RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-208	ENST00000504971	CROCC2	H7BZ55	1655 aa		9.21	□□□□□ -0.93
FBXO38-208	ENST00000504971	ITGAE	P38570	1179 aa		9.21	□□□□□ -0.94
FBXO38-208	ENST00000504971	BRPF1	P55201	1214 aa	Predicted RBP	9.21	□□□□□ -0.94
FBXO38-208	ENST00000504971	RGS22	Q8NE09	1264 aa		9.21	□□□□□ -0.94
FBXO38-208	ENST00000504971	ABCA9	Q8IUA7	1624 aa		9.2	□□□□□ -0.94
FBXO38-208	ENST00000504971	RBM25	P49756	843 aa	Known RBP	9.2	□□□□□ -0.94
FBXO38-208	ENST00000504971	CERS3	Q8IU89	383 aa		9.2	□□□□□ -0.94
FBXO38-208	ENST00000504971	USP35	Q9P2H5	1018 aa		9.2	□□□□□ -0.94
FBXO38-208	ENST00000504971		E9PSI1	815 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	KCNC4	Q03721	635 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	EN1	Q05925	392 aa	Predicted RBP	9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	PDIA6	Q15084	440 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	DDX12P	Q92771	950 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	RBM33	Q96EV2	1170 aa	Known RBP	9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	TSR3	Q9UJK0	312 aa	Known RBP	9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	ZNF644	Q9H582	1327 aa	Predicted RBP	9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	ASXL2	Q76L83	1435 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	MBD5	Q9P267	1494 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	SAMD9L	Q8IVG5	1584 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	RIMBP3C	A6NJZ7	1639 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	RIMBP3B	A6NNM3	1639 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	RIMBP3	Q9UFD9	1639 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971	ADGB	Q8N7X0	1667 aa		9.19	□□□□□ -0.94
FBXO38-208	ENST00000504971		A0A0U1RQG5	324 aa	Predicted RBP	9.18	□□□□□ -0.94
FBXO38-208	ENST00000504971	PPM1G	O15355	546 aa	Predicted RBP	9.18	□□□□□ -0.94
FBXO38-208	ENST00000504971	NEFM	P07197	916 aa		9.18	□□□□□ -0.94
FBXO38-208	ENST00000504971	MAST1	Q9Y2H9	1570 aa		9.18	□□□□□ -0.94
FBXO38-208	ENST00000504971	MAPKBP1	O60336	1514 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	ARHGAP5	Q13017	1502 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	NCOA1	Q15788	1441 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	TEX2	Q8IWB9	1127 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	FAM177A1	Q8N128	213 aa	Predicted RBP	9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	LRCH3	Q96II8	777 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	TSKS	Q9UJT2	592 aa		9.17	□□□□□ -0.94
FBXO38-208	ENST00000504971	CCDC141	Q6ZP82	1450 aa		9.16	□□□□□ -0.94
FBXO38-208	ENST00000504971	MCC	P23508	829 aa		9.16	□□□□□ -0.94
FBXO38-208	ENST00000504971	EFCAB2	Q5VUJ9	269 aa		9.16	□□□□□ -0.94
FBXO38-208	ENST00000504971	BRPF3	Q9ULD4	1205 aa		9.16	□□□□□ -0.94
FBXO38-208	ENST00000504971	HPS5	Q9UPZ3	1129 aa		9.16	□□□□□ -0.94
FBXO38-208	ENST00000504971	ANKRD30A	Q9BXX3	1397 aa		9.15	□□□□□ -0.94
FBXO38-208	ENST00000504971	CANX	P27824	592 aa	Known RBP	9.15	□□□□□ -0.94
FBXO38-208	ENST00000504971	TSR1	Q2NL82	804 aa	Known RBP	9.15	□□□□□ -0.94
FBXO38-208	ENST00000504971	PTMA	P06454	111 aa	Known RBP	9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	TMCO4	Q5TGY1	634 aa		9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	PACS2	Q86VP3	889 aa		9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	CWC22	Q9HCG8	908 aa	Known RBP	9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	MTMR7	Q9Y216	660 aa		9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	ABCC1	P33527	1531 aa		9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	C9orf84	Q5VXU9	1444 aa		9.14	□□□□□ -0.95
FBXO38-208	ENST00000504971	SPDYE16	A6NNV3	312 aa	Predicted RBP	9.13	□□□□□ -0.95
FBXO38-208	ENST00000504971	TSPY4	P0CV99	314 aa		9.13	□□□□□ -0.95
FBXO38-208	ENST00000504971	TSPY10	P0CW01	314 aa		9.13	□□□□□ -0.95
FBXO38-208	ENST00000504971	RBM10	P98175	930 aa	Known RBP	9.13	□□□□□ -0.95
FBXO38-208	ENST00000504971	PLXNC1	O60486	1568 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	GLI2	P10070	1586 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	SYCP2	Q9BX26	1530 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	MAP3K7	O43318	606 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	RRP7BP	Q9NSQ0	103 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	CHIC2	Q9UKJ5	165 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	ARIH1	Q9Y4X5	557 aa	Predicted RBP	9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	CFAP74	Q9C0B2	1584 aa		9.12	□□□□□ -0.95
FBXO38-208	ENST00000504971	MAFG	O15525	162 aa		9.11	□□□□□ -0.95
FBXO38-208	ENST00000504971	PRIM1	P49642	420 aa	Known RBP	9.11	□□□□□ -0.95
FBXO38-208	ENST00000504971	HNRNPM	P52272	730 aa	Known RBP eCLIP	9.11	□□□□□ -0.95
FBXO38-208	ENST00000504971	FAM198A	Q9UFP1	575 aa		9.11	□□□□□ -0.95
FBXO38-208	ENST00000504971	RTEL1-TNFRSF6B	F6WH68	1400 aa		9.11	□□□□□ -0.95
FBXO38-208	ENST00000504971	ARHGEF12	Q9NZN5	1544 aa		9.1	□□□□□ -0.95
FBXO38-208	ENST00000504971	FANCA	O15360	1455 aa		9.1	□□□□□ -0.95
FBXO38-208	ENST00000504971	CDCA7L	Q96GN5	454 aa		9.1	□□□□□ -0.95
FBXO38-208	ENST00000504971	KDM6B	O15054	1643 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	ANKRD50	Q9ULJ7	1429 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	PRSS12	P56730	875 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	NEUROD2	Q15784	382 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	TJAP1	Q5JTD0	557 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	CYB5RL	Q6IPT4	315 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	KDM5D	Q9BY66	1539 aa		9.09	□□□□□ -0.95
FBXO38-208	ENST00000504971	NEO1	Q92859	1461 aa		9.08	□□□□□ -0.96
FBXO38-208	ENST00000504971	CD109	Q6YHK3	1445 aa		9.08	□□□□□ -0.96
FBXO38-208	ENST00000504971	GRIPAP1	Q4V328	841 aa		9.08	□□□□□ -0.96
FBXO38-208	ENST00000504971	CERK	Q8TCT0	537 aa		9.08	□□□□□ -0.96
FBXO38-208	ENST00000504971	MAP3K4	Q9Y6R4	1608 aa		9.08	□□□□□ -0.96
FBXO38-208	ENST00000504971	DUOX2	Q9NRD8	1548 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	C3orf80	F5H4A9	247 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	PPP4C	P60510	307 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	IRX6	P78412	446 aa	Predicted RBP	9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	CCDC27	Q2M243	656 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971		Q6ZNB5	142 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	KIF15	Q9NS87	1388 aa		9.07	□□□□□ -0.96
FBXO38-208	ENST00000504971	TRAPPC8	Q9Y2L5	1435 aa		9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	SAMD7	Q7Z3H4	446 aa		9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	TRAIP	Q9BWF2	469 aa		9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	C1orf115	Q9H7X2	142 aa		9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	DENND4B	O75064	1496 aa	Predicted RBP	9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	ADGRL1	O94910	1474 aa		9.06	□□□□□ -0.96
FBXO38-208	ENST00000504971	ERBIN	Q96RT1	1412 aa		9.05	□□□□□ -0.96
FBXO38-208	ENST00000504971	INO80	Q9ULG1	1556 aa	Predicted RBP	9.05	□□□□□ -0.96
FBXO38-208	ENST00000504971	SMAP	O00193	183 aa		9.05	□□□□□ -0.96
FBXO38-208	ENST00000504971	LCE2B	O14633	110 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms