RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 LILRB3O75022 631 aa6.58□□□□□ -1.36
RFC1-209ENST00000504974 DGAT1O75907 488 aa6.58□□□□□ -1.36
RFC1-209ENST00000504974 SMPD1P17405 629 aa6.58□□□□□ -1.36
RFC1-209ENST00000504974 SKIV2LQ15477 1246 aaKnown RBP6.58□□□□□ -1.36
RFC1-209ENST00000504974 DIXDC1Q155Q3 683 aa6.58□□□□□ -1.36
RFC1-209ENST00000504974 AAASQ9NRG9 546 aa6.58□□□□□ -1.36
RFC1-209ENST00000504974 CLK2P49760 499 aaKnown RBP6.57□□□□□ -1.36
RFC1-209ENST00000504974 KCNH2Q12809 1159 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 PTPRNQ16849 979 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 LYPD8Q6UX82 237 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 C14orf37Q86TY3 774 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 HPS1Q92902 700 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 GOPCQ9HD26 462 aa6.57□□□□□ -1.36
RFC1-209ENST00000504974 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
RFC1-209ENST00000504974 TIMELESSQ9UNS1 1208 aa6.56□□□□□ -1.36
RFC1-209ENST00000504974 SPDYE5A6NIY4 337 aa6.55□□□□□ -1.36
RFC1-209ENST00000504974 ALDH1A1P00352 501 aa6.55□□□□□ -1.36
RFC1-209ENST00000504974 GJA5P36382 358 aa6.55□□□□□ -1.36
RFC1-209ENST00000504974 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
RFC1-209ENST00000504974 SNIP1Q8TAD8 396 aaKnown RBP6.55□□□□□ -1.36
RFC1-209ENST00000504974 SIAH2O43255 324 aa6.54□□□□□ -1.36
RFC1-209ENST00000504974 EHBP1Q8NDI1 1231 aa6.54□□□□□ -1.36
RFC1-209ENST00000504974 FOXJ1Q92949 421 aa6.54□□□□□ -1.36
RFC1-209ENST00000504974 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
RFC1-209ENST00000504974 F12P00748 615 aaPredicted RBP6.53□□□□□ -1.36
RFC1-209ENST00000504974 WNT7BP56706 349 aa6.53□□□□□ -1.36
RFC1-209ENST00000504974 PRPF38BQ5VTL8 546 aaKnown RBP6.53□□□□□ -1.36
RFC1-209ENST00000504974 DESI1Q6ICB0 168 aa6.53□□□□□ -1.36
RFC1-209ENST00000504974 ZNF511Q8NB15 262 aa6.53□□□□□ -1.36
RFC1-209ENST00000504974 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
RFC1-209ENST00000504974 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
RFC1-209ENST00000504974 GMPR2Q9P2T1 348 aaKnown RBP6.52□□□□□ -1.37
RFC1-209ENST00000504974 AXIN1O15169 862 aa6.5□□□□□ -1.37
RFC1-209ENST00000504974 AVPP01185 164 aa6.5□□□□□ -1.37
RFC1-209ENST00000504974 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
RFC1-209ENST00000504974 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFC1-209ENST00000504974 TUSC1Q2TAM9 212 aa6.49□□□□□ -1.37
RFC1-209ENST00000504974 ERICH6Q7L0X2 663 aa6.49□□□□□ -1.37
RFC1-209ENST00000504974 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
RFC1-209ENST00000504974 AP1G2O75843 785 aa6.48□□□□□ -1.37
RFC1-209ENST00000504974 RFC5P40937 340 aa6.48□□□□□ -1.37
RFC1-209ENST00000504974 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
RFC1-209ENST00000504974 AGERQ15109 404 aa6.48□□□□□ -1.37
RFC1-209ENST00000504974 NR6A1Q15406 480 aa6.48□□□□□ -1.37
RFC1-209ENST00000504974 BMP1P13497 986 aa6.47□□□□□ -1.37
RFC1-209ENST00000504974 HELBQ8NG08 1087 aaPredicted RBP6.47□□□□□ -1.37
RFC1-209ENST00000504974 HMX1Q9NP08 348 aaPredicted RBP6.47□□□□□ -1.37
RFC1-209ENST00000504974 SNRPBP14678 240 aaKnown RBP6.46□□□□□ -1.38
RFC1-209ENST00000504974 FLIIQ13045 1269 aa6.46□□□□□ -1.38
RFC1-209ENST00000504974 WASF2Q9Y6W5 498 aa6.46□□□□□ -1.38
RFC1-209ENST00000504974 MAGEB6P1A0A0J9YX57 407 aa6.45□□□□□ -1.38
RFC1-209ENST00000504974 CRIPAKQ8N1N5 446 aa6.45□□□□□ -1.38
RFC1-209ENST00000504974 CARD14Q9BXL6 1004 aa6.45□□□□□ -1.38
RFC1-209ENST00000504974 ATP13A2Q9NQ11 1180 aa6.45□□□□□ -1.38
RFC1-209ENST00000504974 C11orf95C9JLR9 678 aaPredicted RBP6.44□□□□□ -1.38
RFC1-209ENST00000504974 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
RFC1-209ENST00000504974 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
RFC1-209ENST00000504974 NNTQ13423 1086 aa6.44□□□□□ -1.38
RFC1-209ENST00000504974 PPP2R2DQ66LE6 453 aa6.44□□□□□ -1.38
RFC1-209ENST00000504974 NR3C2P08235 984 aa6.43□□□□□ -1.38
RFC1-209ENST00000504974 UBTFP17480 764 aaKnown RBP6.43□□□□□ -1.38
RFC1-209ENST00000504974 MCM6Q14566 821 aa6.43□□□□□ -1.38
RFC1-209ENST00000504974 CTC1Q2NKJ3 1217 aa6.43□□□□□ -1.38
RFC1-209ENST00000504974 TMEM259Q4ZIN3 620 aa6.43□□□□□ -1.38
RFC1-209ENST00000504974 TRIM46Q7Z4K8 759 aa6.43□□□□□ -1.38
RFC1-209ENST00000504974 CAPN5O15484 640 aaPredicted RBP6.42□□□□□ -1.38
RFC1-209ENST00000504974 GRM5P41594 1212 aa6.42□□□□□ -1.38
RFC1-209ENST00000504974 OCSTAMPQ9BR26 566 aa6.42□□□□□ -1.38
RFC1-209ENST00000504974 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
RFC1-209ENST00000504974 SNRKQ9NRH2 765 aa6.42□□□□□ -1.38
RFC1-209ENST00000504974 USP17L8P0C7I0 530 aa6.41□□□□□ -1.38
RFC1-209ENST00000504974 SH3BP5LQ7L8J4 393 aa6.41□□□□□ -1.38
RFC1-209ENST00000504974 SH3RF1Q7Z6J0 888 aa6.41□□□□□ -1.38
RFC1-209ENST00000504974 FAM174AQ8TBP5 190 aa6.41□□□□□ -1.38
RFC1-209ENST00000504974 TIMP2P16035 220 aa6.4□□□□□ -1.38
RFC1-209ENST00000504974 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
RFC1-209ENST00000504974 BPHLQ86WA6 291 aaPredicted RBP6.4□□□□□ -1.38
RFC1-209ENST00000504974 BANK1Q8NDB2 785 aa6.4□□□□□ -1.38
RFC1-209ENST00000504974 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
RFC1-209ENST00000504974 ITPKCQ96DU7 683 aa6.4□□□□□ -1.38
RFC1-209ENST00000504974 SOBPA7XYQ1 873 aa6.39□□□□□ -1.39
RFC1-209ENST00000504974 SUPT5HO00267 1087 aaKnown RBP6.39□□□□□ -1.39
RFC1-209ENST00000504974 ADH1CP00326 375 aa6.39□□□□□ -1.39
RFC1-209ENST00000504974 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
RFC1-209ENST00000504974 KLF16Q9BXK1 252 aaPredicted RBP6.39□□□□□ -1.39
RFC1-209ENST00000504974 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
RFC1-209ENST00000504974 FKBPLQ9UIM3 349 aa6.39□□□□□ -1.39
RFC1-209ENST00000504974 RAD21O60216 631 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 FSHRP23945 695 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 VASH1Q7L8A9 365 aaPredicted RBP6.38□□□□□ -1.39
RFC1-209ENST00000504974 MTMR14Q8NCE2 650 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 POM121Q96HA1 1249 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 ZFP42Q96MM3 310 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 CDK15Q96Q40 435 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 C1QTNF2Q9BXJ5 285 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 TRIM34Q9BYJ4 488 aa6.38□□□□□ -1.39
RFC1-209ENST00000504974 ZIC2O95409 532 aaPredicted RBP6.37□□□□□ -1.39
RFC1-209ENST00000504974 VEGFBP49765 207 aa6.37□□□□□ -1.39
RFC1-209ENST00000504974 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
RFC1-209ENST00000504974 NBPF14Q5TI25 921 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms