□ 1.88
RPS3A-203ENST00000505243 PIK3C2AO00443 1686 aa26.82■■□□□ 1.88
RPS3A-203ENST00000505243 SLIT3O75094 1523 aa26.8■■□□□ 1.88
RPS3A-203ENST00000505243 DEFB132Q7Z7B7 95 aa26.8■■□□□ 1.88
RPS3A-203ENST00000505243 STRN4Q9NRL3 753 aa26.8■■□□□ 1.88
RPS3A-203ENST00000505243 GCP02774 474 aa26.79■■□□□ 1.88
RPS3A-203ENST00000505243 NLRP13Q86W25 1043 aa26.79■■□□□ 1.88
RPS3A-203ENST00000505243 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
RPS3A-203ENST00000505243 AKAP12Q02952 1782 aa26.78■■□□□ 1.88
RPS3A-203ENST00000505243 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
RPS3A-203ENST00000505243 FAM182BQ5T319 152 aa26.76■■□□□ 1.87
RPS3A-203ENST00000505243 CARD11Q9BXL7 1154 aa26.75■■□□□ 1.87
RPS3A-203ENST00000505243 CPSF1Q10570 1443 aaKnown RBP26.74■■□□□ 1.87
RPS3A-203ENST00000505243 TRIM26Q12899 539 aaPredicted RBP26.74■■□□□ 1.87
RPS3A-203ENST00000505243 LARP1Q6PKG0 1096 aaKnown RBP26.74■■□□□ 1.87
RPS3A-203ENST00000505243 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
RPS3A-203ENST00000505243 NLRP6P59044 892 aa26.73■■□□□ 1.87
RPS3A-203ENST00000505243 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
RPS3A-203ENST00000505243 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
RPS3A-203ENST00000505243 USP35Q9P2H5 1018 aa26.71■■□□□ 1.87
RPS3A-203ENST00000505243 CD163L1Q9NR16 1453 aa26.69■■□□□ 1.86
RPS3A-203ENST00000505243 COL18A1P39060 1754 aa26.69■■□□□ 1.86
RPS3A-203ENST00000505243 EVA1CP58658 441 aa26.69■■□□□ 1.86
RPS3A-203ENST00000505243 SF3B2Q13435 895 aaKnown RBP26.69■■□□□ 1.86
RPS3A-203ENST00000505243 MON2Q7Z3U7 1717 aa26.69■■□□□ 1.86
RPS3A-203ENST00000505243 RGPD1P0DJD0 1748 aa26.68■■□□□ 1.86
RPS3A-203ENST00000505243 BARGINQ6ZT62 677 aa26.68■■□□□ 1.86
RPS3A-203ENST00000505243 ZNF692Q9BU19 519 aaPredicted RBP26.68■■□□□ 1.86
RPS3A-203ENST00000505243 AATKQ6ZMQ8 1374 aa26.68■■□□□ 1.86
RPS3A-203ENST00000505243 TNS1Q9HBL0 1735 aaKnown RBP26.68■■□□□ 1.86
RPS3A-203ENST00000505243 TCP11L2Q8N4U5 519 aa26.65■■□□□ 1.86
RPS3A-203ENST00000505243 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
RPS3A-203ENST00000505243 NFAT5O94916 1531 aa26.65■■□□□ 1.86
RPS3A-203ENST00000505243 TTC21AQ8NDW8 1320 aa26.65■■□□□ 1.86
RPS3A-203ENST00000505243 ZBTB7CA1YPR0 619 aa26.64■■□□□ 1.86
RPS3A-203ENST00000505243 CRB1P82279 1406 aa26.63■■□□□ 1.85
RPS3A-203ENST00000505243 AXIN2Q9Y2T1 843 aa26.62■■□□□ 1.85
RPS3A-203ENST00000505243 DISP2A7MBM2 1401 aa26.62■■□□□ 1.85
RPS3A-203ENST00000505243 PARP4Q9UKK3 1724 aaKnown RBP26.62■■□□□ 1.85
RPS3A-203ENST00000505243 BAG6P46379 1132 aa26.61■■□□□ 1.85
RPS3A-203ENST00000505243 ARHGEF25Q86VW2 580 aa26.6■■□□□ 1.85
RPS3A-203ENST00000505243 THRAP3Q9Y2W1 955 aaKnown RBP26.6■■□□□ 1.85
RPS3A-203ENST00000505243 USP54Q70EL1 1684 aa26.6■■□□□ 1.85
RPS3A-203ENST00000505243 TESK2Q96S53 571 aa26.59■■□□□ 1.85
RPS3A-203ENST00000505243 EN1Q05925 392 aaPredicted RBP26.58■■□□□ 1.85
RPS3A-203ENST00000505243 USP31Q70CQ4 1352 aa26.58■■□□□ 1.84
RPS3A-203ENST00000505243 SOX12O15370 315 aa26.57■■□□□ 1.84
RPS3A-203ENST00000505243 FAM196AQ6ZSG2 479 aa26.57■■□□□ 1.84
RPS3A-203ENST00000505243 SLC12A5Q9H2X9 1139 aa26.57■■□□□ 1.84
RPS3A-203ENST00000505243 TRIM37O94972 964 aa26.56■■□□□ 1.84
RPS3A-203ENST00000505243 KCNH5Q8NCM2 988 aa26.56■■□□□ 1.84
RPS3A-203ENST00000505243 LRRC37A3O60309 1634 aa26.56■■□□□ 1.84
RPS3A-203ENST00000505243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms