RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
CCSER1-205ENST00000505073 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
CCSER1-205ENST00000505073 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
CCSER1-205ENST00000505073 NME9Q86XW9 330 aa17.38■□□□□ 0.37
CCSER1-205ENST00000505073 ZRANB1Q9UGI0 708 aa17.37■□□□□ 0.37
CCSER1-205ENST00000505073 FBLN1P23142 703 aa17.37■□□□□ 0.37
CCSER1-205ENST00000505073 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CCSER1-205ENST00000505073 APAF1O14727 1248 aa17.36■□□□□ 0.37
CCSER1-205ENST00000505073 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
CCSER1-205ENST00000505073 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
CCSER1-205ENST00000505073 ACEP12821 1306 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 ITSN1Q15811 1721 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
CCSER1-205ENST00000505073 NKTRP30414 1462 aaKnown RBP17.35■□□□□ 0.37
CCSER1-205ENST00000505073 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
CCSER1-205ENST00000505073 CHD2O14647 1828 aaKnown RBP17.34■□□□□ 0.37
CCSER1-205ENST00000505073 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
CCSER1-205ENST00000505073 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
CCSER1-205ENST00000505073 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
CCSER1-205ENST00000505073 RGPD8O14715 1765 aaPredicted RBP17.31■□□□□ 0.36
CCSER1-205ENST00000505073 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
CCSER1-205ENST00000505073 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCSER1-205ENST00000505073 RTL5Q5HYW3 569 aaPredicted RBP17.31■□□□□ 0.36
CCSER1-205ENST00000505073 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
CCSER1-205ENST00000505073 COG3Q96JB2 828 aa17.3■□□□□ 0.36
CCSER1-205ENST00000505073 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
CCSER1-205ENST00000505073 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
CCSER1-205ENST00000505073 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
CCSER1-205ENST00000505073 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
CCSER1-205ENST00000505073 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
CCSER1-205ENST00000505073 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
CCSER1-205ENST00000505073 USP6P35125 1406 aa17.28■□□□□ 0.36
CCSER1-205ENST00000505073 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
CCSER1-205ENST00000505073 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
CCSER1-205ENST00000505073 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
CCSER1-205ENST00000505073 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
CCSER1-205ENST00000505073 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
CCSER1-205ENST00000505073 NALCNQ8IZF0 1738 aa17.27■□□□□ 0.35
CCSER1-205ENST00000505073 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
CCSER1-205ENST00000505073 NRKQ7Z2Y5 1582 aa17.26■□□□□ 0.35
CCSER1-205ENST00000505073 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
CCSER1-205ENST00000505073 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
CCSER1-205ENST00000505073 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
CCSER1-205ENST00000505073 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
CCSER1-205ENST00000505073 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
CCSER1-205ENST00000505073 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
CCSER1-205ENST00000505073 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
CCSER1-205ENST00000505073 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
CCSER1-205ENST00000505073 HSPA2P54652 639 aa17.24■□□□□ 0.35
CCSER1-205ENST00000505073 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
CCSER1-205ENST00000505073 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
CCSER1-205ENST00000505073 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
CCSER1-205ENST00000505073 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
CCSER1-205ENST00000505073 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
CCSER1-205ENST00000505073 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
CCSER1-205ENST00000505073 KDM4FA0A1W2PPD8 638 aa17.23■□□□□ 0.35
CCSER1-205ENST00000505073 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
CCSER1-205ENST00000505073 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
CCSER1-205ENST00000505073 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
CCSER1-205ENST00000505073 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
CCSER1-205ENST00000505073 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
CCSER1-205ENST00000505073 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
CCSER1-205ENST00000505073 SOX12O15370 315 aa17.2■□□□□ 0.34
CCSER1-205ENST00000505073 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
CCSER1-205ENST00000505073 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
CCSER1-205ENST00000505073 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
CCSER1-205ENST00000505073 TTC21AQ8NDW8 1320 aa17.19■□□□□ 0.34
CCSER1-205ENST00000505073 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
CCSER1-205ENST00000505073 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
CCSER1-205ENST00000505073 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
CCSER1-205ENST00000505073 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
CCSER1-205ENST00000505073 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
CCSER1-205ENST00000505073 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
CCSER1-205ENST00000505073 IL13P35225 146 aa17.17■□□□□ 0.34
CCSER1-205ENST00000505073 E9PSI1 815 aa17.16■□□□□ 0.34
CCSER1-205ENST00000505073 HMOX1P09601 288 aa17.16■□□□□ 0.34
CCSER1-205ENST00000505073 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
CCSER1-205ENST00000505073 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
CCSER1-205ENST00000505073 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
CCSER1-205ENST00000505073 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
CCSER1-205ENST00000505073 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
CCSER1-205ENST00000505073 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.34
CCSER1-205ENST00000505073 PIK3C2AO00443 1686 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
CCSER1-205ENST00000505073 NLRP6P59044 892 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 PLIN1O60240 522 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 FCHSD2O94868 740 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 PRKAR2BP31323 418 aa17.14■□□□□ 0.33
CCSER1-205ENST00000505073 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
CCSER1-205ENST00000505073 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
CCSER1-205ENST00000505073 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
CCSER1-205ENST00000505073 WDR63Q8IWG1 891 aa17.12■□□□□ 0.33
CCSER1-205ENST00000505073 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
CCSER1-205ENST00000505073 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
CCSER1-205ENST00000505073 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
CCSER1-205ENST00000505073 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms